RNA–Protein interactions for RNA: ENST00000394082.8

SNRPA1-202, Transcript of small nuclear ribonucleoprotein polypeptide A', humanhuman

TSL 1 (best)

Gene SNRPA1, Length 556 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRPA1-202ENST00000394082 FASTKD1Q53R41 847 aaKnown RBP16.78■□□□□ 0.28
SNRPA1-202ENST00000394082 PRAMEF13Q5VWM6 474 aa16.78■□□□□ 0.28
SNRPA1-202ENST00000394082 HIST2H2BCQ6DN03 193 aa16.78■□□□□ 0.28
SNRPA1-202ENST00000394082 KIAA1328Q86T90 577 aa16.78■□□□□ 0.28
SNRPA1-202ENST00000394082 VRK3Q8IV63 474 aa16.78■□□□□ 0.28
SNRPA1-202ENST00000394082 ACRBPQ8NEB7 543 aa16.78■□□□□ 0.28
SNRPA1-202ENST00000394082 HMGCLL1Q8TB92 370 aa16.78■□□□□ 0.28
SNRPA1-202ENST00000394082 INPP5DQ92835 1189 aa16.78■□□□□ 0.28
SNRPA1-202ENST00000394082 SPSB2Q99619 263 aa16.78■□□□□ 0.28
SNRPA1-202ENST00000394082 WDR77Q9BQA1 342 aaPredicted RBP16.78■□□□□ 0.28
SNRPA1-202ENST00000394082 AGPAT4Q9NRZ5 378 aa16.78■□□□□ 0.28
SNRPA1-202ENST00000394082 SLC2A6Q9UGQ3 507 aa16.78■□□□□ 0.28
SNRPA1-202ENST00000394082 TCAF1Q9Y4C2 921 aa16.78■□□□□ 0.28
SNRPA1-202ENST00000394082 POLEQ07864 2286 aa16.77■□□□□ 0.28
SNRPA1-202ENST00000394082 TCRBV7S2A1N4TA0A589 114 aa16.77■□□□□ 0.28
SNRPA1-202ENST00000394082 PRMT5O14744 637 aaPredicted RBP16.77■□□□□ 0.28
SNRPA1-202ENST00000394082 KPNA5O15131 536 aa16.77■□□□□ 0.28
SNRPA1-202ENST00000394082 LIASO43766 372 aa16.77■□□□□ 0.28
SNRPA1-202ENST00000394082 SLC9A5Q14940 896 aa16.77■□□□□ 0.28
SNRPA1-202ENST00000394082 FCRL6Q6DN72 434 aa16.77■□□□□ 0.28
SNRPA1-202ENST00000394082 FIGLAQ6QHK4 219 aa16.77■□□□□ 0.28
SNRPA1-202ENST00000394082 PPP1R21Q6ZMI0 780 aa16.77■□□□□ 0.28
SNRPA1-202ENST00000394082 TTLL10Q6ZVT0 673 aa16.77■□□□□ 0.28
SNRPA1-202ENST00000394082 CUZD1Q86UP6 607 aa16.77■□□□□ 0.28
SNRPA1-202ENST00000394082 MPP5Q8N3R9 675 aa16.77■□□□□ 0.28
SNRPA1-202ENST00000394082 LMNTD1Q8N9Z9 388 aa16.77■□□□□ 0.28
SNRPA1-202ENST00000394082 ST6GALNAC3Q8NDV1 305 aa16.77■□□□□ 0.28
SNRPA1-202ENST00000394082 OR6P1Q8NGX9 317 aa16.77■□□□□ 0.28
SNRPA1-202ENST00000394082 RAD51AP1Q96B01 352 aa16.77■□□□□ 0.28
SNRPA1-202ENST00000394082 C5orf34Q96MH7 638 aa16.77■□□□□ 0.28
SNRPA1-202ENST00000394082 ZNF778Q96MU6 729 aa16.77■□□□□ 0.28
