RNA–Protein interactions for RNA: ENST00000403162.7

CCDC47-202, Transcript of coiled-coil domain containing 47, humanhuman

APPRIS P1 TSL 2 BASIC

Gene CCDC47, Length 2,195 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC47-202ENST00000403162 CNIH3Q8TBE1 160 aa19.34■□□□□ 0.69
CCDC47-202ENST00000403162 MCOLN3Q8TDD5 553 aa19.34■□□□□ 0.69
CCDC47-202ENST00000403162 NETO1Q8TDF5 533 aa19.34■□□□□ 0.69
CCDC47-202ENST00000403162 RORBQ92753 470 aa19.34■□□□□ 0.69
CCDC47-202ENST00000403162 PYURFQ96I23 114 aa19.34■□□□□ 0.69
CCDC47-202ENST00000403162 PSD2Q9BQI7 771 aa19.34■□□□□ 0.69
CCDC47-202ENST00000403162 FAM126AQ9BYI3 521 aaPredicted RBP19.34■□□□□ 0.69
CCDC47-202ENST00000403162 LRTM1Q9HBL6 345 aa19.34■□□□□ 0.69
CCDC47-202ENST00000403162 FBXO8Q9NRD0 319 aa19.34■□□□□ 0.69
CCDC47-202ENST00000403162 EXD2Q9NVH0 621 aa19.34■□□□□ 0.69
CCDC47-202ENST00000403162 C1orf109Q9NX04 203 aa19.34■□□□□ 0.69
CCDC47-202ENST00000403162 IL17CQ9P0M4 197 aa19.34■□□□□ 0.69
CCDC47-202ENST00000403162 TRPS1Q9UHF7 1281 aa19.34■□□□□ 0.69
CCDC47-202ENST00000403162 TSR3Q9UJK0 312 aaKnown RBP19.34■□□□□ 0.69
CCDC47-202ENST00000403162 HSPE1-MOB4S4R3N1 261 aa19.34■□□□□ 0.69
CCDC47-202ENST00000403162 FFAR3O14843 346 aa19.34■□□□□ 0.69
CCDC47-202ENST00000403162 GPR42O15529 346 aa19.34■□□□□ 0.69
CCDC47-202ENST00000403162 GPR39O43194 453 aa19.34■□□□□ 0.69
CCDC47-202ENST00000403162 XPNPEP2O43895 674 aa19.34■□□□□ 0.69
CCDC47-202ENST00000403162 JRKO75564 520 aa19.34■□□□□ 0.69
CCDC47-202ENST00000403162 CA8P35219 290 aa19.34■□□□□ 0.69
CCDC47-202ENST00000403162 RPS24P62847 133 aaKnown RBP19.34■□□□□ 0.69
CCDC47-202ENST00000403162 IL5RAQ01344 420 aa19.34■□□□□ 0.69
CCDC47-202ENST00000403162 HMGCS1Q01581 520 aa19.34■□□□□ 0.69
CCDC47-202ENST00000403162 PTPRRQ15256 657 aa19.34■□□□□ 0.69
CCDC47-202ENST00000403162 SUSD1Q6UWL2 747 aa19.34■□□□□ 0.69
CCDC47-202ENST00000403162 DET1Q7L5Y6 550 aa19.34■□□□□ 0.69
CCDC47-202ENST00000403162 UBTD2Q8WUN7 234 aa19.34■□□□□ 0.69
CCDC47-202ENST00000403162 YIPF6Q96EC8 236 aa19.34■□□□□ 0.69
CCDC47-202ENST00000403162 FAM120BQ96EK7 910 aaKnown RBP19.34■□□□□ 0.69
CCDC47-202ENST00000403162 ZFP14Q9HCL3 533 aa19.34■□□□□ 0.69
