RNA–Protein interactions for RNA: ENST00000390466.1

TRAV39-201, Transcript of T cell receptor alpha variable 39, humanhuman

APPRIS P1 BASIC

Gene TRAV39, Length 331 nt, Biotype TR V gene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV39-201ENST00000390466 TRIM3O75382 744 aaPredicted RBP3.36□□□□□ -1.87
TRAV39-201ENST00000390466 CNMDO75829 334 aa3.36□□□□□ -1.87
TRAV39-201ENST00000390466 RECQL4O94761 1208 aa3.36□□□□□ -1.87
TRAV39-201ENST00000390466 TPPPO94811 219 aa3.36□□□□□ -1.87
TRAV39-201ENST00000390466 MFN2O95140 757 aa3.36□□□□□ -1.87
TRAV39-201ENST00000390466 LGI1O95970 557 aa3.36□□□□□ -1.87
TRAV39-201ENST00000390466 RECKO95980 971 aa3.36□□□□□ -1.87
TRAV39-201ENST00000390466 B3GALT4O96024 378 aa3.36□□□□□ -1.87
TRAV39-201ENST00000390466 C1QBP02746 253 aa3.36□□□□□ -1.87
TRAV39-201ENST00000390466 DNTTP04053 509 aa3.36□□□□□ -1.87
TRAV39-201ENST00000390466 YES1P07947 543 aa3.36□□□□□ -1.87
TRAV39-201ENST00000390466 MMP10P09238 476 aa3.36□□□□□ -1.87
TRAV39-201ENST00000390466 CSF3P09919 207 aa3.36□□□□□ -1.87
TRAV39-201ENST00000390466 PRSS56P0CW18 603 aa3.36□□□□□ -1.87
TRAV39-201ENST00000390466 TGFB3P10600 412 aa3.36□□□□□ -1.87
TRAV39-201ENST00000390466 DBTP11182 482 aaKnown RBP3.36□□□□□ -1.87
TRAV39-201ENST00000390466 CYP2A6P11509 494 aaPredicted RBP3.36□□□□□ -1.87
TRAV39-201ENST00000390466 ODC1P11926 461 aa3.36□□□□□ -1.87
TRAV39-201ENST00000390466 CYP4B1P13584 511 aa3.36□□□□□ -1.87
TRAV39-201ENST00000390466 KCNE1P15382 129 aa3.36□□□□□ -1.87
TRAV39-201ENST00000390466 HOXB8P17481 243 aaPredicted RBP3.36□□□□□ -1.87
TRAV39-201ENST00000390466 HOXB6P17509 224 aaKnown RBP3.36□□□□□ -1.87
TRAV39-201ENST00000390466 ALOX12P18054 663 aa3.36□□□□□ -1.87
TRAV39-201ENST00000390466 POLR2CP19387 275 aaPredicted RBP3.36□□□□□ -1.87
TRAV39-201ENST00000390466 MSH3P20585 1137 aa3.36□□□□□ -1.87
TRAV39-201ENST00000390466 ALAS2P22557 587 aa3.36□□□□□ -1.87
TRAV39-201ENST00000390466 CBLP22681 906 aa3.36□□□□□ -1.87
TRAV39-201ENST00000390466 PRKACBP22694 351 aa3.36□□□□□ -1.87
TRAV39-201ENST00000390466 ITGB7P26010 798 aa3.36□□□□□ -1.87
TRAV39-201ENST00000390466 HLA-DMAP28067 261 aa3.36□□□□□ -1.87
TRAV39-201ENST00000390466 C21orf33P30042 268 aaPredicted RBP3.36□□□□□ -1.87
