RNA–Protein interactions for RNA: ENST00000420820.6

CROCCP3-202, Transcript of ciliary rootlet coiled-coil, rootletin pseudogene 3, humanhuman

BASIC

Gene CROCCP3, Length 1,947 nt, Biotype transcribed unprocessed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CROCCP3-202ENST00000420820 LSAMPQ13449 338 aa18.43■□□□□ 0.54
CROCCP3-202ENST00000420820 DHCR24Q15392 516 aa18.43■□□□□ 0.54
CROCCP3-202ENST00000420820 KCTD21Q4G0X4 260 aa18.43■□□□□ 0.54
CROCCP3-202ENST00000420820 LDLRAP1Q5SW96 308 aa18.43■□□□□ 0.54
CROCCP3-202ENST00000420820 FRG2Q64ET8 278 aa18.43■□□□□ 0.54
CROCCP3-202ENST00000420820 ZFP28Q8NHY6 868 aa18.43■□□□□ 0.54
CROCCP3-202ENST00000420820 FRG2BQ96QU4 278 aa18.43■□□□□ 0.54
CROCCP3-202ENST00000420820 CPPED1Q9BRF8 314 aaPredicted RBP18.43■□□□□ 0.54
CROCCP3-202ENST00000420820 OSBPL6Q9BZF3 934 aa18.43■□□□□ 0.54
CROCCP3-202ENST00000420820 CARS2Q9HA77 564 aaKnown RBP18.43■□□□□ 0.54
CROCCP3-202ENST00000420820 CLK4Q9HAZ1 481 aaKnown RBP18.43■□□□□ 0.54
CROCCP3-202ENST00000420820 SMPD3Q9NY59 655 aaPredicted RBP18.43■□□□□ 0.54
CROCCP3-202ENST00000420820 NIPSNAP3AQ9UFN0 247 aaPredicted RBP18.43■□□□□ 0.54
CROCCP3-202ENST00000420820 C16orf96A6NNT2 1141 aa18.42■□□□□ 0.54
CROCCP3-202ENST00000420820 ARHGEF33A8MVX0 844 aa18.42■□□□□ 0.54
CROCCP3-202ENST00000420820 MT-ND1P03886 318 aa18.42■□□□□ 0.54
CROCCP3-202ENST00000420820 ASLP04424 464 aa18.42■□□□□ 0.54
CROCCP3-202ENST00000420820 CEBPBP17676 345 aa18.42■□□□□ 0.54
CROCCP3-202ENST00000420820 AMD1P17707 334 aa18.42■□□□□ 0.54
CROCCP3-202ENST00000420820 NELFEP18615 380 aaKnown RBP18.42■□□□□ 0.54
CROCCP3-202ENST00000420820 ITPKAP23677 461 aa18.42■□□□□ 0.54
CROCCP3-202ENST00000420820 TACR1P25103 407 aa18.42■□□□□ 0.54
CROCCP3-202ENST00000420820 RPS9P46781 194 aaKnown RBP18.42■□□□□ 0.54
CROCCP3-202ENST00000420820 NRIP1P48552 1158 aa18.42■□□□□ 0.54
CROCCP3-202ENST00000420820 UBE3AQ05086 875 aa18.42■□□□□ 0.54
CROCCP3-202ENST00000420820 PPIGQ13427 754 aaKnown RBP eCLIP18.42■□□□□ 0.545e-7■■■■□ 21.6
CROCCP3-202ENST00000420820 FAM98BQ52LJ0 330 aaKnown RBP18.42■□□□□ 0.54
CROCCP3-202ENST00000420820 CYBRD1Q53TN4 286 aa18.42■□□□□ 0.54
CROCCP3-202ENST00000420820 EEF1AKMT2Q5JPI9 291 aaKnown RBP18.42■□□□□ 0.54
CROCCP3-202ENST00000420820 ZNF648Q5T619 568 aaPredicted RBP18.42■□□□□ 0.54
