RNA–Protein interactions for RNA: ENST00000425836.6

VEGFA-209, Transcript of vascular endothelial growth factor A, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene VEGFA, Length 1,575 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VEGFA-209ENST00000425836 OARD1Q9Y530 152 aa23.65■■□□□ 1.38
VEGFA-209ENST00000425836 PTPRBP23467 1997 aa23.64■■□□□ 1.38
VEGFA-209ENST00000425836 ZNF839A8K0R7 811 aa23.64■■□□□ 1.37
VEGFA-209ENST00000425836 CTIFO43310 598 aaKnown RBP23.64■■□□□ 1.37
VEGFA-209ENST00000425836 MPOP05164 745 aa23.64■■□□□ 1.37
VEGFA-209ENST00000425836 CDH3P22223 829 aa23.64■■□□□ 1.37
VEGFA-209ENST00000425836 RASA2Q15283 850 aa23.64■■□□□ 1.37
VEGFA-209ENST00000425836 OR4D1Q15615 310 aa23.64■■□□□ 1.37
VEGFA-209ENST00000425836 C3orf38Q5JPI3 329 aa23.64■■□□□ 1.37
VEGFA-209ENST00000425836 SUSD1Q6UWL2 747 aa23.64■■□□□ 1.37
VEGFA-209ENST00000425836 ISCA2Q86U28 154 aa23.64■■□□□ 1.37
VEGFA-209ENST00000425836 FBXO39Q8N4B4 442 aa23.64■■□□□ 1.37
VEGFA-209ENST00000425836 MZB1Q8WU39 189 aa23.64■■□□□ 1.37
VEGFA-209ENST00000425836 NRSN2Q9GZP1 204 aa23.64■■□□□ 1.37
VEGFA-209ENST00000425836 AKAP7Q9P0M2 348 aaPredicted RBP23.64■■□□□ 1.37
VEGFA-209ENST00000425836 PABPN1LA6NDY0 278 aaKnown RBP23.63■■□□□ 1.37
VEGFA-209ENST00000425836 TRABD2BA6NFA1 517 aa23.63■■□□□ 1.37
VEGFA-209ENST00000425836 SMIM23A6NLE4 172 aa23.63■■□□□ 1.37
VEGFA-209ENST00000425836 GUCA1CO95843 209 aa23.63■■□□□ 1.37
VEGFA-209ENST00000425836 HGFP14210 728 aa23.63■■□□□ 1.37
VEGFA-209ENST00000425836 OAS2P29728 719 aaKnown RBP23.63■■□□□ 1.37
VEGFA-209ENST00000425836 SLC5A12Q1EHB4 618 aa23.63■■□□□ 1.37
VEGFA-209ENST00000425836 FAM83EQ2M2I3 478 aa23.63■■□□□ 1.37
VEGFA-209ENST00000425836 FAM20CQ8IXL6 584 aa23.63■■□□□ 1.37
VEGFA-209ENST00000425836 CNPY4Q8N129 248 aa23.63■■□□□ 1.37
VEGFA-209ENST00000425836 SLC41A2Q96JW4 573 aa23.63■■□□□ 1.37
VEGFA-209ENST00000425836 OCIAD1Q9NX40 245 aa23.63■■□□□ 1.37
VEGFA-209ENST00000425836 EURLQ9NYK6 297 aa23.63■■□□□ 1.37
VEGFA-209ENST00000425836 CCDC151A5D8V7 595 aa23.62■■□□□ 1.37
VEGFA-209ENST00000425836 SLC9B1P1A6NJY1 282 aa23.62■■□□□ 1.37
VEGFA-209ENST00000425836 PLD2O14939 933 aa23.62■■□□□ 1.37
