RNA–Protein interactions for RNA: ENST00000398043.2

APTR-201, Transcript of Alu-mediated CDKN1A/p21 transcriptional regulator, humanhuman

TSL 1 (best)

Gene APTR, Length 528 nt, Biotype lincRNA, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APTR-201ENST00000398043 KLK4Q9Y5K2 254 aa16.09■□□□□ 0.17
APTR-201ENST00000398043 CPNE3O75131 537 aaKnown RBP16.08■□□□□ 0.16
APTR-201ENST00000398043 VPS26AO75436 327 aa16.08■□□□□ 0.16
APTR-201ENST00000398043 FKBP9O95302 570 aa16.08■□□□□ 0.16
APTR-201ENST00000398043 ITGB2P05107 769 aa16.08■□□□□ 0.16
APTR-201ENST00000398043 CTSBP07858 339 aa16.08■□□□□ 0.16
APTR-201ENST00000398043 MAGP20916 626 aa16.08■□□□□ 0.16
APTR-201ENST00000398043 GCGRP47871 477 aa16.08■□□□□ 0.16
APTR-201ENST00000398043 TRADDQ15628 312 aa16.08■□□□□ 0.16
APTR-201ENST00000398043 FCRL6Q6DN72 434 aa16.08■□□□□ 0.16
APTR-201ENST00000398043 TAX1BP1Q86VP1 789 aa16.08■□□□□ 0.16
APTR-201ENST00000398043 TMEM126BQ8IUX1 230 aa16.08■□□□□ 0.16
APTR-201ENST00000398043 CPNE9Q8IYJ1 553 aa16.08■□□□□ 0.16
APTR-201ENST00000398043 ZSCAN1Q8NBB4 408 aa16.08■□□□□ 0.16
APTR-201ENST00000398043 OR9A1PQ8NGU1 263 aa16.08■□□□□ 0.16
APTR-201ENST00000398043 GABPB2Q8TAK5 448 aaPredicted RBP16.08■□□□□ 0.16
APTR-201ENST00000398043 CT55Q8WUE5 264 aa16.08■□□□□ 0.16
APTR-201ENST00000398043 DLG3Q92796 817 aa16.08■□□□□ 0.16
APTR-201ENST00000398043 KIAA1143Q96AT1 154 aaPredicted RBP16.08■□□□□ 0.16
APTR-201ENST00000398043 PKP4Q99569 1192 aa16.08■□□□□ 0.16
APTR-201ENST00000398043 EFHD1Q9BUP0 239 aa16.08■□□□□ 0.16
APTR-201ENST00000398043 KLHL20Q9Y2M5 609 aa16.08■□□□□ 0.16
APTR-201ENST00000398043 PSAT1Q9Y617 370 aa16.08■□□□□ 0.16
APTR-201ENST00000398043 MRPS18BQ9Y676 258 aaKnown RBP16.08■□□□□ 0.16
APTR-201ENST00000398043 TLN1Q9Y490 2541 aaKnown RBP16.08■□□□□ 0.16
APTR-201ENST00000398043 NUP210LQ5VU65 1888 aa16.08■□□□□ 0.16
APTR-201ENST00000398043 SMG1Q96Q15 3661 aaKnown RBP16.07■□□□□ 0.16
APTR-201ENST00000398043 EIF3HO15372 352 aaKnown RBP eCLIP16.07■□□□□ 0.16
APTR-201ENST00000398043 NKX2-8O15522 239 aa16.07■□□□□ 0.16
APTR-201ENST00000398043 TSPAN12O95859 305 aa16.07■□□□□ 0.16
APTR-201ENST00000398043 C1QAP02745 245 aa16.07■□□□□ 0.16
APTR-201ENST00000398043 PSMB5P28074 263 aa16.07■□□□□ 0.16
APTR-201ENST00000398043 OAS2P29728 719 aaKnown RBP16.07■□□□□ 0.16
APTR-201ENST00000398043 DLSTP36957 453 aa16.07■□□□□ 0.16
APTR-201ENST00000398043 GRIA3P42263 894 aa16.07■□□□□ 0.16
APTR-201ENST00000398043 SKIV2L2P42285 1042 aaKnown RBP16.07■□□□□ 0.16
APTR-201ENST00000398043 ITGA1P56199 1179 aa16.07■□□□□ 0.16
APTR-201ENST00000398043 MGAT5Q09328 741 aa16.07■□□□□ 0.16
APTR-201ENST00000398043 ARHGAP19Q14CB8 494 aa16.07■□□□□ 0.16
APTR-201ENST00000398043 DEFB110Q30KQ9 67 aa16.07■□□□□ 0.16
APTR-201ENST00000398043 ZNF385CQ66K41 422 aaPredicted RBP16.07■□□□□ 0.16
APTR-201ENST00000398043 LCN10Q6JVE6 187 aa16.07■□□□□ 0.16
APTR-201ENST00000398043 FAM199XQ6PEV8 388 aaPredicted RBP16.07■□□□□ 0.16
APTR-201ENST00000398043 ZDHHC24Q6UX98 284 aa16.07■□□□□ 0.16
APTR-201ENST00000398043 PIWIL4Q7Z3Z4 852 aaKnown RBP16.07■□□□□ 0.16
APTR-201ENST00000398043 LRRC56Q8IYG6 542 aaPredicted RBP16.07■□□□□ 0.16
APTR-201ENST00000398043 DSELQ8IZU8 1212 aa16.07■□□□□ 0.16
APTR-201ENST00000398043 SEC14L1Q92503 715 aa16.07■□□□□ 0.16