TRAV39-201ENST00000390466 CHRNA5P30532 468 aa3.36□□□□□ -1.87
TRAV39-201ENST00000390466 IFNA8P32881 189 aa3.36□□□□□ -1.87
TRAV39-201ENST00000390466 TNFSF8P32971 234 aa3.36□□□□□ -1.87
TRAV39-201ENST00000390466 SOX11P35716 441 aa3.36□□□□□ -1.87
TRAV39-201ENST00000390466 GGT2P36268 569 aa3.36□□□□□ -1.87
TRAV39-201ENST00000390466 HNF4AP41235 474 aa3.36□□□□□ -1.87
TRAV39-201ENST00000390466 HTR2BP41595 481 aa3.36□□□□□ -1.87
TRAV39-201ENST00000390466 KIR2DL3P43628 341 aa3.36□□□□□ -1.87
TRAV39-201ENST00000390466 PRIM2P49643 509 aa3.36□□□□□ -1.87
TRAV39-201ENST00000390466 SERPINH1P50454 418 aaKnown RBP3.36□□□□□ -1.87
TRAV39-201ENST00000390466 ZNF140P52738 457 aaPredicted RBP3.36□□□□□ -1.87
TRAV39-201ENST00000390466 RABGGTBP53611 331 aa3.36□□□□□ -1.87
TRAV39-201ENST00000390466 SNX16P57768 344 aa3.36□□□□□ -1.87
TRAV39-201ENST00000390466 ZNF280AP59817 542 aaPredicted RBP3.36□□□□□ -1.87
TRAV39-201ENST00000390466 ERVPABLB-1P60509 514 aa3.36□□□□□ -1.87
TRAV39-201ENST00000390466 PSPHP78330 225 aa3.36□□□□□ -1.87
TRAV39-201ENST00000390466 VLDLRP98155 873 aa3.36□□□□□ -1.87
TRAV39-201ENST00000390466 IL5RAQ01344 420 aa3.36□□□□□ -1.87
TRAV39-201ENST00000390466 TSPY1Q01534 308 aa3.36□□□□□ -1.87
TRAV39-201ENST00000390466 ARHGAP1Q07960 439 aa3.36□□□□□ -1.87
TRAV39-201ENST00000390466 FAPQ12884 760 aa3.36□□□□□ -1.87
TRAV39-201ENST00000390466 KRR1Q13601 381 aaKnown RBP3.36□□□□□ -1.87
TRAV39-201ENST00000390466 DGCR6Q14129 220 aa3.36□□□□□ -1.87
TRAV39-201ENST00000390466 MFSD13AQ14CX5 517 aa3.36□□□□□ -1.87
TRAV39-201ENST00000390466 LAPTM4AQ15012 233 aa3.36□□□□□ -1.87
TRAV39-201ENST00000390466 PCBP2Q15366 365 aaKnown RBP eCLIP3.36□□□□□ -1.87
TRAV39-201ENST00000390466 TSNQ15631 228 aaKnown RBP3.36□□□□□ -1.87
TRAV39-201ENST00000390466 PFKFB4Q16877 469 aa3.36□□□□□ -1.87
TRAV39-201ENST00000390466 TIGD6Q17RP2 521 aa3.36□□□□□ -1.87
TRAV39-201ENST00000390466 SMU1Q2TAY7 513 aa3.36□□□□□ -1.87
TRAV39-201ENST00000390466 ZNF800Q2TB10 664 aaPredicted RBP eCLIP3.36□□□□□ -1.87
TRAV39-201ENST00000390466 HKDC1Q2TB90 917 aa3.36□□□□□ -1.87
TRAV39-201ENST00000390466 DCAF4L1Q3SXM0 396 aa3.36□□□□□ -1.87
TRAV39-201ENST00000390466 TTLL9Q3SXZ7 439 aa3.36□□□□□ -1.87
TRAV39-201ENST00000390466 C5orf22Q49AR2 442 aa3.36□□□□□ -1.87
