RNA–Protein interactions for RNA: ENST00000409987.5

LSM5-206, Transcript of LSM5 homolog, U6 small nuclear RNA and mRNA degradation associated, humanhuman

TSL 5 BASIC

Gene LSM5, Length 504 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM5-206ENST00000409987 MFSD7Q6UXD7 560 aa4.89□□□□□ -1.63
LSM5-206ENST00000409987 ISLR2Q6UXK2 745 aa4.89□□□□□ -1.63
LSM5-206ENST00000409987 ZBTB49Q6ZSB9 765 aa4.89□□□□□ -1.63
LSM5-206ENST00000409987 ASB18Q6ZVZ8 466 aa4.89□□□□□ -1.63
LSM5-206ENST00000409987 ARHGAP30Q7Z6I6 1101 aaPredicted RBP4.89□□□□□ -1.63
LSM5-206ENST00000409987 TMEM173Q86WV6 379 aaPredicted RBP4.89□□□□□ -1.63
LSM5-206ENST00000409987 C4orf19Q8IY42 314 aa4.89□□□□□ -1.63
LSM5-206ENST00000409987 OR2AJ1Q8NGZ0 328 aa4.89□□□□□ -1.63
LSM5-206ENST00000409987 PPP4R1Q8TF05 950 aa4.89□□□□□ -1.63
LSM5-206ENST00000409987 FAM81BQ96LP2 452 aa4.89□□□□□ -1.63
LSM5-206ENST00000409987 ZNF385AQ96PM9 386 aaKnown RBP4.89□□□□□ -1.63
LSM5-206ENST00000409987 CTAGE1Q96RT6 745 aa4.89□□□□□ -1.63
LSM5-206ENST00000409987 TXN2Q99757 166 aa4.89□□□□□ -1.63
LSM5-206ENST00000409987 MOV10L1Q9BXT6 1211 aaKnown RBP4.89□□□□□ -1.63
LSM5-206ENST00000409987 LRMDAQ9H2I8 198 aa4.89□□□□□ -1.63
LSM5-206ENST00000409987 AKIRIN1Q9H9L7 192 aaPredicted RBP4.89□□□□□ -1.63
LSM5-206ENST00000409987 DNAJC11Q9NVH1 559 aa4.89□□□□□ -1.63
LSM5-206ENST00000409987 AATFQ9NY61 560 aaKnown RBP eCLIP4.89□□□□□ -1.63
LSM5-206ENST00000409987 LAMP5Q9UJQ1 280 aa4.89□□□□□ -1.63
LSM5-206ENST00000409987 FBXL5Q9UKA1 691 aa4.89□□□□□ -1.63
LSM5-206ENST00000409987 ZCCHC6Q5VYS8 1495 aaKnown RBP4.88□□□□□ -1.63
LSM5-206ENST00000409987 A0A0G2JPF8 293 aa4.88□□□□□ -1.63
LSM5-206ENST00000409987 PRSS51A0A1B0GVH4 220 aa4.88□□□□□ -1.63
LSM5-206ENST00000409987 SDR42E2A6NKP2 422 aa4.88□□□□□ -1.63
LSM5-206ENST00000409987 HNRNPCL3B7ZW38 293 aa4.88□□□□□ -1.63
LSM5-206ENST00000409987 TRIM77I1YAP6 450 aa4.88□□□□□ -1.63
LSM5-206ENST00000409987 OVOL3O00110 214 aa4.88□□□□□ -1.63
LSM5-206ENST00000409987 MED24O75448 989 aa4.88□□□□□ -1.63
LSM5-206ENST00000409987 OPN1MWP04001 364 aa4.88□□□□□ -1.63
LSM5-206ENST00000409987 ALPLP05186 524 aa4.88□□□□□ -1.63
LSM5-206ENST00000409987 ABHD2P08910 425 aa4.88□□□□□ -1.63
