RNA–Protein interactions for RNA: ENST00000398020.6

TMEM55B-202, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene TMEM55B, Length 1,696 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM55B-202ENST00000398020 EIF3IQ13347 325 aaKnown RBP24.5■■□□□ 1.51
TMEM55B-202ENST00000398020 KCNAB1Q14722 419 aa24.5■■□□□ 1.51
TMEM55B-202ENST00000398020 TAF1BQ53T94 588 aaPredicted RBP24.5■■□□□ 1.51
TMEM55B-202ENST00000398020 CENPLQ8N0S6 344 aaPredicted RBP24.5■■□□□ 1.51
TMEM55B-202ENST00000398020 HMGCLL1Q8TB92 370 aa24.5■■□□□ 1.51
TMEM55B-202ENST00000398020 EPS8L3Q8TE67 593 aaKnown RBP24.5■■□□□ 1.51
TMEM55B-202ENST00000398020 KLHL6Q8WZ60 621 aa24.5■■□□□ 1.51
TMEM55B-202ENST00000398020 ANKRD7Q92527 254 aa24.5■■□□□ 1.51
TMEM55B-202ENST00000398020 PTERQ96BW5 349 aa24.5■■□□□ 1.51
TMEM55B-202ENST00000398020 NXNL1Q96CM4 212 aa24.5■■□□□ 1.51
TMEM55B-202ENST00000398020 PRR11Q96HE9 360 aaPredicted RBP24.5■■□□□ 1.51
TMEM55B-202ENST00000398020 ACAT2Q9BWD1 397 aa24.5■■□□□ 1.51
TMEM55B-202ENST00000398020 TRIM54Q9BYV2 358 aa24.5■■□□□ 1.51
TMEM55B-202ENST00000398020 PITPNM3Q9BZ71 974 aa24.5■■□□□ 1.51
TMEM55B-202ENST00000398020 C1GALT1Q9NS00 363 aa24.5■■□□□ 1.51
TMEM55B-202ENST00000398020 IGSF5Q9NSI5 407 aa24.5■■□□□ 1.51
TMEM55B-202ENST00000398020 KLHL20Q9Y2M5 609 aa24.5■■□□□ 1.51
TMEM55B-202ENST00000398020 SNRNP200O75643 2136 aaKnown RBP24.49■■□□□ 1.51
TMEM55B-202ENST00000398020 PRAMEF10O60809 474 aa24.49■■□□□ 1.51
TMEM55B-202ENST00000398020 FGF3P11487 239 aaPredicted RBP24.49■■□□□ 1.51
TMEM55B-202ENST00000398020 MAPK10P53779 464 aa24.49■■□□□ 1.51
TMEM55B-202ENST00000398020 ARHGAP19Q14CB8 494 aa24.49■■□□□ 1.51
TMEM55B-202ENST00000398020 SF1Q15637 639 aaKnown RBP24.49■■□□□ 1.51
TMEM55B-202ENST00000398020 LGSNQ5TDP6 509 aa24.49■■□□□ 1.51
TMEM55B-202ENST00000398020 FRA10AC1Q70Z53 315 aa24.49■■□□□ 1.51
TMEM55B-202ENST00000398020 ATG10Q9H0Y0 220 aa24.49■■□□□ 1.51
TMEM55B-202ENST00000398020 SOHLH2Q9NX45 425 aa24.49■■□□□ 1.51
TMEM55B-202ENST00000398020 SEMA5BQ9P283 1151 aa24.49■■□□□ 1.51
TMEM55B-202ENST00000398020 ADAMTS20P59510 1910 aa24.48■■□□□ 1.51
TMEM55B-202ENST00000398020 A0A087X1B8 175 aa24.48■■□□□ 1.51
TMEM55B-202ENST00000398020 E7ENX8 843 aa24.48■■□□□ 1.51
TMEM55B-202ENST00000398020 PRICKLE3O43900 615 aaPredicted RBP24.48■■□□□ 1.51