CROCCP3-202ENST00000420820 LIPJQ5W064 366 aa18.42■□□□□ 0.54
CROCCP3-202ENST00000420820 TBPL2Q6SJ96 375 aa18.42■□□□□ 0.54
CROCCP3-202ENST00000420820 LIPIQ6XZB0 460 aa18.42■□□□□ 0.54
CROCCP3-202ENST00000420820 USP51Q70EK9 711 aa18.42■□□□□ 0.54
CROCCP3-202ENST00000420820 GRASPQ7Z6J2 395 aaPredicted RBP18.42■□□□□ 0.54
CROCCP3-202ENST00000420820 RASGEF1AQ8N9B8 481 aa18.42■□□□□ 0.54
CROCCP3-202ENST00000420820 GLMNQ92990 594 aa18.42■□□□□ 0.54
CROCCP3-202ENST00000420820 APIPQ96GX9 242 aa18.42■□□□□ 0.54
CROCCP3-202ENST00000420820 THUMPD3Q9BV44 507 aaKnown RBP18.42■□□□□ 0.54
CROCCP3-202ENST00000420820 TRIM4Q9C037 500 aa18.42■□□□□ 0.54
CROCCP3-202ENST00000420820 CAAP1Q9H8G2 361 aa18.42■□□□□ 0.54
CROCCP3-202ENST00000420820 PPT2Q9UMR5 302 aa18.42■□□□□ 0.54
CROCCP3-202ENST00000420820 DMTF1Q9Y222 760 aa18.42■□□□□ 0.54
CROCCP3-202ENST00000420820 PCDHB14Q9Y5E9 798 aa18.42■□□□□ 0.54
CROCCP3-202ENST00000420820 LRRK1Q38SD2 2015 aa18.42■□□□□ 0.54
CROCCP3-202ENST00000420820 SLC5A10A0PJK1 596 aa18.41■□□□□ 0.54
CROCCP3-202ENST00000420820 ELOVL7A1L3X0 281 aa18.41■□□□□ 0.54
CROCCP3-202ENST00000420820 PABPN1LA6NDY0 278 aaKnown RBP18.41■□□□□ 0.54
CROCCP3-202ENST00000420820 SCELO95171 688 aa18.41■□□□□ 0.54
CROCCP3-202ENST00000420820 CYP17A1P05093 508 aa18.41■□□□□ 0.54
CROCCP3-202ENST00000420820 POU2F2P09086 479 aa18.41■□□□□ 0.54
CROCCP3-202ENST00000420820 CD22P20273 847 aa18.41■□□□□ 0.54
CROCCP3-202ENST00000420820 MAPK1P28482 360 aa18.41■□□□□ 0.54
CROCCP3-202ENST00000420820 IRS1P35568 1242 aa18.41■□□□□ 0.54
CROCCP3-202ENST00000420820 PRLHRP49683 370 aa18.41■□□□□ 0.54
CROCCP3-202ENST00000420820 CHIT1Q13231 466 aa18.41■□□□□ 0.54
CROCCP3-202ENST00000420820 GTDC1Q4AE62 458 aa18.41■□□□□ 0.54
CROCCP3-202ENST00000420820 ZNF658BQ4V348 819 aaPredicted RBP18.41■□□□□ 0.54
CROCCP3-202ENST00000420820 TMEM240Q5SV17 173 aa18.41■□□□□ 0.54
CROCCP3-202ENST00000420820 MSANTD1Q6ZTZ1 278 aa18.41■□□□□ 0.54
CROCCP3-202ENST00000420820 NRSN1Q8IZ57 195 aa18.41■□□□□ 0.54
CROCCP3-202ENST00000420820 GLYATL1Q969I3 302 aa18.41■□□□□ 0.54
CROCCP3-202ENST00000420820 ZNF707Q96C28 371 aaPredicted RBP18.41■□□□□ 0.54
CROCCP3-202ENST00000420820 TMEM106CQ9BVX2 250 aa18.41■□□□□ 0.54
CROCCP3-202ENST00000420820 UGT2B28Q9BY64 529 aa18.41■□□□□ 0.54
