RNA–Protein interactions for RNA: ENST00000417814.3

TNFRSF8-203, Transcript of TNF receptor superfamily member 8, humanhuman

TSL 1 (best) BASIC

Gene TNFRSF8, Length 3,593 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFRSF8-203ENST00000417814 SLC24A5Q71RS6 500 aa12.88□□□□□ -0.35
TNFRSF8-203ENST00000417814 SERINC5Q86VE9 423 aa12.88□□□□□ -0.35
TNFRSF8-203ENST00000417814 ZFAND4Q86XD8 727 aa12.88□□□□□ -0.35
TNFRSF8-203ENST00000417814 CMTM8Q8IZV2 173 aa12.88□□□□□ -0.35
TNFRSF8-203ENST00000417814 FBXO22Q8NEZ5 403 aa12.88□□□□□ -0.35
TNFRSF8-203ENST00000417814 MCFD2Q8NI22 146 aa12.88□□□□□ -0.35
TNFRSF8-203ENST00000417814 TMEM203Q969S6 136 aa12.88□□□□□ -0.35
TNFRSF8-203ENST00000417814 COPS8Q99627 209 aa12.88□□□□□ -0.35
TNFRSF8-203ENST00000417814 STARD7Q9NQZ5 370 aa12.88□□□□□ -0.35
TNFRSF8-203ENST00000417814 TMED5Q9Y3A6 229 aa12.88□□□□□ -0.35
TNFRSF8-203ENST00000417814 CFAP20Q9Y6A4 193 aaKnown RBP12.88□□□□□ -0.35
TNFRSF8-203ENST00000417814 NME6O75414 186 aaPredicted RBP12.88□□□□□ -0.35
TNFRSF8-203ENST00000417814 SERPINB1P30740 379 aa12.88□□□□□ -0.35
TNFRSF8-203ENST00000417814 NR4A2P43354 598 aa12.88□□□□□ -0.35
TNFRSF8-203ENST00000417814 PRIM2P49643 509 aa12.88□□□□□ -0.35
TNFRSF8-203ENST00000417814 RNF144AP50876 292 aaPredicted RBP12.88□□□□□ -0.35
TNFRSF8-203ENST00000417814 BCAP31P51572 246 aa12.88□□□□□ -0.35
TNFRSF8-203ENST00000417814 TAF1AQ15573 450 aaPredicted RBP12.88□□□□□ -0.35
TNFRSF8-203ENST00000417814 OLIG3Q7RTU3 272 aa12.88□□□□□ -0.35
TNFRSF8-203ENST00000417814 NLE1Q9NVX2 485 aaPredicted RBP12.88□□□□□ -0.35
TNFRSF8-203ENST00000417814 SLCO3A1Q9UIG8 710 aa12.88□□□□□ -0.35
TNFRSF8-203ENST00000417814 MOSPD1Q9UJG1 213 aa12.88□□□□□ -0.35
TNFRSF8-203ENST00000417814 FAM227AF5H4B4 570 aa12.87□□□□□ -0.35
TNFRSF8-203ENST00000417814 FPGTO14772 594 aa12.87□□□□□ -0.35
TNFRSF8-203ENST00000417814 SOX14O95416 240 aa12.87□□□□□ -0.35
TNFRSF8-203ENST00000417814 DCTP40126 519 aa12.87□□□□□ -0.35
TNFRSF8-203ENST00000417814 HLCSP50747 726 aa12.87□□□□□ -0.35
TNFRSF8-203ENST00000417814 RPS14P62263 151 aaKnown RBP12.87□□□□□ -0.35
TNFRSF8-203ENST00000417814 RPS26P62854 115 aaKnown RBP12.87□□□□□ -0.35
TNFRSF8-203ENST00000417814 EMX1Q04741 257 aaPredicted RBP12.87□□□□□ -0.35
TNFRSF8-203ENST00000417814 EMX2Q04743 252 aa12.87□□□□□ -0.35