SNRPA1-202ENST00000394082 PANX3Q96QZ0 392 aa16.77■□□□□ 0.28
SNRPA1-202ENST00000394082 SEMA3GQ9NS98 782 aa16.77■□□□□ 0.28
SNRPA1-202ENST00000394082 CUTCQ9NTM9 273 aa16.77■□□□□ 0.28
SNRPA1-202ENST00000394082 ANAPC5Q9UJX4 755 aa16.77■□□□□ 0.28
SNRPA1-202ENST00000394082 FBXL4Q9UKA2 621 aa16.77■□□□□ 0.28
SNRPA1-202ENST00000394082 PACSIN2Q9UNF0 486 aaPredicted RBP16.77■□□□□ 0.28
SNRPA1-202ENST00000394082 MYO9AB2RTY4 2548 aa16.77■□□□□ 0.28
SNRPA1-202ENST00000394082 VSTM2BA6NLU5 285 aa16.76■□□□□ 0.27
SNRPA1-202ENST00000394082 E7EVH7 732 aa16.76■□□□□ 0.27
SNRPA1-202ENST00000394082 SOCS6O14544 535 aa16.76■□□□□ 0.27
SNRPA1-202ENST00000394082 ELOAQ14241 798 aaKnown RBP16.76■□□□□ 0.27
SNRPA1-202ENST00000394082 TMED2Q15363 201 aa16.76■□□□□ 0.27
SNRPA1-202ENST00000394082 SF1Q15637 639 aaKnown RBP16.76■□□□□ 0.27
SNRPA1-202ENST00000394082 AGAP7PQ5VUJ5 663 aa16.76■□□□□ 0.27
SNRPA1-202ENST00000394082 B3GNTL1Q67FW5 361 aaPredicted RBP16.76■□□□□ 0.27
SNRPA1-202ENST00000394082 TTC23LQ6PF05 361 aa16.76■□□□□ 0.27
SNRPA1-202ENST00000394082 KIRREL2Q6UWL6 708 aa16.76■□□□□ 0.27
SNRPA1-202ENST00000394082 COX15Q7KZN9 410 aa16.76■□□□□ 0.27
SNRPA1-202ENST00000394082 LRRC6Q86X45 466 aa16.76■□□□□ 0.27
SNRPA1-202ENST00000394082 RAB42Q8N4Z0 105 aa16.76■□□□□ 0.27
SNRPA1-202ENST00000394082 RNF10Q8N5U6 811 aaKnown RBP16.76■□□□□ 0.27
SNRPA1-202ENST00000394082 AGAP4Q96P64 663 aa16.76■□□□□ 0.27
SNRPA1-202ENST00000394082 BAG1Q99933 345 aaPredicted RBP16.76■□□□□ 0.27
SNRPA1-202ENST00000394082 ZBTB20Q9HC78 741 aaPredicted RBP16.76■□□□□ 0.27
SNRPA1-202ENST00000394082 SLC6A20Q9NP91 592 aa16.76■□□□□ 0.27
SNRPA1-202ENST00000394082 CAMSAP3Q9P1Y5 1249 aaPredicted RBP16.76■□□□□ 0.27
SNRPA1-202ENST00000394082 CDC23Q9UJX2 597 aa16.76■□□□□ 0.27
SNRPA1-202ENST00000394082 SLC39A10Q9ULF5 831 aa16.76■□□□□ 0.27
SNRPA1-202ENST00000394082 HS3ST3B1Q9Y662 390 aa16.76■□□□□ 0.27
SNRPA1-202ENST00000394082 AP3B1O00203 1094 aa16.75■□□□□ 0.27
SNRPA1-202ENST00000394082 CLDN1O95832 211 aa16.75■□□□□ 0.27
SNRPA1-202ENST00000394082 FTCDO95954 541 aa16.75■□□□□ 0.27
SNRPA1-202ENST00000394082 ITGA3P26006 1051 aa16.75■□□□□ 0.27
SNRPA1-202ENST00000394082 GRIA1P42261 906 aa16.75■□□□□ 0.27
SNRPA1-202ENST00000394082 TSFMP43897 325 aaKnown RBP16.75■□□□□ 0.27