TRAV39-201ENST00000390466 FBXO43Q4G163 708 aa3.36□□□□□ -1.87
TRAV39-201ENST00000390466 MPPE1Q53F39 396 aa3.36□□□□□ -1.87
TRAV39-201ENST00000390466 FBXO48Q5FWF7 155 aa3.36□□□□□ -1.87
TRAV39-201ENST00000390466 ZMAT1Q5H9K5 638 aa3.36□□□□□ -1.87
TRAV39-201ENST00000390466 SPANXN4Q5MJ08 99 aa3.36□□□□□ -1.87
TRAV39-201ENST00000390466 CTSL3PQ5NE16 218 aa3.36□□□□□ -1.87
TRAV39-201ENST00000390466 UBXN11Q5T124 520 aa3.36□□□□□ -1.87
TRAV39-201ENST00000390466 PIK3R6Q5UE93 754 aa3.36□□□□□ -1.87
TRAV39-201ENST00000390466 FAM205BPQ63HN1 556 aa3.36□□□□□ -1.87
TRAV39-201ENST00000390466 ANKS6Q68DC2 871 aa3.36□□□□□ -1.87
TRAV39-201ENST00000390466 TIGD3Q6B0B8 471 aa3.36□□□□□ -1.87
TRAV39-201ENST00000390466 IL31Q6EBC2 164 aa3.36□□□□□ -1.87
TRAV39-201ENST00000390466 ALG1LQ6GMV1 187 aa3.36□□□□□ -1.87
TRAV39-201ENST00000390466 OR2T5Q6IEZ7 315 aa3.36□□□□□ -1.87
TRAV39-201ENST00000390466 RGMBQ6NW40 437 aa3.36□□□□□ -1.87
TRAV39-201ENST00000390466 EFCAB12Q6NXP0 572 aa3.36□□□□□ -1.87
TRAV39-201ENST00000390466 TMEM65Q6PI78 240 aa3.36□□□□□ -1.87
TRAV39-201ENST00000390466 TRAF7Q6Q0C0 670 aa3.36□□□□□ -1.87
TRAV39-201ENST00000390466 SCIMPQ6UWF3 145 aa3.36□□□□□ -1.87
TRAV39-201ENST00000390466 SUSD1Q6UWL2 747 aa3.36□□□□□ -1.87
TRAV39-201ENST00000390466 TMEM92Q6UXU6 159 aa3.36□□□□□ -1.87
TRAV39-201ENST00000390466 LBX2Q6XYB7 198 aa3.36□□□□□ -1.87
TRAV39-201ENST00000390466 ZNF517Q6ZMY9 492 aaPredicted RBP3.36□□□□□ -1.87
TRAV39-201ENST00000390466 Q6ZPB1 254 aaPredicted RBP3.36□□□□□ -1.87
TRAV39-201ENST00000390466 GPRIN3Q6ZVF9 776 aa3.36□□□□□ -1.87
TRAV39-201ENST00000390466 AHSA2Q719I0 299 aa3.36□□□□□ -1.87
TRAV39-201ENST00000390466 PDZD4Q76G19 769 aaPredicted RBP3.36□□□□□ -1.87
TRAV39-201ENST00000390466 TRILQ7L0X0 811 aa3.36□□□□□ -1.87
TRAV39-201ENST00000390466 ZNF367Q7RTV3 350 aa3.36□□□□□ -1.87
TRAV39-201ENST00000390466 GALNT5Q7Z7M9 940 aa3.36□□□□□ -1.87
TRAV39-201ENST00000390466 DDX53Q86TM3 631 aaKnown RBP3.36□□□□□ -1.87
TRAV39-201ENST00000390466 RNF130Q86XS8 419 aa3.36□□□□□ -1.87
TRAV39-201ENST00000390466 PTOV1Q86YD1 416 aa3.36□□□□□ -1.87
TRAV39-201ENST00000390466 GATAD2AQ86YP4 633 aa3.36□□□□□ -1.87
Retrieved 100 of 20,778 RNA–protein pairs in 32.1 ms