LSM5-206ENST00000409987 HNRNPCL4P0DMR1 293 aa4.88□□□□□ -1.63
LSM5-206ENST00000409987 OPN1MW2P0DN77 364 aa4.88□□□□□ -1.63
LSM5-206ENST00000409987 OPN1MW3P0DN78 364 aa4.88□□□□□ -1.63
LSM5-206ENST00000409987 CCDC192P0DO97 292 aa4.88□□□□□ -1.63
LSM5-206ENST00000409987 VCLP18206 1134 aa4.88□□□□□ -1.63
LSM5-206ENST00000409987 AHCYP23526 432 aa4.88□□□□□ -1.63
LSM5-206ENST00000409987 TIA1P31483 386 aaKnown RBP eCLIP4.88□□□□□ -1.63
LSM5-206ENST00000409987 FRKP42685 505 aaPredicted RBP4.88□□□□□ -1.63
LSM5-206ENST00000409987 PSMC4P43686 418 aa4.88□□□□□ -1.63
LSM5-206ENST00000409987 HNMTP50135 292 aa4.88□□□□□ -1.63
LSM5-206ENST00000409987 ZNF75DP51815 510 aa4.88□□□□□ -1.63
LSM5-206ENST00000409987 GFPT1Q06210 699 aaPredicted RBP4.88□□□□□ -1.63
LSM5-206ENST00000409987 GAMTQ14353 236 aa4.88□□□□□ -1.63
LSM5-206ENST00000409987 SF3B4Q15427 424 aaKnown RBP eCLIP4.88□□□□□ -1.631e-6■□□□□ 10.3
LSM5-206ENST00000409987 CEP55Q53EZ4 464 aa4.88□□□□□ -1.63
LSM5-206ENST00000409987 TMEM35AQ53FP2 167 aa4.88□□□□□ -1.63
LSM5-206ENST00000409987 KLHL26Q53HC5 615 aa4.88□□□□□ -1.63
LSM5-206ENST00000409987 RNASEH2BQ5TBB1 312 aaKnown RBP4.88□□□□□ -1.63
LSM5-206ENST00000409987 ZNF704Q6ZNC4 412 aaPredicted RBP4.88□□□□□ -1.63
LSM5-206ENST00000409987 TMEM182Q6ZP80 229 aaPredicted RBP4.88□□□□□ -1.63
LSM5-206ENST00000409987 RBM43Q6ZSC3 357 aaKnown RBP4.88□□□□□ -1.63
LSM5-206ENST00000409987 SIAH3Q8IW03 269 aa4.88□□□□□ -1.63
LSM5-206ENST00000409987 KDM8Q8N371 416 aa4.88□□□□□ -1.63
LSM5-206ENST00000409987 ZNF441Q8N8Z8 693 aa4.88□□□□□ -1.63
LSM5-206ENST00000409987 KIAA1524Q8TCG1 905 aa4.88□□□□□ -1.63
LSM5-206ENST00000409987 HEXDCQ8WVB3 486 aa4.88□□□□□ -1.63
LSM5-206ENST00000409987 SHC3Q92529 594 aa4.88□□□□□ -1.63
LSM5-206ENST00000409987 FIG4Q92562 907 aa4.88□□□□□ -1.63
LSM5-206ENST00000409987 ST6GALNAC6Q969X2 333 aa4.88□□□□□ -1.63
LSM5-206ENST00000409987 PHF21AQ96BD5 680 aa4.88□□□□□ -1.63
LSM5-206ENST00000409987 ADGRG7Q96K78 797 aa4.88□□□□□ -1.63
LSM5-206ENST00000409987 FAM84BQ96KN1 310 aaPredicted RBP4.88□□□□□ -1.63
LSM5-206ENST00000409987 OSBPL8Q9BZF1 889 aa4.88□□□□□ -1.63
LSM5-206ENST00000409987 DPAGT1Q9H3H5 408 aa4.88□□□□□ -1.63
