RNA–Protein interactions for RNA: ENST00000409101.7

SCN3A-203, Transcript of sodium voltage-gated channel alpha subunit 3, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene SCN3A, Length 6,599 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN3A-203ENST00000409101 SLC22A8Q8TCC7 542 aa4.9□□□□□ -1.63
SCN3A-203ENST00000409101 AENQ8WTP8 325 aaKnown RBP4.9□□□□□ -1.63
SCN3A-203ENST00000409101 TM9SF4Q92544 642 aa4.9□□□□□ -1.63
SCN3A-203ENST00000409101 ALG3Q92685 438 aa4.9□□□□□ -1.63
SCN3A-203ENST00000409101 GLYATL1Q969I3 302 aa4.9□□□□□ -1.63
SCN3A-203ENST00000409101 IGSF8Q969P0 613 aa4.9□□□□□ -1.63
SCN3A-203ENST00000409101 TDRD1Q9BXT4 1180 aaKnown RBP4.9□□□□□ -1.63
SCN3A-203ENST00000409101 LINC00597Q9H2U6 94 aa4.9□□□□□ -1.63
SCN3A-203ENST00000409101 MMADHCQ9H3L0 296 aaPredicted RBP4.9□□□□□ -1.63
SCN3A-203ENST00000409101 PLEKHA1Q9HB21 404 aa4.9□□□□□ -1.63
SCN3A-203ENST00000409101 MAGEE1Q9HCI5 957 aa4.9□□□□□ -1.63
SCN3A-203ENST00000409101 DNMT3BQ9UBC3 853 aaKnown RBP4.9□□□□□ -1.63
SCN3A-203ENST00000409101 ZNF282Q9UDV7 671 aaPredicted RBP4.9□□□□□ -1.63
SCN3A-203ENST00000409101 IKZF2Q9UKS7 526 aa4.9□□□□□ -1.63
SCN3A-203ENST00000409101 RGSL1A5PLK6 1076 aa4.9□□□□□ -1.63
SCN3A-203ENST00000409101 RCCD1A6NED2 376 aa4.9□□□□□ -1.63
SCN3A-203ENST00000409101 TMEM189-UBE2V1I3L0A0 370 aa4.9□□□□□ -1.63
SCN3A-203ENST00000409101 CASKO14936 926 aa4.9□□□□□ -1.63
SCN3A-203ENST00000409101 CST1P01037 141 aa4.9□□□□□ -1.63
SCN3A-203ENST00000409101 CD63P08962 238 aa4.9□□□□□ -1.63
SCN3A-203ENST00000409101 NR2C1P13056 603 aa4.9□□□□□ -1.63
SCN3A-203ENST00000409101 MPSTP25325 297 aa4.9□□□□□ -1.63
SCN3A-203ENST00000409101 EPHA3P29320 983 aa4.9□□□□□ -1.63
SCN3A-203ENST00000409101 SOX9P48436 509 aa4.9□□□□□ -1.63
SCN3A-203ENST00000409101 IDH2P48735 452 aaKnown RBP4.9□□□□□ -1.63
SCN3A-203ENST00000409101 DNASE1L1P49184 302 aa4.9□□□□□ -1.63
SCN3A-203ENST00000409101 CRISP3P54108 245 aa4.9□□□□□ -1.63
SCN3A-203ENST00000409101 CTBP2P56545 445 aa4.9□□□□□ -1.63
SCN3A-203ENST00000409101 SELENOVP59797 346 aa4.9□□□□□ -1.63
SCN3A-203ENST00000409101 GBX1Q14549 363 aa4.9□□□□□ -1.63
SCN3A-203ENST00000409101 SEMA3AQ14563 771 aa4.9□□□□□ -1.63