TNFRSF8-203ENST00000417814 SMARCB1Q12824 385 aa12.87□□□□□ -0.35
TNFRSF8-203ENST00000417814 CARD16Q5EG05 197 aa12.87□□□□□ -0.35
TNFRSF8-203ENST00000417814 DLEU7Q6UYE1 221 aa12.87□□□□□ -0.35
TNFRSF8-203ENST00000417814 CHDHQ8NE62 594 aaPredicted RBP12.87□□□□□ -0.35
TNFRSF8-203ENST00000417814 EID2BQ96D98 161 aa12.87□□□□□ -0.35
TNFRSF8-203ENST00000417814 ZBTB20Q9HC78 741 aaPredicted RBP12.87□□□□□ -0.35
TNFRSF8-203ENST00000417814 TMEM161AQ9NX61 479 aa12.87□□□□□ -0.35
TNFRSF8-203ENST00000417814 IMPAD1Q9NX62 359 aa12.87□□□□□ -0.35
TNFRSF8-203ENST00000417814 SLC25A37Q9NYZ2 338 aa12.87□□□□□ -0.35
TNFRSF8-203ENST00000417814 GPC6Q9Y625 555 aaPredicted RBP12.87□□□□□ -0.35
TNFRSF8-203ENST00000417814 GLYATL1P3A0A0U1RQE8 302 aa12.87□□□□□ -0.35
TNFRSF8-203ENST00000417814 DYTNA2CJ06 578 aa12.87□□□□□ -0.35
TNFRSF8-203ENST00000417814 SLC1A7O00341 560 aa12.87□□□□□ -0.35
TNFRSF8-203ENST00000417814 KRT6AP02538 564 aa12.87□□□□□ -0.35
TNFRSF8-203ENST00000417814 KRT6BP04259 564 aa12.87□□□□□ -0.35
TNFRSF8-203ENST00000417814 ALPLP05186 524 aa12.87□□□□□ -0.35
TNFRSF8-203ENST00000417814 KRT6CP48668 564 aa12.87□□□□□ -0.35
TNFRSF8-203ENST00000417814 CDH12P55289 794 aa12.87□□□□□ -0.35
TNFRSF8-203ENST00000417814 INTS11Q5TA45 600 aaKnown RBP12.87□□□□□ -0.35
TNFRSF8-203ENST00000417814 MYO19Q96H55 970 aa12.87□□□□□ -0.35
TNFRSF8-203ENST00000417814 SLC39A13Q96H72 371 aa12.87□□□□□ -0.35
TNFRSF8-203ENST00000417814 ASB2Q96Q27 587 aa12.87□□□□□ -0.35
TNFRSF8-203ENST00000417814 ACTL8Q9H568 366 aa12.87□□□□□ -0.35
TNFRSF8-203ENST00000417814 AASDHPPTQ9NRN7 309 aa12.87□□□□□ -0.35
TNFRSF8-203ENST00000417814 GIN1Q9NXP7 522 aa12.87□□□□□ -0.35
TNFRSF8-203ENST00000417814 RAB23Q9ULC3 237 aa12.87□□□□□ -0.35
TNFRSF8-203ENST00000417814 PCDHB8Q9UN66 801 aa12.87□□□□□ -0.35
TNFRSF8-203ENST00000417814 TMEM98Q9Y2Y6 226 aa12.87□□□□□ -0.35
TNFRSF8-203ENST00000417814 DOCK1Q14185 1865 aa12.87□□□□□ -0.35
TNFRSF8-203ENST00000417814 ARID1AO14497 2285 aa12.87□□□□□ -0.35
TNFRSF8-203ENST00000417814 SZT2Q5T011 3432 aa12.87□□□□□ -0.35
TNFRSF8-203ENST00000417814 KRBA1A5PL33 1030 aa12.87□□□□□ -0.35
TNFRSF8-203ENST00000417814 CLDN25C9JDP6 229 aa12.87□□□□□ -0.35
TNFRSF8-203ENST00000417814 ABCB7O75027 752 aa12.87□□□□□ -0.35
TNFRSF8-203ENST00000417814 ADAM23O75077 832 aa12.87□□□□□ -0.35
