RNA–Protein interactions for RNA: ENST00000384254.1

RNU6-40P-201, Transcript of RNA, U6 small nuclear 40, pseudogene, humanhuman

BASIC

Gene RNU6-40P, Length 107 nt, Biotype snRNA, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU6-40P-201ENST00000384254 AMIGO1Q86WK6 493 aa5.04□□□□□ -1.6
RNU6-40P-201ENST00000384254 TMEM139Q8IV31 216 aa5.04□□□□□ -1.6
RNU6-40P-201ENST00000384254 LGI2Q8N0V4 545 aa5.04□□□□□ -1.6
RNU6-40P-201ENST00000384254 ANKRD13CQ8N6S4 541 aa5.04□□□□□ -1.6
RNU6-40P-201ENST00000384254 RASGEF1AQ8N9B8 481 aa5.04□□□□□ -1.6
RNU6-40P-201ENST00000384254 OR4K1Q8NGD4 311 aa5.04□□□□□ -1.6
RNU6-40P-201ENST00000384254 SPATA20Q8TB22 786 aa5.04□□□□□ -1.6
RNU6-40P-201ENST00000384254 UTP14AQ9BVJ6 771 aaKnown RBP5.04□□□□□ -1.6
RNU6-40P-201ENST00000384254 TFB2MQ9H5Q4 396 aaKnown RBP5.04□□□□□ -1.6
RNU6-40P-201ENST00000384254 GSN-AS1Q9NRJ2 163 aa5.04□□□□□ -1.6
RNU6-40P-201ENST00000384254 VPS18Q9P253 973 aa5.04□□□□□ -1.6
RNU6-40P-201ENST00000384254 MTRRQ9UBK8 725 aa5.04□□□□□ -1.6
RNU6-40P-201ENST00000384254 LEF1Q9UJU2 399 aaPredicted RBP5.04□□□□□ -1.6
RNU6-40P-201ENST00000384254 TRIM17Q9Y577 477 aa5.04□□□□□ -1.6
RNU6-40P-201ENST00000384254 IGKV2D-30A0A075B6S6 120 aa5.03□□□□□ -1.6
RNU6-40P-201ENST00000384254 TRAV24A0A0B4J272 114 aa5.03□□□□□ -1.6
RNU6-40P-201ENST00000384254 A0A1W2PN81 502 aa5.03□□□□□ -1.6
RNU6-40P-201ENST00000384254 A4D1N5 150 aa5.03□□□□□ -1.6
RNU6-40P-201ENST00000384254 DUXAA6NLW8 204 aa5.03□□□□□ -1.6
RNU6-40P-201ENST00000384254 YDJCA8MPS7 323 aa5.03□□□□□ -1.6
RNU6-40P-201ENST00000384254 ARPC2O15144 300 aa5.03□□□□□ -1.6
RNU6-40P-201ENST00000384254 SNX3O60493 162 aa5.03□□□□□ -1.6
RNU6-40P-201ENST00000384254 PIGNO95427 931 aa5.03□□□□□ -1.6
RNU6-40P-201ENST00000384254 PLA2G2AP14555 144 aa5.03□□□□□ -1.6
RNU6-40P-201ENST00000384254 ATP6V1B1P15313 513 aa5.03□□□□□ -1.6
RNU6-40P-201ENST00000384254 CHRNA7P36544 502 aa5.03□□□□□ -1.6
RNU6-40P-201ENST00000384254 ZNF415Q09FC8 603 aa5.03□□□□□ -1.6
RNU6-40P-201ENST00000384254 TNK1Q13470 666 aa5.03□□□□□ -1.6
RNU6-40P-201ENST00000384254 TAZQ16635 292 aa5.03□□□□□ -1.6
RNU6-40P-201ENST00000384254 ZNF674Q2M3X9 581 aa5.03□□□□□ -1.6
RNU6-40P-201ENST00000384254 TYSND1Q2T9J0 566 aa5.03□□□□□ -1.6
RNU6-40P-201ENST00000384254 SMU1Q2TAY7 513 aa5.03□□□□□ -1.6
RNU6-40P-201ENST00000384254 UGT3A2Q3SY77 523 aa5.03□□□□□ -1.6
RNU6-40P-201ENST00000384254 CYP4A22Q5TCH4 519 aa5.03□□□□□ -1.6
RNU6-40P-201ENST00000384254 TXNRD3NBQ6F5E7 133 aa5.03□□□□□ -1.6
RNU6-40P-201ENST00000384254 CAPRIN2Q6IMN6 1127 aaKnown RBP5.03□□□□□ -1.6
RNU6-40P-201ENST00000384254 GDPD4Q6W3E5 623 aa5.03□□□□□ -1.6
RNU6-40P-201ENST00000384254 FOXP4Q8IVH2 680 aaPredicted RBP5.03□□□□□ -1.6
RNU6-40P-201ENST00000384254 TUSC5Q8IXB3 177 aa5.03□□□□□ -1.6
RNU6-40P-201ENST00000384254 SYCP3Q8IZU3 236 aa5.03□□□□□ -1.6
RNU6-40P-201ENST00000384254 C10orf53Q8N6V4 93 aa5.03□□□□□ -1.6
RNU6-40P-201ENST00000384254 Q8N9P0 234 aaPredicted RBP5.03□□□□□ -1.6
RNU6-40P-201ENST00000384254 NOA1Q8NC60 698 aaKnown RBP5.03□□□□□ -1.6
