RNA–Protein interactions for RNA: ENST00000400301.5

USP48-204, Transcript of ubiquitin specific peptidase 48, humanhuman

TSL 1 (best) BASIC

Gene USP48, Length 4,309 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP48-204ENST00000400301 OXTRP30559 389 aa18.08■□□□□ 0.49
USP48-204ENST00000400301 CDH12P55289 794 aa18.08■□□□□ 0.49
USP48-204ENST00000400301 DSC1Q08554 894 aa18.08■□□□□ 0.49
USP48-204ENST00000400301 Q6ZVL8 140 aa18.08■□□□□ 0.49
USP48-204ENST00000400301 TEX26Q8N6G2 289 aa18.08■□□□□ 0.49
USP48-204ENST00000400301 SCAMP4Q969E2 229 aa18.08■□□□□ 0.49
USP48-204ENST00000400301 ISOC1Q96CN7 298 aa18.08■□□□□ 0.49
USP48-204ENST00000400301 SEZ6LQ9BYH1 1024 aa18.08■□□□□ 0.49
USP48-204ENST00000400301 AMBNQ9NP70 447 aa18.08■□□□□ 0.49
USP48-204ENST00000400301 PNMA8CA0A1B0GUJ8 204 aa18.08■□□□□ 0.48
USP48-204ENST00000400301 MYL12BO14950 172 aa18.08■□□□□ 0.48
USP48-204ENST00000400301 ACRV1P26436 265 aa18.08■□□□□ 0.48
USP48-204ENST00000400301 HOXD9P28356 352 aaPredicted RBP18.08■□□□□ 0.48
USP48-204ENST00000400301 MED22Q15528 200 aa18.08■□□□□ 0.48
USP48-204ENST00000400301 TCEA2Q15560 299 aa18.08■□□□□ 0.48
USP48-204ENST00000400301 EGFLAMQ63HQ2 1017 aa18.08■□□□□ 0.48
USP48-204ENST00000400301 TAS1R1Q7RTX1 841 aa18.08■□□□□ 0.48
USP48-204ENST00000400301 RBM23Q86U06 439 aaKnown RBP18.08■□□□□ 0.48
USP48-204ENST00000400301 ZNF614Q8N883 585 aa18.08■□□□□ 0.48
USP48-204ENST00000400301 CYB5D2Q8WUJ1 264 aa18.08■□□□□ 0.48
USP48-204ENST00000400301 TMIGD2Q96BF3 282 aa18.08■□□□□ 0.48
USP48-204ENST00000400301 PYURFQ96I23 114 aa18.08■□□□□ 0.48
USP48-204ENST00000400301 ZNF597Q96LX8 424 aa18.08■□□□□ 0.48
USP48-204ENST00000400301 GPR45Q9Y5Y3 372 aa18.08■□□□□ 0.48
USP48-204ENST00000400301 ATAD5Q96QE3 1844 aa18.08■□□□□ 0.48
USP48-204ENST00000400301 LOC100130705A0A1B0GUX0 176 aa18.08■□□□□ 0.48
USP48-204ENST00000400301 ACRP10323 421 aa18.08■□□□□ 0.48
USP48-204ENST00000400301 PDPRQ8NCN5 879 aa18.08■□□□□ 0.48
USP48-204ENST00000400301 MAELQ96JY0 434 aaKnown RBP18.08■□□□□ 0.48
USP48-204ENST00000400301 TRPS1Q9UHF7 1281 aa18.08■□□□□ 0.48
USP48-204ENST00000400301 SAP18O00422 153 aaKnown RBP18.07■□□□□ 0.48
USP48-204ENST00000400301 CCNDBP1O95273 360 aa18.07■□□□□ 0.48
USP48-204ENST00000400301 SLC35G4P0C7Q5 338 aa18.07■□□□□ 0.48
USP48-204ENST00000400301 CDH3P22223 829 aa18.07■□□□□ 0.48
USP48-204ENST00000400301 KCNAB2Q13303 367 aa18.07■□□□□ 0.48
USP48-204ENST00000400301 ATAD3BQ5T9A4 648 aa18.07■□□□□ 0.48
USP48-204ENST00000400301 DEF8Q6ZN54 512 aa18.07■□□□□ 0.48
USP48-204ENST00000400301 WDR12Q9GZL7 423 aaKnown RBP18.07■□□□□ 0.48
USP48-204ENST00000400301 DEC1Q9P2X7 70 aa18.07■□□□□ 0.48
USP48-204ENST00000400301 ENTPD4Q9Y227 616 aa18.07■□□□□ 0.48
USP48-204ENST00000400301 ACOT8O14734 319 aa18.07■□□□□ 0.48
USP48-204ENST00000400301 PCDH7O60245 1069 aa18.07■□□□□ 0.48
USP48-204ENST00000400301 NTSP30990 170 aa18.07■□□□□ 0.48
USP48-204ENST00000400301 MAPK9P45984 424 aa18.07■□□□□ 0.48
USP48-204ENST00000400301 CAP1Q01518 475 aa18.07■□□□□ 0.48
USP48-204ENST00000400301 RCAN2Q14206 197 aa18.07■□□□□ 0.48
USP48-204ENST00000400301 TYSND1Q2T9J0 566 aa18.07■□□□□ 0.48
USP48-204ENST00000400301 ZNF773Q6PK81 442 aa18.07■□□□□ 0.48
USP48-204ENST00000400301 ADGRG5Q8IZF4 528 aa18.07■□□□□ 0.48
