RNA–Protein interactions for RNA: ENST00000391813.5

SHANK1-203, Transcript of SH3 and multiple ankyrin repeat domains 1, humanhuman

TSL 1 (best) BASIC

Gene SHANK1, Length 4,785 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHANK1-203ENST00000391813 TSTQ16762 297 aaKnown RBP19.27■□□□□ 0.68
SHANK1-203ENST00000391813 PIGXQ8TBF5 258 aa19.27■□□□□ 0.68
SHANK1-203ENST00000391813 UTP4Q969X6 686 aaKnown RBP19.27■□□□□ 0.68
SHANK1-203ENST00000391813 MYO19Q96H55 970 aa19.27■□□□□ 0.68
SHANK1-203ENST00000391813 C11orf97A0A1B0GVM6 126 aaPredicted RBP19.27■□□□□ 0.67
SHANK1-203ENST00000391813 C1QTNF3-AMACRE9PGA6 284 aa19.27■□□□□ 0.67
SHANK1-203ENST00000391813 CREG1O75629 220 aa19.27■□□□□ 0.67
SHANK1-203ENST00000391813 BMP2P12643 396 aa19.27■□□□□ 0.67
SHANK1-203ENST00000391813 CSTF1Q05048 431 aaKnown RBP19.27■□□□□ 0.67
SHANK1-203ENST00000391813 CNKSR3Q6P9H4 555 aa19.27■□□□□ 0.67
SHANK1-203ENST00000391813 CAND1Q86VP6 1230 aaKnown RBP19.27■□□□□ 0.67
SHANK1-203ENST00000391813 C2orf15Q8WU43 125 aaKnown RBP19.27■□□□□ 0.67
SHANK1-203ENST00000391813 NRG4Q8WWG1 115 aa19.27■□□□□ 0.67
SHANK1-203ENST00000391813 COL26A1Q96A83 441 aa19.27■□□□□ 0.67
SHANK1-203ENST00000391813 MND1Q9BWT6 205 aa19.27■□□□□ 0.67
SHANK1-203ENST00000391813 SLC27A5Q9Y2P5 690 aa19.27■□□□□ 0.67
SHANK1-203ENST00000391813 MAP4K5Q9Y4K4 846 aa19.27■□□□□ 0.67
SHANK1-203ENST00000391813 RAI2Q9Y5P3 530 aa19.27■□□□□ 0.67
SHANK1-203ENST00000391813 GLYATL1P3A0A0U1RQE8 302 aa19.26■□□□□ 0.67
SHANK1-203ENST00000391813 ADH1CP00326 375 aa19.26■□□□□ 0.67
SHANK1-203ENST00000391813 GJA9P57773 515 aa19.26■□□□□ 0.67
SHANK1-203ENST00000391813 IDNKQ5T6J7 187 aa19.26■□□□□ 0.67
SHANK1-203ENST00000391813 ZDHHC6Q9H6R6 413 aa19.26■□□□□ 0.67
SHANK1-203ENST00000391813 RGS17Q9UGC6 210 aaPredicted RBP19.26■□□□□ 0.67
SHANK1-203ENST00000391813 MAB21L2Q9Y586 359 aa19.26■□□□□ 0.67
SHANK1-203ENST00000391813 LTBP4Q8N2S1 1624 aa19.26■□□□□ 0.67
SHANK1-203ENST00000391813 SDHDO14521 159 aa19.26■□□□□ 0.67
SHANK1-203ENST00000391813 SIX3O95343 332 aaPredicted RBP19.26■□□□□ 0.67
SHANK1-203ENST00000391813 IL7P13232 177 aa19.26■□□□□ 0.67
SHANK1-203ENST00000391813 DAOAP59103 153 aa19.26■□□□□ 0.67
SHANK1-203ENST00000391813 A0A1B0GVG6 124 aa19.26■□□□□ 0.67
