RNA–Protein interactions for RNA: ENST00000384664.1

RNU6-1060P-201, Transcript of RNA, U6 small nuclear 1060, pseudogene, humanhuman

BASIC

Gene RNU6-1060P, Length 107 nt, Biotype snRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU6-1060P-201ENST00000384664 CLDN15P56746 228 aa2.73□□□□□ -1.97
RNU6-1060P-201ENST00000384664 POLR2LP62875 67 aaKnown RBP2.73□□□□□ -1.97
RNU6-1060P-201ENST00000384664 ZNF415Q09FC8 603 aa2.73□□□□□ -1.97
RNU6-1060P-201ENST00000384664 TAF10Q12962 218 aa2.73□□□□□ -1.97
RNU6-1060P-201ENST00000384664 RALGDSQ12967 914 aa2.73□□□□□ -1.97
RNU6-1060P-201ENST00000384664 PRPF4BQ13523 1007 aaKnown RBP2.73□□□□□ -1.97
RNU6-1060P-201ENST00000384664 CUL3Q13618 768 aa2.73□□□□□ -1.97
RNU6-1060P-201ENST00000384664 KCTD2Q14681 263 aa2.73□□□□□ -1.97
RNU6-1060P-201ENST00000384664 RASA2Q15283 850 aa2.73□□□□□ -1.97
RNU6-1060P-201ENST00000384664 LETM2Q2VYF4 491 aa2.73□□□□□ -1.97
RNU6-1060P-201ENST00000384664 XKR3Q5GH77 459 aa2.73□□□□□ -1.97
RNU6-1060P-201ENST00000384664 FFAR4Q5NUL3 377 aa2.73□□□□□ -1.97
RNU6-1060P-201ENST00000384664 C6orf163Q5TEZ5 329 aa2.73□□□□□ -1.97
RNU6-1060P-201ENST00000384664 NUP54Q7Z3B4 507 aa2.73□□□□□ -1.97
RNU6-1060P-201ENST00000384664 KIRREL3Q8IZU9 778 aa2.73□□□□□ -1.97
RNU6-1060P-201ENST00000384664 HCAR2Q8TDS4 363 aa2.73□□□□□ -1.97
RNU6-1060P-201ENST00000384664 MRGPRDQ8TDS7 321 aa2.73□□□□□ -1.97
RNU6-1060P-201ENST00000384664 HDAC11Q96DB2 347 aa2.73□□□□□ -1.97
RNU6-1060P-201ENST00000384664 PRAC1Q96KF2 57 aa2.73□□□□□ -1.97
RNU6-1060P-201ENST00000384664 FAM20AQ96MK3 541 aa2.73□□□□□ -1.97
RNU6-1060P-201ENST00000384664 CPNE1Q99829 537 aa2.73□□□□□ -1.97
RNU6-1060P-201ENST00000384664 MTMR12Q9C0I1 747 aa2.73□□□□□ -1.97
RNU6-1060P-201ENST00000384664 WDR13Q9H1Z4 485 aa2.73□□□□□ -1.97
RNU6-1060P-201ENST00000384664 Q9H8V8 135 aa2.73□□□□□ -1.97
RNU6-1060P-201ENST00000384664 ATAD3AQ9NVI7 634 aa2.73□□□□□ -1.97
RNU6-1060P-201ENST00000384664 RNF186Q9NXI6 227 aa2.73□□□□□ -1.97
RNU6-1060P-201ENST00000384664 BARHL2Q9NY43 387 aa2.73□□□□□ -1.97
RNU6-1060P-201ENST00000384664 C5AR2Q9P296 337 aa2.73□□□□□ -1.97
RNU6-1060P-201ENST00000384664 STUB1Q9UNE7 303 aa2.73□□□□□ -1.97
RNU6-1060P-201ENST00000384664 KCNK7Q9Y2U2 307 aa2.73□□□□□ -1.97
RNU6-1060P-201ENST00000384664 RPS6KL1Q9Y6S9 549 aa2.73□□□□□ -1.97