CCDC47-202ENST00000403162 MRPL17Q9NRX2 175 aaKnown RBP19.34■□□□□ 0.69
CCDC47-202ENST00000403162 FARSBQ9NSD9 589 aaKnown RBP19.34■□□□□ 0.69
CCDC47-202ENST00000403162 MAN2B2Q9Y2E5 1009 aa19.34■□□□□ 0.69
CCDC47-202ENST00000403162 PKP3Q9Y446 797 aa19.34■□□□□ 0.69
CCDC47-202ENST00000403162 ANGPTL3Q9Y5C1 460 aa19.34■□□□□ 0.69
CCDC47-202ENST00000403162 PCDHB14Q9Y5E9 798 aa19.34■□□□□ 0.69
CCDC47-202ENST00000403162 ULK1O75385 1050 aa19.33■□□□□ 0.69
CCDC47-202ENST00000403162 ALOX5P09917 674 aa19.33■□□□□ 0.69
CCDC47-202ENST00000403162 RPS3P23396 243 aaKnown RBP eCLIP19.33■□□□□ 0.697e-10■■■■□ 20.1
CCDC47-202ENST00000403162 IGFBP5P24593 272 aa19.33■□□□□ 0.69
CCDC47-202ENST00000403162 RXRGP48443 463 aa19.33■□□□□ 0.69
CCDC47-202ENST00000403162 SLC11A2P49281 568 aa19.33■□□□□ 0.69
CCDC47-202ENST00000403162 RGS4P49798 205 aa19.33■□□□□ 0.69
CCDC47-202ENST00000403162 CXCR4P61073 352 aa19.33■□□□□ 0.69
CCDC47-202ENST00000403162 USP39Q53GS9 565 aaKnown RBP19.33■□□□□ 0.69
CCDC47-202ENST00000403162 SLC8B1Q6J4K2 584 aa19.33■□□□□ 0.69
CCDC47-202ENST00000403162 METTL2BQ6P1Q9 378 aaKnown RBP19.33■□□□□ 0.69
CCDC47-202ENST00000403162 HOMEZQ8IX15 550 aa19.33■□□□□ 0.69
CCDC47-202ENST00000403162 MFSD4AQ8N468 514 aa19.33■□□□□ 0.69
CCDC47-202ENST00000403162 ZFP90Q8TF47 636 aa19.33■□□□□ 0.69
CCDC47-202ENST00000403162 GDF15Q99988 308 aa19.33■□□□□ 0.69
CCDC47-202ENST00000403162 CLSTN3Q9BQT9 956 aa19.33■□□□□ 0.69
CCDC47-202ENST00000403162 NTMT1Q9BV86 223 aa19.33■□□□□ 0.69
CCDC47-202ENST00000403162 CD244Q9BZW8 370 aa19.33■□□□□ 0.69
CCDC47-202ENST00000403162 KCNH6Q9H252 994 aa19.33■□□□□ 0.69
CCDC47-202ENST00000403162 DUSP21Q9H596 190 aa19.33■□□□□ 0.69
CCDC47-202ENST00000403162 SLC6A13Q9NSD5 602 aa19.33■□□□□ 0.69
CCDC47-202ENST00000403162 OPTCQ9UBM4 332 aa19.33■□□□□ 0.69
CCDC47-202ENST00000403162 KLQ9UEF7 1012 aa19.33■□□□□ 0.69
CCDC47-202ENST00000403162 FBXO10Q9UK96 956 aa19.33■□□□□ 0.69
CCDC47-202ENST00000403162 ZNF490Q9ULM2 529 aaPredicted RBP19.33■□□□□ 0.69
CCDC47-202ENST00000403162 ERVW-1Q9UQF0 538 aa19.33■□□□□ 0.69
CCDC47-202ENST00000403162 A0A096LPI6 279 aa19.33■□□□□ 0.68
CCDC47-202ENST00000403162 MTMR11A4FU01 709 aa19.33■□□□□ 0.68
CCDC47-202ENST00000403162 AREL1O15033 823 aa19.33■□□□□ 0.68