TNFRSF8-203ENST00000417814 EEDO75530 441 aaKnown RBP12.87□□□□□ -0.35
TNFRSF8-203ENST00000417814 MYO1DO94832 1006 aa12.87□□□□□ -0.35
TNFRSF8-203ENST00000417814 ENO2P09104 434 aaPredicted RBP12.87□□□□□ -0.35
TNFRSF8-203ENST00000417814 CKBP12277 381 aa12.87□□□□□ -0.35
TNFRSF8-203ENST00000417814 CRHBPP24387 322 aa12.87□□□□□ -0.35
TNFRSF8-203ENST00000417814 TUBA4AP68366 448 aa12.87□□□□□ -0.35
TNFRSF8-203ENST00000417814 MVKQ03426 396 aa12.87□□□□□ -0.35
TNFRSF8-203ENST00000417814 USP39Q53GS9 565 aaKnown RBP12.87□□□□□ -0.35
TNFRSF8-203ENST00000417814 ADCK2Q7Z695 626 aa12.87□□□□□ -0.35
TNFRSF8-203ENST00000417814 ADAMTSL2Q86TH1 951 aa12.87□□□□□ -0.35
TNFRSF8-203ENST00000417814 TAGAPQ8N103 731 aa12.87□□□□□ -0.35
TNFRSF8-203ENST00000417814 STX19Q8N4C7 294 aa12.87□□□□□ -0.35
TNFRSF8-203ENST00000417814 VANGL1Q8TAA9 524 aaPredicted RBP12.87□□□□□ -0.35
TNFRSF8-203ENST00000417814 DOK4Q8TEW6 326 aa12.87□□□□□ -0.35
TNFRSF8-203ENST00000417814 NRTNQ99748 197 aa12.87□□□□□ -0.35
TNFRSF8-203ENST00000417814 C5AR2Q9P296 337 aa12.87□□□□□ -0.35
TNFRSF8-203ENST00000417814 CPQQ9Y646 472 aa12.87□□□□□ -0.35
TNFRSF8-203ENST00000417814 HAS3O00219 553 aa12.86□□□□□ -0.35
TNFRSF8-203ENST00000417814 RPS17P08708 135 aaKnown RBP12.86□□□□□ -0.35
TNFRSF8-203ENST00000417814 MSH3P20585 1137 aa12.86□□□□□ -0.35
TNFRSF8-203ENST00000417814 HNF1BP35680 557 aa12.86□□□□□ -0.35
TNFRSF8-203ENST00000417814 ST13P50502 369 aaKnown RBP12.86□□□□□ -0.35
TNFRSF8-203ENST00000417814 PROSER1Q86XN7 944 aa12.86□□□□□ -0.35
TNFRSF8-203ENST00000417814 GTF2H4Q92759 462 aa12.86□□□□□ -0.35
TNFRSF8-203ENST00000417814 PPP3R2Q96LZ3 170 aa12.86□□□□□ -0.35
TNFRSF8-203ENST00000417814 SLX1AQ9BQ83 275 aa12.86□□□□□ -0.35
TNFRSF8-203ENST00000417814 REEP1Q9H902 201 aa12.86□□□□□ -0.35
TNFRSF8-203ENST00000417814 MALT1Q9UDY8 824 aa12.86□□□□□ -0.35
TNFRSF8-203ENST00000417814 MGAT4DA6NG13 374 aa12.86□□□□□ -0.35
TNFRSF8-203ENST00000417814 FGF4P08620 206 aa12.86□□□□□ -0.35
TNFRSF8-203ENST00000417814 ANXA5P08758 320 aa12.86□□□□□ -0.35
TNFRSF8-203ENST00000417814 ALPPL2P10696 532 aa12.86□□□□□ -0.35
TNFRSF8-203ENST00000417814 ATF6P18850 670 aa12.86□□□□□ -0.35
TNFRSF8-203ENST00000417814 PRKAG1P54619 331 aa12.86□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 23.1 ms