RNA–Protein interactions for RNA: ENST00000418518.2

LINCMD1-201, Transcript of long intergenic non-protein coding RNA, muscle differentiation 1, humanhuman

TSL 5 BASIC

Gene LINCMD1, Length 462 nt, Biotype lincRNA, Subcellular localisation Cytoplasm .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINCMD1-201ENST00000418518 BCKDHAP12694 445 aa8.79□□□□□ -1
LINCMD1-201ENST00000418518 ZNF8P17098 575 aaPredicted RBP8.79□□□□□ -1
LINCMD1-201ENST00000418518 HOXB9P17482 250 aaPredicted RBP8.79□□□□□ -1
LINCMD1-201ENST00000418518 ATP6V1B2P21281 511 aa8.79□□□□□ -1
LINCMD1-201ENST00000418518 ITPKAP23677 461 aa8.79□□□□□ -1
LINCMD1-201ENST00000418518 PEX2P28328 305 aa8.79□□□□□ -1
LINCMD1-201ENST00000418518 HTR1EP28566 365 aa8.79□□□□□ -1
LINCMD1-201ENST00000418518 PDHA2P29803 388 aa8.79□□□□□ -1
LINCMD1-201ENST00000418518 BMP8BP34820 402 aa8.79□□□□□ -1
LINCMD1-201ENST00000418518 MSX2P35548 267 aaPredicted RBP8.79□□□□□ -1
LINCMD1-201ENST00000418518 BDKRB1P46663 353 aa8.79□□□□□ -1
LINCMD1-201ENST00000418518 GSK3BP49841 420 aa8.79□□□□□ -1
LINCMD1-201ENST00000418518 ERFP50548 548 aa8.79□□□□□ -1
LINCMD1-201ENST00000418518 CLDN8P56748 225 aa8.79□□□□□ -1
LINCMD1-201ENST00000418518 CDK3Q00526 305 aa8.79□□□□□ -1
LINCMD1-201ENST00000418518 HMGCS1Q01581 520 aa8.79□□□□□ -1
LINCMD1-201ENST00000418518 ABRQ12979 859 aa8.79□□□□□ -1
LINCMD1-201ENST00000418518 CHIT1Q13231 466 aa8.79□□□□□ -1
LINCMD1-201ENST00000418518 NAE1Q13564 534 aa8.79□□□□□ -1
LINCMD1-201ENST00000418518 PWP1Q13610 501 aa8.79□□□□□ -1
LINCMD1-201ENST00000418518 CPSF6Q16630 551 aaKnown RBP eCLIP8.79□□□□□ -1
LINCMD1-201ENST00000418518 MAP7D1Q3KQU3 841 aa8.79□□□□□ -1
LINCMD1-201ENST00000418518 ZNF776Q68DI1 518 aaPredicted RBP8.79□□□□□ -1
LINCMD1-201ENST00000418518 PNCKQ6P2M8 343 aa8.79□□□□□ -1
LINCMD1-201ENST00000418518 LAYNQ6UX15 382 aa8.79□□□□□ -1
LINCMD1-201ENST00000418518 IZUMO2Q6UXV1 221 aa8.79□□□□□ -1
LINCMD1-201ENST00000418518 PDZD3Q86UT5 571 aa8.79□□□□□ -1
LINCMD1-201ENST00000418518 TRIM74Q86UV6 250 aa8.79□□□□□ -1
LINCMD1-201ENST00000418518 DHFR2Q86XF0 187 aa8.79□□□□□ -1
LINCMD1-201ENST00000418518 TRAPPC5Q8IUR0 188 aa8.79□□□□□ -1
LINCMD1-201ENST00000418518 LRRC56Q8IYG6 542 aaPredicted RBP8.79□□□□□ -1
LINCMD1-201ENST00000418518 LIX1Q8N485 282 aa8.79□□□□□ -1
LINCMD1-201ENST00000418518 ZNF513Q8N8E2 541 aaPredicted RBP8.79□□□□□ -1
LINCMD1-201ENST00000418518 FAM156AQ8NDB6 213 aa8.79□□□□□ -1
LINCMD1-201ENST00000418518 HIPK4Q8NE63 616 aa8.79□□□□□ -1
LINCMD1-201ENST00000418518 ADCY4Q8NFM4 1077 aa8.79□□□□□ -1
LINCMD1-201ENST00000418518 OR8J3Q8NGG0 315 aa8.79□□□□□ -1
LINCMD1-201ENST00000418518 CSGALNACT1Q8TDX6 532 aa8.79□□□□□ -1
LINCMD1-201ENST00000418518 SLC13A3Q8WWT9 602 aa8.79□□□□□ -1
LINCMD1-201ENST00000418518 SELENOMQ8WWX9 145 aa8.79□□□□□ -1
LINCMD1-201ENST00000418518 TESCQ96BS2 214 aa8.79□□□□□ -1
LINCMD1-201ENST00000418518 PYCR2Q96C36 320 aa8.79□□□□□ -1
LINCMD1-201ENST00000418518 PKP4Q99569 1192 aa8.79□□□□□ -1
LINCMD1-201ENST00000418518 TEX101Q9BY14 249 aa8.79□□□□□ -1
LINCMD1-201ENST00000418518 DPY30Q9C005 99 aa8.79□□□□□ -1
LINCMD1-201ENST00000418518 KLHL4Q9C0H6 718 aa8.79□□□□□ -1
LINCMD1-201ENST00000418518 PCDHAC1Q9H158 963 aa8.79□□□□□ -1
LINCMD1-201ENST00000418518 EHD1Q9H4M9 534 aa8.79□□□□□ -1
