RNA–Protein interactions for RNA: ENST00000406938.2

CHKB-201, Transcript of choline kinase beta, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CHKB, Length 1,638 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHKB-201ENST00000406938 DNAJC11Q9NVH1 559 aa19.84■□□□□ 0.77
CHKB-201ENST00000406938 INTS7Q9NVH2 962 aaKnown RBP19.84■□□□□ 0.77
CHKB-201ENST00000406938 CACNA1HO95180 2353 aa19.83■□□□□ 0.77
CHKB-201ENST00000406938 ZNF839A8K0R7 811 aa19.83■□□□□ 0.76
CHKB-201ENST00000406938 GIMD1P0DJR0 217 aa19.83■□□□□ 0.76
CHKB-201ENST00000406938 EPB42P16452 691 aa19.83■□□□□ 0.76
CHKB-201ENST00000406938 MPSTP25325 297 aa19.83■□□□□ 0.76
CHKB-201ENST00000406938 PIK3CGP48736 1102 aa19.83■□□□□ 0.76
CHKB-201ENST00000406938 PLCL1Q15111 1095 aa19.83■□□□□ 0.76
CHKB-201ENST00000406938 RBBP7Q16576 425 aa19.83■□□□□ 0.76
CHKB-201ENST00000406938 C6orf132Q5T0Z8 1188 aa19.83■□□□□ 0.76
CHKB-201ENST00000406938 CAPN13Q6MZZ7 669 aaPredicted RBP19.83■□□□□ 0.76
CHKB-201ENST00000406938 SUSD1Q6UWL2 747 aa19.83■□□□□ 0.76
CHKB-201ENST00000406938 SNX31Q8N9S9 440 aa19.83■□□□□ 0.76
CHKB-201ENST00000406938 LCN9Q8WX39 176 aa19.83■□□□□ 0.76
CHKB-201ENST00000406938 GTPBP2Q9BX10 602 aaKnown RBP19.83■□□□□ 0.76
CHKB-201ENST00000406938 SGPP1Q9BX95 441 aa19.83■□□□□ 0.76
CHKB-201ENST00000406938 FAM107BQ9H098 131 aa19.83■□□□□ 0.76
CHKB-201ENST00000406938 NOL11Q9H8H0 719 aaKnown RBP19.83■□□□□ 0.76
CHKB-201ENST00000406938 IPPKQ9H8X2 491 aa19.83■□□□□ 0.76
CHKB-201ENST00000406938 EML4Q9HC35 981 aaKnown RBP19.83■□□□□ 0.76
CHKB-201ENST00000406938 A0A1B0GTL3 188 aa19.82■□□□□ 0.76
CHKB-201ENST00000406938 KHNYNO15037 678 aaKnown RBP19.82■□□□□ 0.76
CHKB-201ENST00000406938 MLYCDO95822 493 aa19.82■□□□□ 0.76
CHKB-201ENST00000406938 ENGP17813 658 aa19.82■□□□□ 0.76
CHKB-201ENST00000406938 EPORP19235 508 aa19.82■□□□□ 0.76
CHKB-201ENST00000406938 SHMT2P34897 504 aa19.82■□□□□ 0.76
CHKB-201ENST00000406938 FASLGP48023 281 aa19.82■□□□□ 0.76
CHKB-201ENST00000406938 GALNT1Q10472 559 aaPredicted RBP19.82■□□□□ 0.76
CHKB-201ENST00000406938 OGFOD3Q6PK18 319 aa19.82■□□□□ 0.76
CHKB-201ENST00000406938 CUZD1Q86UP6 607 aa19.82■□□□□ 0.76
CHKB-201ENST00000406938 C17orf82Q86X59 251 aaPredicted RBP19.82■□□□□ 0.76
CHKB-201ENST00000406938 ARL14Q8N4G2 192 aa19.82■□□□□ 0.76
CHKB-201ENST00000406938 ZNF781Q8N8C0 355 aa19.82■□□□□ 0.76
CHKB-201ENST00000406938 AVL9Q8NBF6 648 aa19.82■□□□□ 0.76
CHKB-201ENST00000406938 KYQ8NBH2 561 aa19.82■□□□□ 0.76
CHKB-201ENST00000406938 SUMF1Q8NBK3 374 aa19.82■□□□□ 0.76
CHKB-201ENST00000406938 OR52B6Q8NGF0 335 aa19.82■□□□□ 0.76
CHKB-201ENST00000406938 OR2L8Q8NGY9 312 aa19.82■□□□□ 0.76
CHKB-201ENST00000406938 AGR3Q8TD06 166 aa19.82■□□□□ 0.76
CHKB-201ENST00000406938 ZFPM2Q8WW38 1151 aa19.82■□□□□ 0.76
CHKB-201ENST00000406938 OR4K3Q96R72 315 aa19.82■□□□□ 0.76
CHKB-201ENST00000406938 EPN3Q9H201 632 aa19.82■□□□□ 0.76
CHKB-201ENST00000406938 CUL9Q8IWT3 2517 aa19.81■□□□□ 0.76
CHKB-201ENST00000406938 FRYLO94915 3013 aa19.81■□□□□ 0.76
CHKB-201ENST00000406938 SRRM3A6NNA2 597 aaPredicted RBP19.81■□□□□ 0.76
CHKB-201ENST00000406938 OR7A17O14581 309 aa19.81■□□□□ 0.76
CHKB-201ENST00000406938 SNUPNO95149 360 aaKnown RBP19.81■□□□□ 0.76