SCN3A-203ENST00000409101 ZNF460Q14592 562 aa4.9□□□□□ -1.63
SCN3A-203ENST00000409101 PRKD1Q15139 912 aaPredicted RBP4.9□□□□□ -1.63
SCN3A-203ENST00000409101 TMEM240Q5SV17 173 aa4.9□□□□□ -1.63
SCN3A-203ENST00000409101 DCAF12L1Q5VU92 463 aa4.9□□□□□ -1.63
SCN3A-203ENST00000409101 MZT2AQ6P582 158 aa4.9□□□□□ -1.63
SCN3A-203ENST00000409101 Q6ZVL8 140 aa4.9□□□□□ -1.63
SCN3A-203ENST00000409101 C19orf18Q8NEA5 215 aa4.9□□□□□ -1.63
SCN3A-203ENST00000409101 EDAQ92838 391 aa4.9□□□□□ -1.63
SCN3A-203ENST00000409101 MTERF1Q99551 399 aaKnown RBP4.9□□□□□ -1.63
SCN3A-203ENST00000409101 EPYCQ99645 322 aa4.9□□□□□ -1.63
SCN3A-203ENST00000409101 LRMDAQ9H2I8 198 aa4.9□□□□□ -1.63
SCN3A-203ENST00000409101 XKR8Q9H6D3 395 aa4.9□□□□□ -1.63
SCN3A-203ENST00000409101 RMI1Q9H9A7 625 aa4.9□□□□□ -1.63
SCN3A-203ENST00000409101 TBC1D23Q9NUY8 699 aa4.9□□□□□ -1.63
SCN3A-203ENST00000409101 MAGEL2Q9UJ55 1249 aa4.9□□□□□ -1.63
SCN3A-203ENST00000409101 SAMHD1Q9Y3Z3 626 aaKnown RBP4.9□□□□□ -1.63
SCN3A-203ENST00000409101 AP4S1Q9Y587 144 aa4.9□□□□□ -1.63
SCN3A-203ENST00000409101 RGPD2P0DJD1 1756 aa4.9□□□□□ -1.63
SCN3A-203ENST00000409101 TRPM3Q9HCF6 1732 aaPredicted RBP4.89□□□□□ -1.63
SCN3A-203ENST00000409101 EFCAB10A6NFE3 127 aa4.89□□□□□ -1.63
SCN3A-203ENST00000409101 MAGEB17A8MXT2 336 aa4.89□□□□□ -1.63
SCN3A-203ENST00000409101 E7EQ34 232 aa4.89□□□□□ -1.63
SCN3A-203ENST00000409101 NPIPA5E9PKD4 350 aa4.89□□□□□ -1.63
SCN3A-203ENST00000409101 PTGESO14684 152 aa4.89□□□□□ -1.63
SCN3A-203ENST00000409101 TGDSO95455 350 aa4.89□□□□□ -1.63
SCN3A-203ENST00000409101 KLK1P06870 262 aa4.89□□□□□ -1.63
SCN3A-203ENST00000409101 ARSFP54793 590 aa4.89□□□□□ -1.63
SCN3A-203ENST00000409101 ERVFC1P60507 584 aa4.89□□□□□ -1.63
SCN3A-203ENST00000409101 ZNF33AQ06730 810 aa4.89□□□□□ -1.63
SCN3A-203ENST00000409101 EPS8Q12929 822 aa4.89□□□□□ -1.63
SCN3A-203ENST00000409101 ZNF234Q14588 700 aa4.89□□□□□ -1.63
SCN3A-203ENST00000409101 TIGD2Q4W5G0 525 aa4.89□□□□□ -1.63
SCN3A-203ENST00000409101 SLC22A15Q8IZD6 547 aa4.89□□□□□ -1.63
SCN3A-203ENST00000409101 OR6C4Q8NGE1 309 aa4.89□□□□□ -1.63
SCN3A-203ENST00000409101 TSEN15Q8WW01 171 aaKnown RBP4.89□□□□□ -1.63