USP48-204ENST00000400301 CCDC177Q9NQR7 707 aaPredicted RBP18.07■□□□□ 0.48
USP48-204ENST00000400301 BACE2Q9Y5Z0 518 aa18.07■□□□□ 0.48
USP48-204ENST00000400301 ADAMDEC1O15204 470 aa18.07■□□□□ 0.48
USP48-204ENST00000400301 ADAM12O43184 909 aa18.07■□□□□ 0.48
USP48-204ENST00000400301 ADH1CP00326 375 aa18.07■□□□□ 0.48
USP48-204ENST00000400301 POU2F1P14859 743 aa18.07■□□□□ 0.48
USP48-204ENST00000400301 TGM3Q08188 693 aa18.07■□□□□ 0.48
USP48-204ENST00000400301 ARMC4Q5T2S8 1044 aa18.07■□□□□ 0.48
USP48-204ENST00000400301 PTCHD4Q6ZW05 846 aa18.07■□□□□ 0.48
USP48-204ENST00000400301 ZNF554Q86TJ5 538 aa18.07■□□□□ 0.48
USP48-204ENST00000400301 KBTBD8Q8NFY9 601 aa18.07■□□□□ 0.48
USP48-204ENST00000400301 STON2Q8WXE9 905 aa18.07■□□□□ 0.48
USP48-204ENST00000400301 ANKRD60Q9BZ19 345 aa18.07■□□□□ 0.48
USP48-204ENST00000400301 PREBQ9HCU5 417 aa18.07■□□□□ 0.48
USP48-204ENST00000400301 ZNF99A8MXY4 864 aaPredicted RBP18.07■□□□□ 0.48
USP48-204ENST00000400301 IGLV3-25P01717 112 aa18.07■□□□□ 0.48
USP48-204ENST00000400301 TFAP2AP05549 437 aa18.07■□□□□ 0.48
USP48-204ENST00000400301 CHRM1P11229 460 aaPredicted RBP18.07■□□□□ 0.48
USP48-204ENST00000400301 BPIP17213 487 aa18.07■□□□□ 0.48
USP48-204ENST00000400301 ENTPD1P49961 510 aa18.07■□□□□ 0.48
USP48-204ENST00000400301 DPY19L3Q6ZPD9 716 aa18.07■□□□□ 0.48
USP48-204ENST00000400301 TSPAN33Q86UF1 283 aa18.07■□□□□ 0.48
USP48-204ENST00000400301 HSPBAP1Q96EW2 488 aa18.07■□□□□ 0.48
USP48-204ENST00000400301 PRNPP04156 253 aa18.06■□□□□ 0.48
USP48-204ENST00000400301 PTPN2P17706 415 aa18.06■□□□□ 0.48
USP48-204ENST00000400301 DPP6P42658 865 aa18.06■□□□□ 0.48
USP48-204ENST00000400301 SKIV2LQ15477 1246 aaKnown RBP18.06■□□□□ 0.48
USP48-204ENST00000400301 TEAD4Q15561 434 aa18.06■□□□□ 0.48
USP48-204ENST00000400301 DUOXA1Q1HG43 343 aa18.06■□□□□ 0.48
USP48-204ENST00000400301 TMEM207Q6UWW9 146 aa18.06■□□□□ 0.48
USP48-204ENST00000400301 THOC6Q86W42 341 aaKnown RBP18.06■□□□□ 0.48
USP48-204ENST00000400301 POC5Q8NA72 575 aa18.06■□□□□ 0.48
USP48-204ENST00000400301 PRRG3Q9BZD7 231 aa18.06■□□□□ 0.48
USP48-204ENST00000400301 OR2AG1Q9H205 316 aa18.06■□□□□ 0.48
USP48-204ENST00000400301 FZD4Q9ULV1 537 aa18.06■□□□□ 0.48
USP48-204ENST00000400301 TMED5Q9Y3A6 229 aa18.06■□□□□ 0.48
USP48-204ENST00000400301 C7orf72A4D263 438 aa18.06■□□□□ 0.48
USP48-204ENST00000400301 EFCAB10A6NFE3 127 aa18.06■□□□□ 0.48
USP48-204ENST00000400301 MYL12AP19105 171 aa18.06■□□□□ 0.48
USP48-204ENST00000400301 IST1P53990 364 aa18.06■□□□□ 0.48
USP48-204ENST00000400301 INAQ16352 499 aa18.06■□□□□ 0.48
USP48-204ENST00000400301 ARMCX4Q5H9R4 360 aa18.06■□□□□ 0.48
USP48-204ENST00000400301 BRAT1Q6PJG6 821 aa18.06■□□□□ 0.48
USP48-204ENST00000400301 CMTM7Q96FZ5 175 aa18.06■□□□□ 0.48
USP48-204ENST00000400301 CLDN25C9JDP6 229 aa18.06■□□□□ 0.48
USP48-204ENST00000400301 EFCAB14O75071 495 aa18.06■□□□□ 0.48
USP48-204ENST00000400301 BMP10O95393 424 aa18.06■□□□□ 0.48
USP48-204ENST00000400301 PDYNP01213 254 aa18.06■□□□□ 0.48
USP48-204ENST00000400301 OPN1SWP03999 348 aa18.06■□□□□ 0.48
USP48-204ENST00000400301 C7P10643 843 aa18.06■□□□□ 0.48
USP48-204ENST00000400301 MGAT3Q09327 533 aa18.06■□□□□ 0.48
Retrieved 100 of 20,778 RNA–protein pairs in 22.4 ms