CHKB-201ENST00000406938 SH3BP2P78314 561 aa19.81■□□□□ 0.76
CHKB-201ENST00000406938 CHCHD2P9Q5T1J5 151 aaPredicted RBP19.81■□□□□ 0.76
CHKB-201ENST00000406938 AMIGO1Q86WK6 493 aa19.81■□□□□ 0.76
CHKB-201ENST00000406938 CRLF3Q8IUI8 442 aa19.81■□□□□ 0.76
CHKB-201ENST00000406938 RBM12BQ8IXT5 1001 aaKnown RBP19.81■□□□□ 0.76
CHKB-201ENST00000406938 GPR156Q8NFN8 814 aa19.81■□□□□ 0.76
CHKB-201ENST00000406938 HMGCLL1Q8TB92 370 aa19.81■□□□□ 0.76
CHKB-201ENST00000406938 AGAP11Q8TF27 550 aa19.81■□□□□ 0.76
CHKB-201ENST00000406938 SMPDL3AQ92484 453 aa19.81■□□□□ 0.76
CHKB-201ENST00000406938 ZNF382Q96SR6 550 aa19.81■□□□□ 0.76
CHKB-201ENST00000406938 RABEP2Q9H5N1 569 aa19.81■□□□□ 0.76
CHKB-201ENST00000406938 STN1Q9H668 368 aaKnown RBP19.81■□□□□ 0.76
CHKB-201ENST00000406938 TNFRSF12AQ9NP84 129 aa19.81■□□□□ 0.76
CHKB-201ENST00000406938 MID1IP1Q9NPA3 183 aa19.81■□□□□ 0.76
CHKB-201ENST00000406938 NLGN3Q9NZ94 848 aa19.81■□□□□ 0.76
CHKB-201ENST00000406938 MARCOQ9UEW3 520 aaPredicted RBP19.81■□□□□ 0.76
CHKB-201ENST00000406938 RAP2CQ9Y3L5 183 aa19.81■□□□□ 0.76
CHKB-201ENST00000406938 GPR179Q6PRD1 2367 aa19.81■□□□□ 0.76
CHKB-201ENST00000406938 ADAMTS9Q9P2N4 1935 aa19.81■□□□□ 0.76
CHKB-201ENST00000406938 KATNA1O75449 491 aa19.8■□□□□ 0.76
CHKB-201ENST00000406938 RETP07949 1114 aa19.8■□□□□ 0.76
CHKB-201ENST00000406938 CCND1P24385 295 aa19.8■□□□□ 0.76
CHKB-201ENST00000406938 PRDX3P30048 256 aaKnown RBP19.8■□□□□ 0.76
CHKB-201ENST00000406938 ARL1P40616 181 aaPredicted RBP19.8■□□□□ 0.76
CHKB-201ENST00000406938 CDC16Q13042 620 aa19.8■□□□□ 0.76
CHKB-201ENST00000406938 PRKAA1Q13131 559 aa19.8■□□□□ 0.76
CHKB-201ENST00000406938 C14orf28Q4W4Y0 310 aa19.8■□□□□ 0.76
CHKB-201ENST00000406938 TMEM26Q6ZUK4 368 aa19.8■□□□□ 0.76
CHKB-201ENST00000406938 ZNF761Q86XN6 746 aaPredicted RBP19.8■□□□□ 0.76
CHKB-201ENST00000406938 ARL10Q8N8L6 244 aa19.8■□□□□ 0.76
CHKB-201ENST00000406938 DCBLD1Q8N8Z6 715 aa19.8■□□□□ 0.76
CHKB-201ENST00000406938 OR4E2Q8NGC2 313 aa19.8■□□□□ 0.76
CHKB-201ENST00000406938 CDK15Q96Q40 435 aa19.8■□□□□ 0.76
CHKB-201ENST00000406938 ILKAPQ9H0C8 392 aaPredicted RBP19.8■□□□□ 0.76
CHKB-201ENST00000406938 SRMSQ9H3Y6 488 aa19.8■□□□□ 0.76
CHKB-201ENST00000406938 OR6C2Q9NZP2 312 aa19.8■□□□□ 0.76
CHKB-201ENST00000406938 HAO1Q9UJM8 370 aa19.8■□□□□ 0.76
CHKB-201ENST00000406938 A0A1W2PPV9 198 aa19.8■□□□□ 0.76
CHKB-201ENST00000406938 OTCP00480 354 aa19.8■□□□□ 0.76
CHKB-201ENST00000406938 KITP10721 976 aa19.8■□□□□ 0.76
CHKB-201ENST00000406938 DRD4P21917 467 aa19.8■□□□□ 0.76
CHKB-201ENST00000406938 CCNG1P51959 295 aa19.8■□□□□ 0.76
CHKB-201ENST00000406938 TRAF3Q13114 568 aa19.8■□□□□ 0.76
CHKB-201ENST00000406938 SH2D4BQ5SQS7 431 aa19.8■□□□□ 0.76
CHKB-201ENST00000406938 THEMIS2Q5TEJ8 643 aa19.8■□□□□ 0.76
CHKB-201ENST00000406938 PRAMEF13Q5VWM6 474 aa19.8■□□□□ 0.76
CHKB-201ENST00000406938 CGB2Q6NT52 195 aa19.8■□□□□ 0.76
CHKB-201ENST00000406938 SYVN1Q86TM6 617 aa19.8■□□□□ 0.76
CHKB-201ENST00000406938 MINDY1Q8N5J2 469 aa19.8■□□□□ 0.76
CHKB-201ENST00000406938 ATP6V1E2Q96A05 226 aa19.8■□□□□ 0.76
CHKB-201ENST00000406938 ZDHHC2Q9UIJ5 367 aa19.8■□□□□ 0.76
CHKB-201ENST00000406938 ZNF225Q9UK10 706 aa19.8■□□□□ 0.76
Retrieved 100 of 20,778 RNA–protein pairs in 33.9 ms