LSM5-206ENST00000409987 TBC1D17Q9HA65 648 aa4.88□□□□□ -1.63
LSM5-206ENST00000409987 SYTL2Q9HCH5 934 aa4.88□□□□□ -1.63
LSM5-206ENST00000409987 HHATLQ9HCP6 504 aa4.88□□□□□ -1.63
LSM5-206ENST00000409987 SLC35D1Q9NTN3 355 aa4.88□□□□□ -1.63
LSM5-206ENST00000409987 TCP11L1Q9NUJ3 509 aa4.88□□□□□ -1.63
LSM5-206ENST00000409987 SPG21Q9NZD8 308 aa4.88□□□□□ -1.63
LSM5-206ENST00000409987 NPAP1Q9NZP6 1156 aa4.88□□□□□ -1.63
LSM5-206ENST00000409987 POLLQ9UGP5 575 aa4.88□□□□□ -1.63
LSM5-206ENST00000409987 HPCAL4Q9UM19 191 aa4.88□□□□□ -1.63
LSM5-206ENST00000409987 ANGPTL3Q9Y5C1 460 aa4.88□□□□□ -1.63
LSM5-206ENST00000409987 TAF1P21675 1872 aa4.88□□□□□ -1.63
LSM5-206ENST00000409987 ZCWPW2A0A1B0GU75 182 aa4.87□□□□□ -1.63
LSM5-206ENST00000409987 CLRN2A0PK11 232 aa4.87□□□□□ -1.63
LSM5-206ENST00000409987 ANKUB1A6NFN9 424 aa4.87□□□□□ -1.63
LSM5-206ENST00000409987 C5orf60A6NFR6 353 aa4.87□□□□□ -1.63
LSM5-206ENST00000409987 C4orf47A7E2U8 309 aa4.87□□□□□ -1.63
LSM5-206ENST00000409987 RASGRF2O14827 1237 aa4.87□□□□□ -1.63
LSM5-206ENST00000409987 ZNHIT1O43257 154 aa4.87□□□□□ -1.63
LSM5-206ENST00000409987 XRCC3O43542 346 aa4.87□□□□□ -1.63
LSM5-206ENST00000409987 WDR1O75083 606 aa4.87□□□□□ -1.63
LSM5-206ENST00000409987 GH1P01241 217 aa4.87□□□□□ -1.63
LSM5-206ENST00000409987 NGFRP08138 427 aa4.87□□□□□ -1.63
LSM5-206ENST00000409987 FAM106CPP0CH98 169 aa4.87□□□□□ -1.63
LSM5-206ENST00000409987 ETS1P14921 441 aa4.87□□□□□ -1.63
LSM5-206ENST00000409987 RPA1P27694 616 aa4.87□□□□□ -1.63
LSM5-206ENST00000409987 GNL1P36915 607 aaPredicted RBP4.87□□□□□ -1.63
LSM5-206ENST00000409987 USP8P40818 1118 aa4.87□□□□□ -1.63
LSM5-206ENST00000409987 WNT5AP41221 380 aa4.87□□□□□ -1.63
LSM5-206ENST00000409987 CDKN2AP42771 156 aaKnown RBP4.87□□□□□ -1.63
LSM5-206ENST00000409987 KIF5AQ12840 1032 aa4.87□□□□□ -1.63
LSM5-206ENST00000409987 GTF2H2Q13888 395 aa4.87□□□□□ -1.63
LSM5-206ENST00000409987 NR1D2Q14995 579 aa4.87□□□□□ -1.63
LSM5-206ENST00000409987 GCNT6Q5T4J0 391 aa4.87□□□□□ -1.63
LSM5-206ENST00000409987 GTF2H2CQ6P1K8 395 aa4.87□□□□□ -1.63
LSM5-206ENST00000409987 NEK5Q6P3R8 708 aa4.87□□□□□ -1.63
Retrieved 100 of 20,778 RNA–protein pairs in 53.5 ms