SCN3A-203ENST00000409101 OR8D2Q9GZM6 311 aa4.89□□□□□ -1.63
SCN3A-203ENST00000409101 MYLK2Q9H1R3 596 aa4.89□□□□□ -1.63
SCN3A-203ENST00000409101 SEMA6AQ9H2E6 1030 aa4.89□□□□□ -1.63
SCN3A-203ENST00000409101 PNPOQ9NVS9 261 aa4.89□□□□□ -1.63
SCN3A-203ENST00000409101 NPIPA1Q9UND3 350 aa4.89□□□□□ -1.63
SCN3A-203ENST00000409101 OAS3Q9Y6K5 1087 aaKnown RBP4.89□□□□□ -1.63
SCN3A-203ENST00000409101 H3BUI4 141 aa4.89□□□□□ -1.63
SCN3A-203ENST00000409101 TRIM38O00635 465 aa4.89□□□□□ -1.63
SCN3A-203ENST00000409101 PDE5AO76074 875 aa4.89□□□□□ -1.63
SCN3A-203ENST00000409101 ERCC1P07992 297 aaPredicted RBP4.89□□□□□ -1.63
SCN3A-203ENST00000409101 CDH1P12830 882 aa4.89□□□□□ -1.63
SCN3A-203ENST00000409101 GP1BBP13224 206 aa4.89□□□□□ -1.63
SCN3A-203ENST00000409101 ARG2P78540 354 aa4.89□□□□□ -1.63
SCN3A-203ENST00000409101 CAMK1Q14012 370 aa4.89□□□□□ -1.63
SCN3A-203ENST00000409101 HERC3Q15034 1050 aa4.89□□□□□ -1.63
SCN3A-203ENST00000409101 SLC35G1Q2M3R5 365 aa4.89□□□□□ -1.63
SCN3A-203ENST00000409101 ANKRD22Q5VYY1 191 aa4.89□□□□□ -1.63
SCN3A-203ENST00000409101 FSTL4Q6MZW2 842 aa4.89□□□□□ -1.63
SCN3A-203ENST00000409101 ANKRD33Q7Z3H0 272 aa4.89□□□□□ -1.63
SCN3A-203ENST00000409101 RBM12BQ8IXT5 1001 aaKnown RBP4.89□□□□□ -1.63
SCN3A-203ENST00000409101 UBALD2Q8IYN6 164 aa4.89□□□□□ -1.63
SCN3A-203ENST00000409101 CPSF7Q8N684 471 aaKnown RBP4.89□□□□□ -1.63
SCN3A-203ENST00000409101 ADAMTS18Q8TE60 1221 aa4.89□□□□□ -1.63
SCN3A-203ENST00000409101 SLC38A4Q969I6 547 aa4.89□□□□□ -1.63
SCN3A-203ENST00000409101 PTCD3Q96EY7 689 aaKnown RBP4.89□□□□□ -1.63
SCN3A-203ENST00000409101 NSMCE3Q96MG7 304 aa4.89□□□□□ -1.63
SCN3A-203ENST00000409101 R3HDMLQ9H3Y0 253 aa4.89□□□□□ -1.63
SCN3A-203ENST00000409101 VRTNQ9H8Y1 702 aa4.89□□□□□ -1.63
SCN3A-203ENST00000409101 L2HGDHQ9H9P8 463 aa4.89□□□□□ -1.63
SCN3A-203ENST00000409101 MRM3Q9HC36 420 aaKnown RBP4.89□□□□□ -1.63
SCN3A-203ENST00000409101 PREBQ9HCU5 417 aa4.89□□□□□ -1.63
SCN3A-203ENST00000409101 TIGARQ9NQ88 270 aa4.89□□□□□ -1.63
SCN3A-203ENST00000409101 PTGFRNQ9P2B2 879 aa4.89□□□□□ -1.63
SCN3A-203ENST00000409101 ZFR2Q9UPR6 939 aaKnown RBP4.89□□□□□ -1.63
Retrieved 100 of 20,778 RNA–protein pairs in 27.4 ms