LINCMD1-201ENST00000418518 ELOVL6Q9H5J4 265 aa8.79□□□□□ -1
LINCMD1-201ENST00000418518 BRF2Q9HAW0 419 aa8.79□□□□□ -1
LINCMD1-201ENST00000418518 TRPV5Q9NQA5 729 aa8.79□□□□□ -1
LINCMD1-201ENST00000418518 INTS7Q9NVH2 962 aaKnown RBP8.79□□□□□ -1
LINCMD1-201ENST00000418518 ARMC1Q9NVT9 282 aa8.79□□□□□ -1
LINCMD1-201ENST00000418518 CNOT11Q9UKZ1 510 aaKnown RBP8.79□□□□□ -1
LINCMD1-201ENST00000418518 PPT2Q9UMR5 302 aa8.79□□□□□ -1
LINCMD1-201ENST00000418518 AP3M1Q9Y2T2 418 aa8.79□□□□□ -1
LINCMD1-201ENST00000418518 TSC22D4Q9Y3Q8 395 aa8.79□□□□□ -1
LINCMD1-201ENST00000418518 PLXND1Q9Y4D7 1925 aa8.79□□□□□ -1
LINCMD1-201ENST00000418518 KRT87PA6NCN2 255 aa8.78□□□□□ -1
LINCMD1-201ENST00000418518 PRR19A6NJB7 356 aa8.78□□□□□ -1
LINCMD1-201ENST00000418518 CLGNO14967 610 aa8.78□□□□□ -1
LINCMD1-201ENST00000418518 ARPC2O15144 300 aa8.78□□□□□ -1
LINCMD1-201ENST00000418518 RNASEH1O60930 286 aaKnown RBP8.78□□□□□ -1
LINCMD1-201ENST00000418518 SEC22BO75396 215 aa8.78□□□□□ -1
LINCMD1-201ENST00000418518 RNASEH2AO75792 299 aaKnown RBP8.78□□□□□ -1
LINCMD1-201ENST00000418518 POP7O75817 140 aaKnown RBP8.78□□□□□ -1
LINCMD1-201ENST00000418518 STAMBPO95630 424 aa8.78□□□□□ -1
LINCMD1-201ENST00000418518 SLC16A8O95907 504 aa8.78□□□□□ -1
LINCMD1-201ENST00000418518 PIM1P11309 404 aaPredicted RBP8.78□□□□□ -1
LINCMD1-201ENST00000418518 AMD1P17707 334 aa8.78□□□□□ -1
LINCMD1-201ENST00000418518 SDC1P18827 310 aa8.78□□□□□ -1
LINCMD1-201ENST00000418518 TCN1P20061 433 aaPredicted RBP8.78□□□□□ -1
LINCMD1-201ENST00000418518 PBLDP30039 288 aaPredicted RBP8.78□□□□□ -1
LINCMD1-201ENST00000418518 TRIM23P36406 574 aa8.78□□□□□ -1
LINCMD1-201ENST00000418518 LTBRP36941 435 aa8.78□□□□□ -1
LINCMD1-201ENST00000418518 GALK1P51570 392 aa8.78□□□□□ -1
LINCMD1-201ENST00000418518 RPS14P62263 151 aaKnown RBP8.78□□□□□ -1
LINCMD1-201ENST00000418518 YBX1P67809 324 aaKnown RBP8.78□□□□□ -1
LINCMD1-201ENST00000418518 IRF8Q02556 426 aa8.78□□□□□ -1
LINCMD1-201ENST00000418518 DLX2Q07687 328 aaPredicted RBP8.78□□□□□ -1
LINCMD1-201ENST00000418518 DMPKQ09013 629 aa8.78□□□□□ -1
LINCMD1-201ENST00000418518 MTAPQ13126 283 aa8.78□□□□□ -1
LINCMD1-201ENST00000418518 BLMHQ13867 455 aa8.78□□□□□ -1
LINCMD1-201ENST00000418518 DOC2AQ14183 400 aa8.78□□□□□ -1
LINCMD1-201ENST00000418518 CAPRIN1Q14444 709 aaKnown RBP8.78□□□□□ -1
LINCMD1-201ENST00000418518 PTGR1Q14914 329 aa8.78□□□□□ -1
LINCMD1-201ENST00000418518 TRIP10Q15642 601 aa8.78□□□□□ -1
LINCMD1-201ENST00000418518 DPY19L1Q2PZI1 675 aa8.78□□□□□ -1
LINCMD1-201ENST00000418518 WSCD2Q2TBF2 565 aa8.78□□□□□ -1
LINCMD1-201ENST00000418518 CCSMST1Q4G0I0 132 aa8.78□□□□□ -1
LINCMD1-201ENST00000418518 TMEM259Q4ZIN3 620 aa8.78□□□□□ -1
LINCMD1-201ENST00000418518 SFT2D3Q587I9 215 aa8.78□□□□□ -1
LINCMD1-201ENST00000418518 LRIF1Q5T3J3 769 aa8.78□□□□□ -1
LINCMD1-201ENST00000418518 KIAA1161Q6NSJ0 714 aa8.78□□□□□ -1
LINCMD1-201ENST00000418518 NANOGP8Q6NSW7 305 aa8.78□□□□□ -1
LINCMD1-201ENST00000418518 SLC2A7Q6PXP3 512 aa8.78□□□□□ -1
LINCMD1-201ENST00000418518 SLCO4C1Q6ZQN7 724 aa8.78□□□□□ -1
LINCMD1-201ENST00000418518 SPATA24Q86W54 205 aa8.78□□□□□ -1
LINCMD1-201ENST00000418518 HEATR4Q86WZ0 1026 aa8.78□□□□□ -1
LINCMD1-201ENST00000418518 RIMKLAQ8IXN7 391 aa8.78□□□□□ -1
Retrieved 100 of 20,778 RNA–protein pairs in 83.5 ms