RNA–Protein interactions for RNA: ENST00000417040.1

UBR4-205, Transcript of ubiquitin protein ligase E3 component n-recognin 4, humanhuman

TSL 5

Gene UBR4, Length 6,175 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBR4-205ENST00000417040 TRPS1Q9UHF7 1281 aa11.8□□□□□ -0.52
UBR4-205ENST00000417040 HSPB11Q9Y547 144 aa11.8□□□□□ -0.52
UBR4-205ENST00000417040 MYBPHLA2RUH7 354 aa11.8□□□□□ -0.52
UBR4-205ENST00000417040 GBAP04062 536 aa11.8□□□□□ -0.52
UBR4-205ENST00000417040 RHOQP17081 205 aa11.8□□□□□ -0.52
UBR4-205ENST00000417040 CYP3A5P20815 502 aa11.8□□□□□ -0.52
UBR4-205ENST00000417040 RPS3P23396 243 aaKnown RBP eCLIP11.8□□□□□ -0.526e-8■■□□□ 13.9
UBR4-205ENST00000417040 GLUD2P49448 558 aa11.8□□□□□ -0.52
UBR4-205ENST00000417040 RNF144AP50876 292 aaPredicted RBP11.8□□□□□ -0.52
UBR4-205ENST00000417040 ERVK-8P63133 956 aa11.8□□□□□ -0.52
UBR4-205ENST00000417040 TUBA4AP68366 448 aa11.8□□□□□ -0.52
UBR4-205ENST00000417040 MOGQ16653 247 aa11.8□□□□□ -0.52
UBR4-205ENST00000417040 KLHL26Q53HC5 615 aa11.8□□□□□ -0.52
UBR4-205ENST00000417040 CRB2Q5IJ48 1285 aa11.8□□□□□ -0.52
UBR4-205ENST00000417040 CES5AQ6NT32 575 aa11.8□□□□□ -0.52
UBR4-205ENST00000417040 PTF1AQ7RTS3 328 aa11.8□□□□□ -0.52
UBR4-205ENST00000417040 MSANTD3Q96H12 275 aa11.8□□□□□ -0.52
UBR4-205ENST00000417040 MCCC1Q96RQ3 725 aaPredicted RBP11.8□□□□□ -0.52
UBR4-205ENST00000417040 KXD1Q9BQD3 176 aa11.8□□□□□ -0.52
UBR4-205ENST00000417040 RDH8Q9NYR8 311 aa11.8□□□□□ -0.52
UBR4-205ENST00000417040 YJEFN3A6XGL0 299 aa11.79□□□□□ -0.52
UBR4-205ENST00000417040 OR7A10O76100 309 aa11.79□□□□□ -0.52
UBR4-205ENST00000417040 GSK3BP49841 420 aa11.79□□□□□ -0.52
UBR4-205ENST00000417040 KCNJ11Q14654 390 aa11.79□□□□□ -0.52
UBR4-205ENST00000417040 TMEM220Q6QAJ8 160 aa11.79□□□□□ -0.52
UBR4-205ENST00000417040 ZNF558Q96NG5 402 aa11.79□□□□□ -0.52
UBR4-205ENST00000417040 ZNF347Q96SE7 839 aa11.79□□□□□ -0.52
UBR4-205ENST00000417040 TMEM209Q96SK2 561 aa11.79□□□□□ -0.52
UBR4-205ENST00000417040 CCDC177Q9NQR7 707 aaPredicted RBP11.79□□□□□ -0.52
UBR4-205ENST00000417040 ZNF639Q9UID6 485 aa11.79□□□□□ -0.52
UBR4-205ENST00000417040 RPL36Q9Y3U8 105 aaKnown RBP11.79□□□□□ -0.52
UBR4-205ENST00000417040 C12orf71A8MTZ7 269 aa11.79□□□□□ -0.52
UBR4-205ENST00000417040 GRM6O15303 877 aa11.79□□□□□ -0.52
UBR4-205ENST00000417040 CHP2O43745 196 aa11.79□□□□□ -0.52
UBR4-205ENST00000417040 ALPIP09923 528 aa11.79□□□□□ -0.52
UBR4-205ENST00000417040 GLDCP23378 1020 aa11.79□□□□□ -0.52
UBR4-205ENST00000417040 GRK5P34947 590 aa11.79□□□□□ -0.52
UBR4-205ENST00000417040 ADAM8P78325 824 aa11.79□□□□□ -0.52
UBR4-205ENST00000417040 PSRC1Q6PGN9 363 aaPredicted RBP11.79□□□□□ -0.52
UBR4-205ENST00000417040 ARL9Q6T311 187 aa11.79□□□□□ -0.52
UBR4-205ENST00000417040 POP5Q969H6 163 aaKnown RBP11.79□□□□□ -0.52
UBR4-205ENST00000417040 PRR11Q96HE9 360 aaPredicted RBP11.79□□□□□ -0.52
UBR4-205ENST00000417040 LGR4Q9BXB1 951 aa11.79□□□□□ -0.52
UBR4-205ENST00000417040 TRPV4Q9HBA0 871 aa11.79□□□□□ -0.52
UBR4-205ENST00000417040 J3QLW9 94 aa11.79□□□□□ -0.52
UBR4-205ENST00000417040 TREHO43280 583 aa11.79□□□□□ -0.52
UBR4-205ENST00000417040 HTRA2O43464 458 aaPredicted RBP11.79□□□□□ -0.52
UBR4-205ENST00000417040 CLDN11O75508 207 aa11.79□□□□□ -0.52
UBR4-205ENST00000417040 BCHEP06276 602 aa11.79□□□□□ -0.52