VEGFA-209ENST00000425836 KLHL2O95198 593 aa23.62■■□□□ 1.37
VEGFA-209ENST00000425836 CCL4P13236 92 aa23.62■■□□□ 1.37
VEGFA-209ENST00000425836 PVRP15151 417 aa23.62■■□□□ 1.37
VEGFA-209ENST00000425836 ST6GAL1P15907 406 aa23.62■■□□□ 1.37
VEGFA-209ENST00000425836 TFEBP19484 476 aa23.62■■□□□ 1.37
VEGFA-209ENST00000425836 PSMB5P28074 263 aa23.62■■□□□ 1.37
VEGFA-209ENST00000425836 KCNC1P48547 511 aa23.62■■□□□ 1.37
VEGFA-209ENST00000425836 SF1Q15637 639 aaKnown RBP23.62■■□□□ 1.37
VEGFA-209ENST00000425836 ZXDCQ2QGD7 858 aaPredicted RBP23.62■■□□□ 1.37
VEGFA-209ENST00000425836 AGTRAPQ6RW13 159 aa23.62■■□□□ 1.37
VEGFA-209ENST00000425836 FRA10AC1Q70Z53 315 aa23.62■■□□□ 1.37
VEGFA-209ENST00000425836 KMT5CQ86Y97 462 aa23.62■■□□□ 1.37
VEGFA-209ENST00000425836 CYP4X1Q8N118 509 aa23.62■■□□□ 1.37
VEGFA-209ENST00000425836 PLD6Q8N2A8 252 aaKnown RBP23.62■■□□□ 1.37
VEGFA-209ENST00000425836 OR2A1Q8NGT9 310 aa23.62■■□□□ 1.37
VEGFA-209ENST00000425836 FBXL8Q96CD0 374 aa23.62■■□□□ 1.37
VEGFA-209ENST00000425836 PRR11Q96HE9 360 aaPredicted RBP23.62■■□□□ 1.37
VEGFA-209ENST00000425836 GPR78Q96P69 363 aa23.62■■□□□ 1.37
VEGFA-209ENST00000425836 TRAPPC9Q96Q05 1148 aa23.62■■□□□ 1.37
VEGFA-209ENST00000425836 ALG9Q9H6U8 611 aa23.62■■□□□ 1.37
VEGFA-209ENST00000425836 POLR1BQ9H9Y6 1135 aa23.62■■□□□ 1.37
VEGFA-209ENST00000425836 PLAAQ9Y263 795 aa23.62■■□□□ 1.37
VEGFA-209ENST00000425836 CDH16O75309 829 aa23.61■■□□□ 1.37
VEGFA-209ENST00000425836 ERLIN1O75477 346 aa23.61■■□□□ 1.37
VEGFA-209ENST00000425836 ZBTB11O95625 1053 aaPredicted RBP23.61■■□□□ 1.37
VEGFA-209ENST00000425836 NELFEP18615 380 aaKnown RBP23.61■■□□□ 1.37
VEGFA-209ENST00000425836 CDKL1Q00532 357 aa23.61■■□□□ 1.37
VEGFA-209ENST00000425836 IFFO1Q0D2I5 559 aa23.61■■□□□ 1.37
VEGFA-209ENST00000425836 TSTA3Q13630 321 aaPredicted RBP23.61■■□□□ 1.37
VEGFA-209ENST00000425836 TGFBIQ15582 683 aa23.61■■□□□ 1.37
VEGFA-209ENST00000425836 FOXR1Q6PIV2 292 aa23.61■■□□□ 1.37
VEGFA-209ENST00000425836 GPSM1Q86YR5 675 aa23.61■■□□□ 1.37
VEGFA-209ENST00000425836 STAG3L4Q8TBR4 150 aa23.61■■□□□ 1.37
VEGFA-209ENST00000425836 KLHL25Q9H0H3 589 aa23.61■■□□□ 1.37
VEGFA-209ENST00000425836 ATG10Q9H0Y0 220 aa23.61■■□□□ 1.37