RNU6-1060P-201ENST00000384664 A0A1W2PPK0 400 aa2.72□□□□□ -1.97
RNU6-1060P-201ENST00000384664 CLDN4O14493 209 aa2.72□□□□□ -1.97
RNU6-1060P-201ENST00000384664 GLRA3O75311 464 aa2.72□□□□□ -1.97
RNU6-1060P-201ENST00000384664 TADA2AO75478 443 aa2.72□□□□□ -1.97
RNU6-1060P-201ENST00000384664 CDK2AP2O75956 126 aa2.72□□□□□ -1.97
RNU6-1060P-201ENST00000384664 GAS8-AS1O95177 125 aa2.72□□□□□ -1.97
RNU6-1060P-201ENST00000384664 CELF2O95319 508 aaKnown RBP2.72□□□□□ -1.97
RNU6-1060P-201ENST00000384664 CGAP01215 116 aa2.72□□□□□ -1.97
RNU6-1060P-201ENST00000384664 HMBSP08397 361 aa2.72□□□□□ -1.97
RNU6-1060P-201ENST00000384664 EPCAMP16422 314 aa2.72□□□□□ -1.97
RNU6-1060P-201ENST00000384664 CD22P20273 847 aa2.72□□□□□ -1.97
RNU6-1060P-201ENST00000384664 CDH3P22223 829 aa2.72□□□□□ -1.97
RNU6-1060P-201ENST00000384664 ACHEP22303 614 aa2.72□□□□□ -1.97
RNU6-1060P-201ENST00000384664 CPT2P23786 658 aa2.72□□□□□ -1.97
RNU6-1060P-201ENST00000384664 EEF1B2P24534 225 aaKnown RBP2.72□□□□□ -1.97
RNU6-1060P-201ENST00000384664 MC5RP33032 325 aa2.72□□□□□ -1.97
RNU6-1060P-201ENST00000384664 BMXP51813 675 aa2.72□□□□□ -1.97
RNU6-1060P-201ENST00000384664 RAD23AP54725 363 aa2.72□□□□□ -1.97
RNU6-1060P-201ENST00000384664 ERVK11-1P61568 191 aa2.72□□□□□ -1.97
RNU6-1060P-201ENST00000384664 RBPJQ06330 500 aa2.72□□□□□ -1.97
RNU6-1060P-201ENST00000384664 KLC1Q07866 573 aa2.72□□□□□ -1.97
RNU6-1060P-201ENST00000384664 TNIP1Q15025 636 aa2.72□□□□□ -1.97
RNU6-1060P-201ENST00000384664 HERC3Q15034 1050 aa2.72□□□□□ -1.97
RNU6-1060P-201ENST00000384664 NPTX1Q15818 432 aa2.72□□□□□ -1.97
RNU6-1060P-201ENST00000384664 ZFP69Q49AA0 526 aa2.72□□□□□ -1.97
RNU6-1060P-201ENST00000384664 MCMDC2Q4G0Z9 681 aa2.72□□□□□ -1.97
RNU6-1060P-201ENST00000384664 SLC35D3Q5M8T2 416 aa2.72□□□□□ -1.97
RNU6-1060P-201ENST00000384664 ARHGEF16Q5VV41 709 aa2.72□□□□□ -1.97
RNU6-1060P-201ENST00000384664 IL17RELQ6ZVW7 336 aa2.72□□□□□ -1.97
RNU6-1060P-201ENST00000384664 DET1Q7L5Y6 550 aa2.72□□□□□ -1.97
RNU6-1060P-201ENST00000384664 ARHGAP22Q7Z5H3 698 aa2.72□□□□□ -1.97
RNU6-1060P-201ENST00000384664 RTN4RL2Q86UN3 420 aa2.72□□□□□ -1.97
RNU6-1060P-201ENST00000384664 KRTAP7-1Q8IUC3 87 aa2.72□□□□□ -1.97
RNU6-1060P-201ENST00000384664 DCLK2Q8N568 766 aa2.72□□□□□ -1.97
RNU6-1060P-201ENST00000384664 PI4KAP1Q8N8J0 262 aa2.72□□□□□ -1.97