UBR4-205ENST00000417040 MMP3P08254 477 aa11.79□□□□□ -0.52
UBR4-205ENST00000417040 ZNF19P17023 458 aa11.79□□□□□ -0.52
UBR4-205ENST00000417040 PGDP52209 483 aa11.79□□□□□ -0.52
UBR4-205ENST00000417040 S100A10P60903 97 aa11.79□□□□□ -0.52
UBR4-205ENST00000417040 PPP3R1P63098 170 aa11.79□□□□□ -0.52
UBR4-205ENST00000417040 IKBKEQ14164 716 aa11.79□□□□□ -0.52
UBR4-205ENST00000417040 CHST9Q7L1S5 443 aa11.79□□□□□ -0.52
UBR4-205ENST00000417040 AQP11Q8NBQ7 271 aa11.79□□□□□ -0.52
UBR4-205ENST00000417040 SMG8Q8ND04 991 aaKnown RBP11.79□□□□□ -0.52
UBR4-205ENST00000417040 ZNF548Q8NEK5 533 aaPredicted RBP11.79□□□□□ -0.52
UBR4-205ENST00000417040 DPF3Q92784 378 aa11.79□□□□□ -0.52
UBR4-205ENST00000417040 ITFG2Q969R8 447 aa11.79□□□□□ -0.52
UBR4-205ENST00000417040 CD320Q9NPF0 282 aa11.79□□□□□ -0.52
UBR4-205ENST00000417040 FARSAQ9Y285 508 aaKnown RBP11.79□□□□□ -0.52
UBR4-205ENST00000417040 SLC27A6Q9Y2P4 619 aa11.79□□□□□ -0.52
UBR4-205ENST00000417040 MRPS23Q9Y3D9 190 aaKnown RBP11.79□□□□□ -0.52
UBR4-205ENST00000417040 C13orf42A0A1B0GVH6 325 aa11.79□□□□□ -0.52
UBR4-205ENST00000417040 AQP12BA6NM10 295 aa11.79□□□□□ -0.52
UBR4-205ENST00000417040 HCRTO43612 131 aa11.79□□□□□ -0.52
UBR4-205ENST00000417040 RPLP2P05387 115 aaKnown RBP11.79□□□□□ -0.52
UBR4-205ENST00000417040 HADHBP55084 474 aaKnown RBP11.79□□□□□ -0.52
UBR4-205ENST00000417040 DRICH1Q6PGQ1 229 aaPredicted RBP11.79□□□□□ -0.52
UBR4-205ENST00000417040 AQP12AQ8IXF9 295 aa11.79□□□□□ -0.52
UBR4-205ENST00000417040 NAXEQ8NCW5 288 aa11.79□□□□□ -0.52
UBR4-205ENST00000417040 OR8D1Q8WZ84 308 aa11.79□□□□□ -0.52
UBR4-205ENST00000417040 PLEKHA1Q9HB21 404 aa11.79□□□□□ -0.52
UBR4-205ENST00000417040 FAM53CQ9NYF3 392 aa11.79□□□□□ -0.52
UBR4-205ENST00000417040 GTF2IRD1Q9UHL9 959 aa11.79□□□□□ -0.52
UBR4-205ENST00000417040 RNF6Q9Y252 685 aa11.79□□□□□ -0.52
UBR4-205ENST00000417040 VIRMAQ69YN4 1812 aaKnown RBP11.79□□□□□ -0.52
UBR4-205ENST00000417040 FAM159BA6NKW6 160 aa11.79□□□□□ -0.52
UBR4-205ENST00000417040 APOC1P02654 83 aa11.79□□□□□ -0.52
UBR4-205ENST00000417040 IGFALSP35858 605 aa11.79□□□□□ -0.52
UBR4-205ENST00000417040 GDF5P43026 501 aa11.79□□□□□ -0.52
UBR4-205ENST00000417040 COL9A2Q14055 689 aaPredicted RBP11.79□□□□□ -0.52
UBR4-205ENST00000417040 INTS6LQ5JSJ4 861 aaKnown RBP11.79□□□□□ -0.52
UBR4-205ENST00000417040 PLD6Q8N2A8 252 aaKnown RBP11.79□□□□□ -0.52
UBR4-205ENST00000417040 OR8S1Q8NH09 359 aa11.79□□□□□ -0.52
UBR4-205ENST00000417040 CCDC106Q9BWC9 280 aa11.79□□□□□ -0.52
UBR4-205ENST00000417040 MND1Q9BWT6 205 aa11.79□□□□□ -0.52
UBR4-205ENST00000417040 DNAJC27Q9NZQ0 273 aa11.79□□□□□ -0.52
UBR4-205ENST00000417040 GALPQ9UBC7 116 aa11.79□□□□□ -0.52
UBR4-205ENST00000417040 MAFFQ9ULX9 164 aa11.79□□□□□ -0.52
UBR4-205ENST00000417040 BCL9O00512 1426 aa11.78□□□□□ -0.52
UBR4-205ENST00000417040 MYPNQ86TC9 1320 aa11.78□□□□□ -0.52
UBR4-205ENST00000417040 CLIC1O00299 241 aa11.78□□□□□ -0.52
UBR4-205ENST00000417040 MTX2O75431 263 aa11.78□□□□□ -0.52
UBR4-205ENST00000417040 SNAP29O95721 258 aa11.78□□□□□ -0.52
UBR4-205ENST00000417040 HK1P19367 917 aa11.78□□□□□ -0.52
UBR4-205ENST00000417040 BTN3A2P78410 334 aa11.78□□□□□ -0.52
UBR4-205ENST00000417040 OGDHQ02218 1023 aa11.78□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 34.9 ms