TMEM55B-202ENST00000398020 ENO2P09104 434 aaPredicted RBP24.48■■□□□ 1.51
TMEM55B-202ENST00000398020 LTA4HP09960 611 aaKnown RBP24.48■■□□□ 1.51
TMEM55B-202ENST00000398020 NELFEP18615 380 aaKnown RBP24.48■■□□□ 1.51
TMEM55B-202ENST00000398020 ARL4DP49703 201 aa24.48■■□□□ 1.51
TMEM55B-202ENST00000398020 ATP6V0D1P61421 351 aa24.48■■□□□ 1.51
TMEM55B-202ENST00000398020 YBX1P67809 324 aaKnown RBP24.48■■□□□ 1.51
TMEM55B-202ENST00000398020 TAP2Q03519 686 aa24.48■■□□□ 1.51
TMEM55B-202ENST00000398020 OR4D1Q15615 310 aa24.48■■□□□ 1.51
TMEM55B-202ENST00000398020 ADAMTSL2Q86TH1 951 aa24.48■■□□□ 1.51
TMEM55B-202ENST00000398020 SMPDL3AQ92484 453 aa24.48■■□□□ 1.51
TMEM55B-202ENST00000398020 ISL2Q96A47 359 aa24.48■■□□□ 1.51
TMEM55B-202ENST00000398020 SLC22A18Q96BI1 424 aa24.48■■□□□ 1.51
TMEM55B-202ENST00000398020 NXPE2Q96DL1 559 aa24.48■■□□□ 1.51
TMEM55B-202ENST00000398020 MIPEPQ99797 713 aa24.48■■□□□ 1.51
TMEM55B-202ENST00000398020 NOVA2Q9UNW9 492 aaKnown RBP24.48■■□□□ 1.51
TMEM55B-202ENST00000398020 TNFSF15O95150 251 aa24.47■■□□□ 1.51
TMEM55B-202ENST00000398020 ZBTB11O95625 1053 aaPredicted RBP24.47■■□□□ 1.51
TMEM55B-202ENST00000398020 TFEBP19484 476 aa24.47■■□□□ 1.51
TMEM55B-202ENST00000398020 OAS2P29728 719 aaKnown RBP24.47■■□□□ 1.51
TMEM55B-202ENST00000398020 HSD17B2P37059 387 aa24.47■■□□□ 1.51
TMEM55B-202ENST00000398020 MAGEA12P43365 314 aa24.47■■□□□ 1.51
TMEM55B-202ENST00000398020 GLRBP48167 497 aa24.47■■□□□ 1.51
TMEM55B-202ENST00000398020 RTP5Q14D33 572 aa24.47■■□□□ 1.51
TMEM55B-202ENST00000398020 AGTRAPQ6RW13 159 aa24.47■■□□□ 1.51
TMEM55B-202ENST00000398020 GATA6Q92908 595 aa24.47■■□□□ 1.51
TMEM55B-202ENST00000398020 PMEPA1Q969W9 287 aa24.47■■□□□ 1.51
TMEM55B-202ENST00000398020 MED8Q96G25 268 aa24.47■■□□□ 1.51
TMEM55B-202ENST00000398020 SLC41A2Q96JW4 573 aa24.47■■□□□ 1.51
TMEM55B-202ENST00000398020 TRAPPC9Q96Q05 1148 aa24.47■■□□□ 1.51
TMEM55B-202ENST00000398020 ALG9Q9H6U8 611 aa24.47■■□□□ 1.51
TMEM55B-202ENST00000398020 CAMSAP3Q9P1Y5 1249 aaPredicted RBP24.47■■□□□ 1.51
TMEM55B-202ENST00000398020 OARD1Q9Y530 152 aa24.47■■□□□ 1.51
TMEM55B-202ENST00000398020 A0A0J9YY10 115 aa24.46■■□□□ 1.51
TMEM55B-202ENST00000398020 NCF1BA6NI72 391 aaPredicted RBP24.46■■□□□ 1.51
