RNA–Protein interactions for RNA: ENST00000409333.1

SSB-202, Transcript of Sjogren syndrome antigen B, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SSB, Length 1,782 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSB-202ENST00000409333 CCDC6Q16204 474 aa16.31■□□□□ 0.2
SSB-202ENST00000409333 CYP2A13Q16696 494 aa16.31■□□□□ 0.2
SSB-202ENST00000409333 ZNF423Q2M1K9 1284 aa16.31■□□□□ 0.2
SSB-202ENST00000409333 HLA-BQ31612 363 aa16.31■□□□□ 0.2
SSB-202ENST00000409333 TRIM61Q5EBN2 209 aa16.31■□□□□ 0.2
SSB-202ENST00000409333 RABEPKQ7Z6M1 372 aa16.31■□□□□ 0.2
SSB-202ENST00000409333 SYVN1Q86TM6 617 aa16.31■□□□□ 0.2
SSB-202ENST00000409333 SLC25A45Q8N413 288 aa16.31■□□□□ 0.2
SSB-202ENST00000409333 LINC01555Q8NAE3 123 aa16.31■□□□□ 0.2
SSB-202ENST00000409333 CEP76Q8TAP6 659 aa16.31■□□□□ 0.2
SSB-202ENST00000409333 BCAS4Q8TDM0 211 aa16.31■□□□□ 0.2
SSB-202ENST00000409333 KCNA7Q96RP8 456 aa16.31■□□□□ 0.2
SSB-202ENST00000409333 ELAC2Q9BQ52 826 aaKnown RBP16.31■□□□□ 0.2
SSB-202ENST00000409333 FIS1Q9Y3D6 152 aa16.31■□□□□ 0.2
SSB-202ENST00000409333 MDC1Q14676 2089 aaKnown RBP16.3■□□□□ 0.2
SSB-202ENST00000409333 EPN2O95208 641 aa16.3■□□□□ 0.2
SSB-202ENST00000409333 MLYCDO95822 493 aa16.3■□□□□ 0.2
SSB-202ENST00000409333 VIPP01282 170 aa16.3■□□□□ 0.2
SSB-202ENST00000409333 SLC2A4P14672 509 aa16.3■□□□□ 0.2
SSB-202ENST00000409333 RXRGP48443 463 aa16.3■□□□□ 0.2
SSB-202ENST00000409333 RPL14P50914 215 aaKnown RBP16.3■□□□□ 0.2
SSB-202ENST00000409333 FOXA1P55317 472 aa16.3■□□□□ 0.2
SSB-202ENST00000409333 MAZP56270 477 aaKnown RBP16.3■□□□□ 0.2
SSB-202ENST00000409333 TRAF3Q13114 568 aa16.3■□□□□ 0.2
SSB-202ENST00000409333 GPR18Q14330 331 aa16.3■□□□□ 0.2
SSB-202ENST00000409333 ARHGAP19Q14CB8 494 aa16.3■□□□□ 0.2
SSB-202ENST00000409333 CLEC6AQ6EIG7 209 aa16.3■□□□□ 0.2
SSB-202ENST00000409333 CAPN13Q6MZZ7 669 aaPredicted RBP16.3■□□□□ 0.2
SSB-202ENST00000409333 SLC23A3Q6PIS1 610 aa16.3■□□□□ 0.2
SSB-202ENST00000409333 RFWD2Q8NHY2 731 aa16.3■□□□□ 0.2
SSB-202ENST00000409333 ZNF382Q96SR6 550 aa16.3■□□□□ 0.2
SSB-202ENST00000409333 SGPP1Q9BX95 441 aa16.3■□□□□ 0.2
SSB-202ENST00000409333 ARRDC1-AS1Q9H2J1 176 aa16.3■□□□□ 0.2
SSB-202ENST00000409333 SMOC1Q9H4F8 434 aa16.3■□□□□ 0.2
SSB-202ENST00000409333 IL21RQ9HBE5 538 aa16.3■□□□□ 0.2
SSB-202ENST00000409333 CCDC177Q9NQR7 707 aaPredicted RBP16.3■□□□□ 0.2
SSB-202ENST00000409333 POT1Q9NUX5 634 aa16.3■□□□□ 0.2
SSB-202ENST00000409333 SH2B3Q9UQQ2 575 aa16.3■□□□□ 0.2
SSB-202ENST00000409333 CUL9Q8IWT3 2517 aa16.29■□□□□ 0.2
SSB-202ENST00000409333 NOBOXO60393 691 aa16.29■□□□□ 0.2
SSB-202ENST00000409333 OR4F21O95013 312 aa16.29■□□□□ 0.2
SSB-202ENST00000409333 SNUPNO95149 360 aaKnown RBP16.29■□□□□ 0.2
SSB-202ENST00000409333 TGDSO95455 350 aa16.29■□□□□ 0.2
SSB-202ENST00000409333 ANXA6P08133 673 aa16.29■□□□□ 0.2
SSB-202ENST00000409333 EPHA8P29322 1005 aaPredicted RBP16.29■□□□□ 0.2
SSB-202ENST00000409333 MPLP40238 635 aa16.29■□□□□ 0.2
SSB-202ENST00000409333 ARL1P40616 181 aaPredicted RBP16.29■□□□□ 0.2
SSB-202ENST00000409333 CCNG1P51959 295 aa16.29■□□□□ 0.2
SSB-202ENST00000409333 ERVPABLB-1P60509 514 aa16.29■□□□□ 0.2