CCDC47-202ENST00000403162 SEC22BO75396 215 aa19.33■□□□□ 0.68
CCDC47-202ENST00000403162 ARHGEF15O94989 841 aa19.33■□□□□ 0.68
CCDC47-202ENST00000403162 GUCA1CO95843 209 aa19.33■□□□□ 0.68
CCDC47-202ENST00000403162 CA3P07451 260 aa19.33■□□□□ 0.68
CCDC47-202ENST00000403162 RHOCP08134 193 aa19.33■□□□□ 0.68
CCDC47-202ENST00000403162 PIK3CGP48736 1102 aa19.33■□□□□ 0.68
CCDC47-202ENST00000403162 SLC35A2P78381 396 aa19.33■□□□□ 0.68
CCDC47-202ENST00000403162 KEAP1Q14145 624 aa19.33■□□□□ 0.68
CCDC47-202ENST00000403162 DGUOKQ16854 277 aa19.33■□□□□ 0.68
CCDC47-202ENST00000403162 ADPRMQ3LIE5 342 aa19.33■□□□□ 0.68
CCDC47-202ENST00000403162 CPZQ66K79 652 aa19.33■□□□□ 0.68
CCDC47-202ENST00000403162 PTRHD1Q6GMV3 140 aaKnown RBP19.33■□□□□ 0.68
CCDC47-202ENST00000403162 CAPN13Q6MZZ7 669 aaPredicted RBP19.33■□□□□ 0.68
CCDC47-202ENST00000403162 SPRED2Q7Z698 418 aa19.33■□□□□ 0.68
CCDC47-202ENST00000403162 B3GNT8Q7Z7M8 397 aa19.33■□□□□ 0.68
CCDC47-202ENST00000403162 SEPT5Q99719 369 aaPredicted RBP19.33■□□□□ 0.68
CCDC47-202ENST00000403162 CIPCQ9C0C6 399 aa19.33■□□□□ 0.68
CCDC47-202ENST00000403162 CRISPLD1Q9H336 500 aa19.33■□□□□ 0.68
CCDC47-202ENST00000403162 TPRKBQ9Y3C4 175 aa19.33■□□□□ 0.68
CCDC47-202ENST00000403162 RWDD3Q9Y3V2 267 aa19.33■□□□□ 0.68
CCDC47-202ENST00000403162 PCDHGA10Q9Y5H3 936 aa19.33■□□□□ 0.68
CCDC47-202ENST00000403162 U3KQV3 271 aa19.33■□□□□ 0.68
CCDC47-202ENST00000403162 M0R3G1 203 aa19.32■□□□□ 0.68
CCDC47-202ENST00000403162 CBX4O00257 560 aa19.32■□□□□ 0.68
CCDC47-202ENST00000403162 MANBAO00462 879 aa19.32■□□□□ 0.68
CCDC47-202ENST00000403162 EBLN1P0CF75 366 aa19.32■□□□□ 0.68
CCDC47-202ENST00000403162 HOXB9P17482 250 aaPredicted RBP19.32■□□□□ 0.68
CCDC47-202ENST00000403162 CD6P30203 668 aa19.32■□□□□ 0.68
CCDC47-202ENST00000403162 SERPINB10P48595 397 aa19.32■□□□□ 0.68
CCDC47-202ENST00000403162 SMARCB1Q12824 385 aa19.32■□□□□ 0.68
CCDC47-202ENST00000403162 NEK10Q6ZWH5 1172 aa19.32■□□□□ 0.68
CCDC47-202ENST00000403162 RGL4Q8IZJ4 473 aa19.32■□□□□ 0.68
CCDC47-202ENST00000403162 NDNFQ8TB73 568 aa19.32■□□□□ 0.68
CCDC47-202ENST00000403162 USP7Q93009 1102 aa19.32■□□□□ 0.68
Retrieved 100 of 20,778 RNA–protein pairs in 25.6 ms