TMEM55B-202ENST00000398020 NCF1CA8MVU1 366 aaPredicted RBP24.46■■□□□ 1.51
TMEM55B-202ENST00000398020 FOXO6A8MYZ6 492 aa24.46■■□□□ 1.51
TMEM55B-202ENST00000398020 BRINP1O60477 761 aa24.46■■□□□ 1.51
TMEM55B-202ENST00000398020 NCF1P14598 390 aaPredicted RBP24.46■■□□□ 1.51
TMEM55B-202ENST00000398020 RPA3P35244 121 aaPredicted RBP24.46■■□□□ 1.51
TMEM55B-202ENST00000398020 AP1S2P56377 157 aa24.46■■□□□ 1.51
TMEM55B-202ENST00000398020 HSD11B2P80365 405 aa24.46■■□□□ 1.51
TMEM55B-202ENST00000398020 CYP4F3Q08477 520 aa24.46■■□□□ 1.51
TMEM55B-202ENST00000398020 SLC5A12Q1EHB4 618 aa24.46■■□□□ 1.51
TMEM55B-202ENST00000398020 ZXDCQ2QGD7 858 aaPredicted RBP24.46■■□□□ 1.51
TMEM55B-202ENST00000398020 LRRC56Q8IYG6 542 aaPredicted RBP24.46■■□□□ 1.51
TMEM55B-202ENST00000398020 BMPERQ8N8U9 685 aa24.46■■□□□ 1.51
TMEM55B-202ENST00000398020 OR2A1Q8NGT9 310 aa24.46■■□□□ 1.51
TMEM55B-202ENST00000398020 MDM1Q8TC05 714 aa24.46■■□□□ 1.51
TMEM55B-202ENST00000398020 ALKBH8Q96BT7 664 aaKnown RBP24.46■■□□□ 1.51
TMEM55B-202ENST00000398020 NMRAL1Q9HBL8 299 aa24.46■■□□□ 1.51
TMEM55B-202ENST00000398020 PCDHGA8Q9Y5G5 932 aa24.46■■□□□ 1.51
TMEM55B-202ENST00000398020 IQANK1A0A1B0GTG1 560 aa24.46■■□□□ 1.51
TMEM55B-202ENST00000398020 ZNF839A8K0R7 811 aa24.46■■□□□ 1.51
TMEM55B-202ENST00000398020 RFPL1O75677 317 aa24.46■■□□□ 1.51
TMEM55B-202ENST00000398020 NUDT17P0C025 328 aa24.46■■□□□ 1.51
TMEM55B-202ENST00000398020 EBLN1P0CF75 366 aa24.46■■□□□ 1.51
TMEM55B-202ENST00000398020 MAGP20916 626 aa24.46■■□□□ 1.51
TMEM55B-202ENST00000398020 SLC26A3P40879 764 aa24.46■■□□□ 1.51
TMEM55B-202ENST00000398020 TBPL1P62380 186 aa24.46■■□□□ 1.51
TMEM55B-202ENST00000398020 FOXM1Q08050 763 aa24.46■■□□□ 1.51
TMEM55B-202ENST00000398020 KIAA1614Q5VZ46 1190 aa24.46■■□□□ 1.51
TMEM55B-202ENST00000398020 ISCA2Q86U28 154 aa24.46■■□□□ 1.51
TMEM55B-202ENST00000398020 PLD6Q8N2A8 252 aaKnown RBP24.46■■□□□ 1.51
TMEM55B-202ENST00000398020 MREGQ8N565 214 aa24.46■■□□□ 1.51
TMEM55B-202ENST00000398020 EXT2Q93063 718 aa24.46■■□□□ 1.51
TMEM55B-202ENST00000398020 KIAA1191Q96A73 305 aa24.46■■□□□ 1.51
TMEM55B-202ENST00000398020 MTBPQ96DY7 904 aa24.46■■□□□ 1.51
TMEM55B-202ENST00000398020 CTRCQ99895 268 aa24.46■■□□□ 1.51
Retrieved 100 of 20,778 RNA–protein pairs in 21.7 ms