SHANK1-203ENST00000391813 CLIC1O00299 241 aa19.26■□□□□ 0.67
SHANK1-203ENST00000391813 CCL22O00626 93 aa19.26■□□□□ 0.67
SHANK1-203ENST00000391813 KDM4BO94953 1096 aa19.26■□□□□ 0.67
SHANK1-203ENST00000391813 ELK4P28324 431 aa19.26■□□□□ 0.67
SHANK1-203ENST00000391813 SIX1Q15475 284 aaPredicted RBP19.26■□□□□ 0.67
SHANK1-203ENST00000391813 PIGGQ5H8A4 983 aa19.26■□□□□ 0.67
SHANK1-203ENST00000391813 LMO3Q8TAP4 145 aa19.26■□□□□ 0.67
SHANK1-203ENST00000391813 ZC3H10Q96K80 434 aaKnown RBP19.26■□□□□ 0.67
SHANK1-203ENST00000391813 ACBD6Q9BR61 282 aa19.26■□□□□ 0.67
SHANK1-203ENST00000391813 DUSP26Q9BV47 211 aa19.26■□□□□ 0.67
SHANK1-203ENST00000391813 SMOXQ9NWM0 555 aa19.26■□□□□ 0.67
SHANK1-203ENST00000391813 TAS2R9Q9NYW1 312 aa19.26■□□□□ 0.67
SHANK1-203ENST00000391813 MAGEB3O15480 346 aa19.25■□□□□ 0.67
SHANK1-203ENST00000391813 DNTTP04053 509 aa19.25■□□□□ 0.67
SHANK1-203ENST00000391813 MATN1P21941 496 aa19.25■□□□□ 0.67
SHANK1-203ENST00000391813 DEFA5Q01523 94 aa19.25■□□□□ 0.67
SHANK1-203ENST00000391813 IL10RBQ08334 325 aa19.25■□□□□ 0.67
SHANK1-203ENST00000391813 CHIT1Q13231 466 aa19.25■□□□□ 0.67
SHANK1-203ENST00000391813 RAB30Q15771 203 aa19.25■□□□□ 0.67
SHANK1-203ENST00000391813 PAMR1Q6UXH9 720 aa19.25■□□□□ 0.67
SHANK1-203ENST00000391813 SYVN1Q86TM6 617 aa19.25■□□□□ 0.67
SHANK1-203ENST00000391813 PM20D2Q8IYS1 436 aa19.25■□□□□ 0.67
SHANK1-203ENST00000391813 C15orf40Q8WUR7 153 aa19.25■□□□□ 0.67
SHANK1-203ENST00000391813 ART5Q96L15 291 aa19.25■□□□□ 0.67
SHANK1-203ENST00000391813 SLC6A15Q9H2J7 730 aa19.25■□□□□ 0.67
SHANK1-203ENST00000391813 POLR3BQ9NW08 1133 aaPredicted RBP19.25■□□□□ 0.67
SHANK1-203ENST00000391813 INSL6Q9Y581 213 aa19.25■□□□□ 0.67
SHANK1-203ENST00000391813 RIIAD1A6NNX1 92 aa19.25■□□□□ 0.67
SHANK1-203ENST00000391813 ZNF311Q5JNZ3 666 aa19.25■□□□□ 0.67
SHANK1-203ENST00000391813 TPGS1Q6ZTW0 290 aa19.25■□□□□ 0.67
SHANK1-203ENST00000391813 SLC15A4Q8N697 577 aa19.25■□□□□ 0.67
SHANK1-203ENST00000391813 PRR11Q96HE9 360 aaPredicted RBP19.25■□□□□ 0.67
SHANK1-203ENST00000391813 CEP295NLQ96MC4 621 aa19.25■□□□□ 0.67
SHANK1-203ENST00000391813 RIPOR3Q96MK2 946 aa19.25■□□□□ 0.67
SHANK1-203ENST00000391813 EVA1BQ9NVM1 165 aa19.25■□□□□ 0.67