RNU6-1060P-201ENST00000384664 OR5AP2Q8NGF4 316 aa2.72□□□□□ -1.97
RNU6-1060P-201ENST00000384664 OR4C3Q8NH37 302 aa2.72□□□□□ -1.97
RNU6-1060P-201ENST00000384664 ROBO4Q8WZ75 1007 aa2.72□□□□□ -1.97
RNU6-1060P-201ENST00000384664 SUSD6Q92537 303 aa2.72□□□□□ -1.97
RNU6-1060P-201ENST00000384664 CENPOQ9BU64 300 aa2.72□□□□□ -1.97
RNU6-1060P-201ENST00000384664 SLC25A23Q9BV35 468 aa2.72□□□□□ -1.97
RNU6-1060P-201ENST00000384664 SHARPINQ9H0F6 387 aa2.72□□□□□ -1.97
RNU6-1060P-201ENST00000384664 TMX4Q9H1E5 349 aaPredicted RBP2.72□□□□□ -1.97
RNU6-1060P-201ENST00000384664 RABEP2Q9H5N1 569 aa2.72□□□□□ -1.97
RNU6-1060P-201ENST00000384664 ATP13A3Q9H7F0 1226 aa2.72□□□□□ -1.97
RNU6-1060P-201ENST00000384664 CDH20Q9HBT6 801 aa2.72□□□□□ -1.97
RNU6-1060P-201ENST00000384664 ZDHHC18Q9NUE0 388 aa2.72□□□□□ -1.97
RNU6-1060P-201ENST00000384664 P4HTMQ9NXG6 502 aa2.72□□□□□ -1.97
RNU6-1060P-201ENST00000384664 BCCIPQ9P287 314 aaKnown RBP eCLIP2.72□□□□□ -1.97
RNU6-1060P-201ENST00000384664 CASTOR2A6NHX0 329 aa2.71□□□□□ -1.98
RNU6-1060P-201ENST00000384664 CCDC188H7C350 402 aa2.71□□□□□ -1.98
RNU6-1060P-201ENST00000384664 ARPC2O15144 300 aa2.71□□□□□ -1.98
RNU6-1060P-201ENST00000384664 CDC123O75794 336 aaPredicted RBP2.71□□□□□ -1.98
RNU6-1060P-201ENST00000384664 KRT33AO76009 404 aa2.71□□□□□ -1.98
RNU6-1060P-201ENST00000384664 SLCO2B1O94956 709 aa2.71□□□□□ -1.98
RNU6-1060P-201ENST00000384664 IRF2P14316 349 aa2.71□□□□□ -1.98
RNU6-1060P-201ENST00000384664 CYP11B2P19099 503 aa2.71□□□□□ -1.98
RNU6-1060P-201ENST00000384664 JAK1P23458 1154 aa2.71□□□□□ -1.98
RNU6-1060P-201ENST00000384664 KRT20P35900 424 aa2.71□□□□□ -1.98
RNU6-1060P-201ENST00000384664 LUMP51884 338 aaPredicted RBP2.71□□□□□ -1.98
RNU6-1060P-201ENST00000384664 ACSM1Q08AH1 577 aa2.71□□□□□ -1.98
RNU6-1060P-201ENST00000384664 PHKG1Q16816 387 aa2.71□□□□□ -1.98
RNU6-1060P-201ENST00000384664 C14orf177Q52M58 125 aa2.71□□□□□ -1.98
RNU6-1060P-201ENST00000384664 G2E3Q7L622 706 aa2.71□□□□□ -1.98
RNU6-1060P-201ENST00000384664 CHST3Q7LGC8 479 aa2.71□□□□□ -1.98
RNU6-1060P-201ENST00000384664 MMD2Q8IY49 270 aa2.71□□□□□ -1.98
RNU6-1060P-201ENST00000384664 EID3Q8N140 333 aa2.71□□□□□ -1.98
RNU6-1060P-201ENST00000384664 NDUFAF2Q8N183 169 aa2.71□□□□□ -1.98
RNU6-1060P-201ENST00000384664 CCDC191Q8NCU4 936 aa2.71□□□□□ -1.98
Retrieved 100 of 20,778 RNA–protein pairs in 54 ms