SNRPA1-202ENST00000394082 CSE1LP55060 971 aaKnown RBP16.75■□□□□ 0.27
SNRPA1-202ENST00000394082 SEMA3AQ14563 771 aa16.75■□□□□ 0.27
SNRPA1-202ENST00000394082 NAA25Q14CX7 972 aa16.75■□□□□ 0.27
SNRPA1-202ENST00000394082 PCID2Q5JVF3 399 aa16.75■□□□□ 0.27
SNRPA1-202ENST00000394082 IRAK1BP1Q5VVH5 260 aa16.75■□□□□ 0.27
SNRPA1-202ENST00000394082 FAM20CQ8IXL6 584 aa16.75■□□□□ 0.27
SNRPA1-202ENST00000394082 TTC29Q8NA56 475 aaPredicted RBP16.75■□□□□ 0.27
SNRPA1-202ENST00000394082 ATG4AQ8WYN0 398 aa16.75■□□□□ 0.27
SNRPA1-202ENST00000394082 SELENOSQ9BQE4 189 aa16.75■□□□□ 0.27
SNRPA1-202ENST00000394082 LHPPQ9H008 270 aa16.75■□□□□ 0.27
SNRPA1-202ENST00000394082 P2RY12Q9H244 342 aa16.75■□□□□ 0.27
SNRPA1-202ENST00000394082 RAB6BQ9NRW1 208 aa16.75■□□□□ 0.27
SNRPA1-202ENST00000394082 CATSPERZQ9NTU4 200 aa16.75■□□□□ 0.27
SNRPA1-202ENST00000394082 PAK5Q9P286 719 aa16.75■□□□□ 0.27
SNRPA1-202ENST00000394082 KLHL20Q9Y2M5 609 aa16.75■□□□□ 0.27
SNRPA1-202ENST00000394082 A1L4Q6 167 aa16.74■□□□□ 0.27
SNRPA1-202ENST00000394082 IQCF5A8MTL0 148 aa16.74■□□□□ 0.27
SNRPA1-202ENST00000394082 APRTP07741 180 aa16.74■□□□□ 0.27
SNRPA1-202ENST00000394082 RPS3P23396 243 aaKnown RBP eCLIP16.74■□□□□ 0.27
SNRPA1-202ENST00000394082 CCNFP41002 786 aa16.74■□□□□ 0.27
SNRPA1-202ENST00000394082 GRIA3P42263 894 aa16.74■□□□□ 0.27
SNRPA1-202ENST00000394082 GLRBP48167 497 aa16.74■□□□□ 0.27
SNRPA1-202ENST00000394082 CARSP49589 748 aaKnown RBP16.74■□□□□ 0.27
SNRPA1-202ENST00000394082 EMP3P54852 163 aa16.74■□□□□ 0.27
SNRPA1-202ENST00000394082 FOXL2P58012 376 aa16.74■□□□□ 0.27
SNRPA1-202ENST00000394082 TUBB8Q3ZCM7 444 aa16.74■□□□□ 0.27
SNRPA1-202ENST00000394082 PRMT9Q6P2P2 845 aa16.74■□□□□ 0.27
SNRPA1-202ENST00000394082 TMEM139Q8IV31 216 aa16.74■□□□□ 0.27
SNRPA1-202ENST00000394082 TAB3Q8N5C8 712 aaPredicted RBP16.74■□□□□ 0.27
SNRPA1-202ENST00000394082 PPHLN1Q8NEY8 458 aaKnown RBP16.74■□□□□ 0.27
SNRPA1-202ENST00000394082 GSDMBQ8TAX9 411 aa16.74■□□□□ 0.27
SNRPA1-202ENST00000394082 LKAAEAR1Q8TD35 194 aa16.74■□□□□ 0.27
SNRPA1-202ENST00000394082 MAGEC3Q8TD91 643 aa16.74■□□□□ 0.27
SNRPA1-202ENST00000394082 EIF2B3Q9NR50 452 aaKnown RBP16.74■□□□□ 0.27
Retrieved 100 of 20,778 RNA–protein pairs in 27.4 ms