SHANK1-203ENST00000391813 PTPRJQ12913 1337 aa19.25■□□□□ 0.67
SHANK1-203ENST00000391813 SERPINA3P01011 423 aa19.25■□□□□ 0.67
SHANK1-203ENST00000391813 ALDOAP04075 364 aaKnown RBP19.25■□□□□ 0.67
SHANK1-203ENST00000391813 HLA-DPB1P04440 258 aa19.25■□□□□ 0.67
SHANK1-203ENST00000391813 HTR1EP28566 365 aa19.25■□□□□ 0.67
SHANK1-203ENST00000391813 CLCN4P51793 760 aa19.25■□□□□ 0.67
SHANK1-203ENST00000391813 RAB2AP61019 212 aa19.25■□□□□ 0.67
SHANK1-203ENST00000391813 DUSP4Q13115 394 aa19.25■□□□□ 0.67
SHANK1-203ENST00000391813 IRF5Q13568 498 aa19.25■□□□□ 0.67
SHANK1-203ENST00000391813 GARNL3Q5VVW2 1013 aa19.25■□□□□ 0.67
SHANK1-203ENST00000391813 FBXO42Q6P3S6 717 aa19.25■□□□□ 0.67
SHANK1-203ENST00000391813 FBXL19Q6PCT2 694 aa19.25■□□□□ 0.67
SHANK1-203ENST00000391813 TOMM5Q8N4H5 51 aa19.25■□□□□ 0.67
SHANK1-203ENST00000391813 FAM98AQ8NCA5 519 aaKnown RBP19.25■□□□□ 0.67
SHANK1-203ENST00000391813 PXYLP1Q8TE99 480 aa19.25■□□□□ 0.67
SHANK1-203ENST00000391813 SNX27Q96L92 541 aa19.25■□□□□ 0.67
SHANK1-203ENST00000391813 PCDHGA11Q9Y5H2 935 aa19.25■□□□□ 0.67
SHANK1-203ENST00000391813 CD40LGP29965 261 aa19.25■□□□□ 0.67
SHANK1-203ENST00000391813 RPTNQ6XPR3 784 aa19.25■□□□□ 0.67
SHANK1-203ENST00000391813 CMAHPQ9Y471 501 aa19.25■□□□□ 0.67
SHANK1-203ENST00000391813 H7C2Y5 167 aa19.24■□□□□ 0.67
SHANK1-203ENST00000391813 SLC2A7Q6PXP3 512 aa19.24■□□□□ 0.67
SHANK1-203ENST00000391813 MYH8P13535 1937 aa19.24■□□□□ 0.67
SHANK1-203ENST00000391813 FAM47E-STBD1D6RA91 191 aa19.24■□□□□ 0.67
SHANK1-203ENST00000391813 NDUFB5O43674 189 aa19.24■□□□□ 0.67
SHANK1-203ENST00000391813 CFHP08603 1231 aa19.24■□□□□ 0.67
SHANK1-203ENST00000391813 CCR4P51679 360 aa19.24■□□□□ 0.67
SHANK1-203ENST00000391813 HEPACAMQ14CZ8 416 aa19.24■□□□□ 0.67
SHANK1-203ENST00000391813 BTBD16Q32M84 506 aa19.24■□□□□ 0.67
SHANK1-203ENST00000391813 MINDY1Q8N5J2 469 aa19.24■□□□□ 0.67
SHANK1-203ENST00000391813 NDRG1Q92597 394 aaKnown RBP19.24■□□□□ 0.67
SHANK1-203ENST00000391813 F2P00734 622 aa19.24■□□□□ 0.67
SHANK1-203ENST00000391813 DHRS4L1P0CG22 281 aa19.24■□□□□ 0.67
SHANK1-203ENST00000391813 RPS3P23396 243 aaKnown RBP eCLIP19.24■□□□□ 0.67
Retrieved 100 of 20,778 RNA–protein pairs in 24.7 ms