VEGFA-209ENST00000425836 PCDHB11Q9Y5F2 797 aa23.61■■□□□ 1.37
VEGFA-209ENST00000425836 PCDHGA8Q9Y5G5 932 aa23.61■■□□□ 1.37
VEGFA-209ENST00000425836 A0A0J9YY10 115 aa23.61■■□□□ 1.37
VEGFA-209ENST00000425836 TLDC2A0PJX2 215 aa23.61■■□□□ 1.37
VEGFA-209ENST00000425836 EFCAB7A8K855 629 aa23.61■■□□□ 1.37
VEGFA-209ENST00000425836 FGF3P11487 239 aaPredicted RBP23.61■■□□□ 1.37
VEGFA-209ENST00000425836 GABREP78334 506 aa23.61■■□□□ 1.37
VEGFA-209ENST00000425836 HSD11B2P80365 405 aa23.61■■□□□ 1.37
VEGFA-209ENST00000425836 RTP5Q14D33 572 aa23.61■■□□□ 1.37
VEGFA-209ENST00000425836 ACAP2Q15057 778 aa23.61■■□□□ 1.37
VEGFA-209ENST00000425836 BMPERQ8N8U9 685 aa23.61■■□□□ 1.37
VEGFA-209ENST00000425836 ACAT2Q9BWD1 397 aa23.61■■□□□ 1.37
VEGFA-209ENST00000425836 ZNF358Q9NW07 568 aa23.61■■□□□ 1.37
VEGFA-209ENST00000425836 JMJD7P0C870 316 aa23.6■■□□□ 1.37
VEGFA-209ENST00000425836 COL6A2P12110 1019 aa23.6■■□□□ 1.37
VEGFA-209ENST00000425836 ITIH1P19827 911 aa23.6■■□□□ 1.37
VEGFA-209ENST00000425836 RPA3P35244 121 aaPredicted RBP23.6■■□□□ 1.37
VEGFA-209ENST00000425836 ETV5P41161 510 aa23.6■■□□□ 1.37
VEGFA-209ENST00000425836 GLRBP48167 497 aa23.6■■□□□ 1.37
VEGFA-209ENST00000425836 NAE1Q13564 534 aa23.6■■□□□ 1.37
VEGFA-209ENST00000425836 CLEC14AQ86T13 490 aa23.6■■□□□ 1.37
VEGFA-209ENST00000425836 FAM129CQ86XR2 697 aa23.6■■□□□ 1.37
VEGFA-209ENST00000425836 D2HGDHQ8N465 521 aa23.6■■□□□ 1.37
VEGFA-209ENST00000425836 MYRIPQ8NFW9 859 aa23.6■■□□□ 1.37
VEGFA-209ENST00000425836 ATL1Q8WXF7 558 aa23.6■■□□□ 1.37
VEGFA-209ENST00000425836 CABS1Q96KC9 395 aa23.6■■□□□ 1.37
VEGFA-209ENST00000425836 ATOH8Q96SQ7 321 aa23.6■■□□□ 1.37
VEGFA-209ENST00000425836 MIPEPQ99797 713 aa23.6■■□□□ 1.37
VEGFA-209ENST00000425836 ROPN1BQ9BZX4 212 aaPredicted RBP23.6■■□□□ 1.37
VEGFA-209ENST00000425836 ROPN1Q9HAT0 212 aaPredicted RBP23.6■■□□□ 1.37
VEGFA-209ENST00000425836 SIDT1Q9NXL6 827 aaKnown RBP23.6■■□□□ 1.37
VEGFA-209ENST00000425836 PISDQ9UG56 409 aa23.6■■□□□ 1.37
VEGFA-209ENST00000425836 RNF112Q9ULX5 631 aa23.6■■□□□ 1.37
VEGFA-209ENST00000425836 KLHL20Q9Y2M5 609 aa23.6■■□□□ 1.37
Retrieved 100 of 20,778 RNA–protein pairs in 23.5 ms