CROCCP3-202ENST00000420820 ATG10Q9H0Y0 220 aa18.41■□□□□ 0.54
CROCCP3-202ENST00000420820 V9GYQ6 96 aa18.41■□□□□ 0.54
CROCCP3-202ENST00000420820 PDE4DIPQ5VU43 2346 aa18.41■□□□□ 0.54
CROCCP3-202ENST00000420820 OR2AG2A6NM03 316 aa18.41■□□□□ 0.54
CROCCP3-202ENST00000420820 FAM220BPB1ANY3 271 aa18.41■□□□□ 0.54
CROCCP3-202ENST00000420820 TSPAN6O43657 245 aa18.41■□□□□ 0.54
CROCCP3-202ENST00000420820 DEAF1O75398 565 aaPredicted RBP18.41■□□□□ 0.54
CROCCP3-202ENST00000420820 ETS2P15036 469 aa18.41■□□□□ 0.54
CROCCP3-202ENST00000420820 S100A3P33764 101 aa18.41■□□□□ 0.54
CROCCP3-202ENST00000420820 CAPGP40121 348 aa18.41■□□□□ 0.54
CROCCP3-202ENST00000420820 CTSCP53634 463 aa18.41■□□□□ 0.54
CROCCP3-202ENST00000420820 ADARB1P78563 741 aaKnown RBP18.41■□□□□ 0.54
CROCCP3-202ENST00000420820 NKG7Q16617 165 aa18.41■□□□□ 0.54
CROCCP3-202ENST00000420820 ZNF284Q2VY69 593 aa18.41■□□□□ 0.54
CROCCP3-202ENST00000420820 CYP2U1Q7Z449 544 aa18.41■□□□□ 0.54
CROCCP3-202ENST00000420820 RAVER1Q8IY67 606 aaKnown RBP18.41■□□□□ 0.54
CROCCP3-202ENST00000420820 MICU2Q8IYU8 434 aa18.41■□□□□ 0.54
CROCCP3-202ENST00000420820 ALDH16A1Q8IZ83 802 aa18.41■□□□□ 0.54
CROCCP3-202ENST00000420820 FAM86B1Q8N7N1 296 aa18.41■□□□□ 0.54
CROCCP3-202ENST00000420820 KIAA1958Q8N8K9 716 aa18.41■□□□□ 0.54
CROCCP3-202ENST00000420820 WDR20Q8TBZ3 569 aa18.41■□□□□ 0.54
CROCCP3-202ENST00000420820 WFIKKN2Q8TEU8 576 aa18.41■□□□□ 0.54
CROCCP3-202ENST00000420820 TUBA8Q9NY65 449 aaPredicted RBP18.41■□□□□ 0.54
CROCCP3-202ENST00000420820 SLC27A6Q9Y2P4 619 aa18.41■□□□□ 0.54
CROCCP3-202ENST00000420820 PSMD11O00231 422 aa18.4■□□□□ 0.54
CROCCP3-202ENST00000420820 HOXC11O43248 304 aaPredicted RBP18.4■□□□□ 0.54
CROCCP3-202ENST00000420820 GMNNO75496 209 aa18.4■□□□□ 0.54
CROCCP3-202ENST00000420820 BMP10O95393 424 aa18.4■□□□□ 0.54
CROCCP3-202ENST00000420820 RETP07949 1114 aa18.4■□□□□ 0.54
CROCCP3-202ENST00000420820 DGKGP49619 791 aa18.4■□□□□ 0.54
CROCCP3-202ENST00000420820 CHRNB3Q05901 458 aa18.4■□□□□ 0.54
CROCCP3-202ENST00000420820 CSTF3Q12996 717 aaKnown RBP18.4■□□□□ 0.54
CROCCP3-202ENST00000420820 MTAPQ13126 283 aa18.4■□□□□ 0.54
CROCCP3-202ENST00000420820 MAP7Q14244 749 aa18.4■□□□□ 0.54
CROCCP3-202ENST00000420820 NAIF1Q69YI7 327 aaPredicted RBP18.4■□□□□ 0.54
Retrieved 100 of 20,778 RNA–protein pairs in 29.9 ms