SSB-202ENST00000409333 CDC16Q13042 620 aa16.29■□□□□ 0.2
SSB-202ENST00000409333 TERF2Q15554 542 aa16.29■□□□□ 0.2
SSB-202ENST00000409333 LETMD1Q6P1Q0 360 aa16.29■□□□□ 0.2
SSB-202ENST00000409333 GPRIN3Q6ZVF9 776 aa16.29■□□□□ 0.2
SSB-202ENST00000409333 SDR16C5Q8N3Y7 309 aa16.29■□□□□ 0.2
SSB-202ENST00000409333 RAB42Q8N4Z0 105 aa16.29■□□□□ 0.2
SSB-202ENST00000409333 OR4F6Q8NGB9 312 aa16.29■□□□□ 0.2
SSB-202ENST00000409333 MAPK15Q8TD08 544 aa16.29■□□□□ 0.2
SSB-202ENST00000409333 ZNF473Q8WTR7 871 aaKnown RBP16.29■□□□□ 0.2
SSB-202ENST00000409333 ATP6V1E2Q96A05 226 aa16.29■□□□□ 0.2
SSB-202ENST00000409333 EPB41L3Q9Y2J2 1087 aaPredicted RBP16.29■□□□□ 0.2
SSB-202ENST00000409333 WDR87Q6ZQQ6 2873 aa16.28■□□□□ 0.2
SSB-202ENST00000409333 A0A1B0GTQ1 180 aa16.28■□□□□ 0.2
SSB-202ENST00000409333 A0A1W2PPV9 198 aa16.28■□□□□ 0.2
SSB-202ENST00000409333 NDUFAB1O14561 156 aa16.28■□□□□ 0.2
SSB-202ENST00000409333 PRAMEF4O60810 478 aa16.28■□□□□ 0.2
SSB-202ENST00000409333 KATNA1O75449 491 aa16.28■□□□□ 0.2
SSB-202ENST00000409333 ESRRBO95718 433 aa16.28■□□□□ 0.2
SSB-202ENST00000409333 OTCP00480 354 aa16.28■□□□□ 0.2
SSB-202ENST00000409333 GIMD1P0DJR0 217 aa16.28■□□□□ 0.2
SSB-202ENST00000409333 TROVE2P10155 538 aaKnown RBP eCLIP16.28■□□□□ 0.2
SSB-202ENST00000409333 PSMB5P28074 263 aa16.28■□□□□ 0.2
SSB-202ENST00000409333 HSD17B2P37059 387 aa16.28■□□□□ 0.2
SSB-202ENST00000409333 PIK3CGP48736 1102 aa16.28■□□□□ 0.2
SSB-202ENST00000409333 HHEXQ03014 270 aa16.28■□□□□ 0.2
SSB-202ENST00000409333 PRAMEF9Q5VWM5 478 aa16.28■□□□□ 0.2
SSB-202ENST00000409333 PRAMEF13Q5VWM6 474 aa16.28■□□□□ 0.2
SSB-202ENST00000409333 ZC3H14Q6PJT7 736 aaKnown RBP16.28■□□□□ 0.2
SSB-202ENST00000409333 MAVSQ7Z434 540 aa16.28■□□□□ 0.2
SSB-202ENST00000409333 SPATA21Q7Z572 469 aa16.28■□□□□ 0.2
SSB-202ENST00000409333 PIGWQ7Z7B1 504 aa16.28■□□□□ 0.2
SSB-202ENST00000409333 SLC9B2Q86UD5 537 aa16.28■□□□□ 0.2
SSB-202ENST00000409333 ZNF761Q86XN6 746 aaPredicted RBP16.28■□□□□ 0.2
SSB-202ENST00000409333 OR2I1PQ8NGU4 316 aa16.28■□□□□ 0.2
SSB-202ENST00000409333 OR2L8Q8NGY9 312 aa16.28■□□□□ 0.2
SSB-202ENST00000409333 LCN9Q8WX39 176 aa16.28■□□□□ 0.2
SSB-202ENST00000409333 GRAMD1AQ96CP6 724 aa16.28■□□□□ 0.2
SSB-202ENST00000409333 PRR11Q96HE9 360 aaPredicted RBP16.28■□□□□ 0.2
SSB-202ENST00000409333 LRFN3Q9BTN0 628 aa16.28■□□□□ 0.2
SSB-202ENST00000409333 RAB11FIP5Q9BXF6 653 aa16.28■□□□□ 0.2
SSB-202ENST00000409333 TRIM55Q9BYV6 548 aa16.28■□□□□ 0.2
SSB-202ENST00000409333 GAREM1Q9H706 876 aa16.28■□□□□ 0.2
SSB-202ENST00000409333 DCTN4Q9UJW0 460 aa16.28■□□□□ 0.2
SSB-202ENST00000409333 SLC6A14Q9UN76 642 aa16.28■□□□□ 0.2
SSB-202ENST00000409333 ZNF839A8K0R7 811 aa16.28■□□□□ 0.2
SSB-202ENST00000409333 E7EQ34 232 aa16.28■□□□□ 0.2
SSB-202ENST00000409333 SNX3O60493 162 aa16.28■□□□□ 0.2
SSB-202ENST00000409333 JUNP05412 331 aaKnown RBP16.28■□□□□ 0.2
SSB-202ENST00000409333 NPPBP16860 134 aa16.28■□□□□ 0.2
SSB-202ENST00000409333 PLCL1Q15111 1095 aa16.28■□□□□ 0.2
SSB-202ENST00000409333 THEMIS2Q5TEJ8 643 aa16.28■□□□□ 0.2
Retrieved 100 of 20,778 RNA–protein pairs in 49.9 ms