APTR-201ENST00000398043 RUFY1Q96T51 708 aa16.07■□□□□ 0.16
APTR-201ENST00000398043 FANCEQ9HB96 536 aa16.07■□□□□ 0.16
APTR-201ENST00000398043 SMYD2Q9NRG4 433 aa16.07■□□□□ 0.16
APTR-201ENST00000398043 TAS2R13Q9NYV9 303 aa16.07■□□□□ 0.16
APTR-201ENST00000398043 SERTAD3Q9UJW9 196 aa16.07■□□□□ 0.16
APTR-201ENST00000398043 CORO1CQ9ULV4 474 aaPredicted RBP16.07■□□□□ 0.16
APTR-201ENST00000398043 CFAP46Q8IYW2 2715 aa16.06■□□□□ 0.16
APTR-201ENST00000398043 ZNF891A8MT65 544 aaPredicted RBP16.06■□□□□ 0.16
APTR-201ENST00000398043 CATP04040 527 aaKnown RBP16.06■□□□□ 0.16
APTR-201ENST00000398043 CAPN1P07384 714 aa16.06■□□□□ 0.16
APTR-201ENST00000398043 CCNYL3P0C7X3 344 aa16.06■□□□□ 0.16
APTR-201ENST00000398043 FDXRP22570 491 aa16.06■□□□□ 0.16
APTR-201ENST00000398043 MCM3P25205 808 aa16.06■□□□□ 0.16
APTR-201ENST00000398043 PGGT1BP53609 377 aa16.06■□□□□ 0.16
APTR-201ENST00000398043 YBX1P67809 324 aaKnown RBP16.06■□□□□ 0.16
APTR-201ENST00000398043 CALCOCO2Q13137 446 aa16.06■□□□□ 0.16
APTR-201ENST00000398043 TBR1Q16650 682 aa16.06■□□□□ 0.16
APTR-201ENST00000398043 UGT3A1Q6NUS8 523 aa16.06■□□□□ 0.16
APTR-201ENST00000398043 FIGLAQ6QHK4 219 aa16.06■□□□□ 0.16
APTR-201ENST00000398043 PAQR3Q6TCH7 311 aa16.06■□□□□ 0.16
APTR-201ENST00000398043 ZC3HC1Q86WB0 502 aaKnown RBP16.06■□□□□ 0.16
APTR-201ENST00000398043 ZBED8Q8IZ13 594 aa16.06■□□□□ 0.16
APTR-201ENST00000398043 OR2L3Q8NG85 312 aa16.06■□□□□ 0.16
APTR-201ENST00000398043 EEF1AKMT1Q8WVE0 214 aa16.06■□□□□ 0.16
APTR-201ENST00000398043 STARD8Q92502 1023 aa16.06■□□□□ 0.16
APTR-201ENST00000398043 SLC39A7Q92504 469 aa16.06■□□□□ 0.16
APTR-201ENST00000398043 ZNF285Q96NJ3 590 aa16.06■□□□□ 0.16
APTR-201ENST00000398043 PHACTR1Q9C0D0 580 aa16.06■□□□□ 0.16
APTR-201ENST00000398043 SPRTNQ9H040 489 aaPredicted RBP16.06■□□□□ 0.16
APTR-201ENST00000398043 PPANQ9NQ55 473 aaKnown RBP16.06■□□□□ 0.16
APTR-201ENST00000398043 FAM114A2Q9NRY5 505 aa16.06■□□□□ 0.16
APTR-201ENST00000398043 PCMTD2Q9NV79 361 aa16.06■□□□□ 0.16
APTR-201ENST00000398043 PLCL2Q9UPR0 1127 aa16.06■□□□□ 0.16
APTR-201ENST00000398043 UTP11Q9Y3A2 253 aaKnown RBP16.06■□□□□ 0.16
APTR-201ENST00000398043 BOD1L1Q8NFC6 3051 aa16.05■□□□□ 0.16
APTR-201ENST00000398043 TARM1B6A8C7 271 aa16.05■□□□□ 0.16
APTR-201ENST00000398043 C21orf140B9A014 251 aa16.05■□□□□ 0.16
APTR-201ENST00000398043 MEN1O00255 615 aa16.05■□□□□ 0.16
APTR-201ENST00000398043 MAP3K7O43318 606 aa16.05■□□□□ 0.16
APTR-201ENST00000398043 ZNF749O43361 778 aa16.05■□□□□ 0.16
APTR-201ENST00000398043 C1QL1O75973 258 aa16.05■□□□□ 0.16
APTR-201ENST00000398043 URI1O94763 535 aaPredicted RBP16.05■□□□□ 0.16
APTR-201ENST00000398043 SLC16A8O95907 504 aa16.05■□□□□ 0.16
APTR-201ENST00000398043 RECKO95980 971 aa16.05■□□□□ 0.16
APTR-201ENST00000398043 TCN2P20062 427 aa16.05■□□□□ 0.16
APTR-201ENST00000398043 CKAP4Q07065 602 aaKnown RBP16.05■□□□□ 0.16
APTR-201ENST00000398043 CDC20Q12834 499 aa16.05■□□□□ 0.16
APTR-201ENST00000398043 DNASE1L3Q13609 305 aa16.05■□□□□ 0.16
APTR-201ENST00000398043 SF1Q15637 639 aaKnown RBP16.05■□□□□ 0.16
APTR-201ENST00000398043 WHAMMP3Q1A5X7 153 aa16.05■□□□□ 0.16
APTR-201ENST00000398043 HECTD2Q5U5R9 776 aa16.05■□□□□ 0.16
APTR-201ENST00000398043 CYS1Q717R9 158 aa16.05■□□□□ 0.16
Retrieved 100 of 20,778 RNA–protein pairs in 28.7 ms