RNU6-40P-201ENST00000384254 OR11H4Q8NGC9 324 aa5.03□□□□□ -1.6
RNU6-40P-201ENST00000384254 SLC26A7Q8TE54 656 aa5.03□□□□□ -1.6
RNU6-40P-201ENST00000384254 ST6GALNAC6Q969X2 333 aa5.03□□□□□ -1.6
RNU6-40P-201ENST00000384254 ST6GAL2Q96JF0 529 aa5.03□□□□□ -1.6
RNU6-40P-201ENST00000384254 FAM71F1Q96KD3 344 aaPredicted RBP5.03□□□□□ -1.6
RNU6-40P-201ENST00000384254 PARK7Q99497 189 aaKnown RBP5.03□□□□□ -1.6
RNU6-40P-201ENST00000384254 FUT8Q9BYC5 575 aa5.03□□□□□ -1.6
RNU6-40P-201ENST00000384254 MINDY3Q9H8M7 445 aa5.03□□□□□ -1.6
RNU6-40P-201ENST00000384254 TAAR2Q9P1P5 351 aa5.03□□□□□ -1.6
RNU6-40P-201ENST00000384254 LIPT1Q9Y234 373 aa5.03□□□□□ -1.6
RNU6-40P-201ENST00000384254 IGSF1Q8N6C5 1336 aa5.02□□□□□ -1.61
RNU6-40P-201ENST00000384254 SLC33A1O00400 549 aaPredicted RBP5.02□□□□□ -1.61
RNU6-40P-201ENST00000384254 SLC30A4O14863 429 aa5.02□□□□□ -1.61
RNU6-40P-201ENST00000384254 ZNF263O14978 683 aa5.02□□□□□ -1.61
RNU6-40P-201ENST00000384254 PPIP5K2O43314 1243 aa5.02□□□□□ -1.61
RNU6-40P-201ENST00000384254 BUB3O43684 328 aa5.02□□□□□ -1.61
RNU6-40P-201ENST00000384254 PRKRAO75569 313 aaKnown RBP5.02□□□□□ -1.61
RNU6-40P-201ENST00000384254 GSRP00390 522 aa5.02□□□□□ -1.61
RNU6-40P-201ENST00000384254 TCF4P15884 667 aa5.02□□□□□ -1.61
RNU6-40P-201ENST00000384254 CDH3P22223 829 aa5.02□□□□□ -1.61
RNU6-40P-201ENST00000384254 MFAP3P55082 362 aa5.02□□□□□ -1.61
RNU6-40P-201ENST00000384254 CTU2Q2VPK5 515 aaKnown RBP5.02□□□□□ -1.61
RNU6-40P-201ENST00000384254 ITPRIPL2Q3MIP1 535 aa5.02□□□□□ -1.61
RNU6-40P-201ENST00000384254 PHLDA2Q53GA4 152 aa5.02□□□□□ -1.61
RNU6-40P-201ENST00000384254 LACTB2Q53H82 288 aaPredicted RBP5.02□□□□□ -1.61
RNU6-40P-201ENST00000384254 CCNYL2Q5T2Q4 361 aa5.02□□□□□ -1.61
RNU6-40P-201ENST00000384254 NOTUMQ6P988 496 aa5.02□□□□□ -1.61
RNU6-40P-201ENST00000384254 IYDQ6PHW0 289 aa5.02□□□□□ -1.61
RNU6-40P-201ENST00000384254 TMEM182Q6ZP80 229 aaPredicted RBP5.02□□□□□ -1.61
RNU6-40P-201ENST00000384254 LINC00696Q6ZRV3 163 aa5.02□□□□□ -1.61
RNU6-40P-201ENST00000384254 RBM23Q86U06 439 aaKnown RBP5.02□□□□□ -1.61
RNU6-40P-201ENST00000384254 NFE4Q86UQ8 179 aa5.02□□□□□ -1.61
RNU6-40P-201ENST00000384254 MMD2Q8IY49 270 aa5.02□□□□□ -1.61
RNU6-40P-201ENST00000384254 OCC1Q8TAD7 63 aa5.02□□□□□ -1.61
RNU6-40P-201ENST00000384254 TEKT1Q969V4 418 aa5.02□□□□□ -1.61
RNU6-40P-201ENST00000384254 SLC47A1Q96FL8 570 aa5.02□□□□□ -1.61
RNU6-40P-201ENST00000384254 PGM2Q96G03 612 aa5.02□□□□□ -1.61
RNU6-40P-201ENST00000384254 ZNF354BQ96LW1 612 aa5.02□□□□□ -1.61
RNU6-40P-201ENST00000384254 AK8Q96MA6 479 aa5.02□□□□□ -1.61
RNU6-40P-201ENST00000384254 CCDC43Q96MW1 224 aaKnown RBP5.02□□□□□ -1.61
RNU6-40P-201ENST00000384254 RHNO1Q9BSD3 238 aa5.02□□□□□ -1.61
RNU6-40P-201ENST00000384254 KRTAP4-11Q9BYQ6 195 aa5.02□□□□□ -1.61
RNU6-40P-201ENST00000384254 SLC2A11Q9BYW1 496 aa5.02□□□□□ -1.61
RNU6-40P-201ENST00000384254 ZMYND12Q9H0C1 365 aa5.02□□□□□ -1.61
RNU6-40P-201ENST00000384254 TRPV4Q9HBA0 871 aa5.02□□□□□ -1.61
RNU6-40P-201ENST00000384254 TUFT1Q9NNX1 390 aa5.02□□□□□ -1.61
RNU6-40P-201ENST00000384254 DNAJC4Q9NNZ3 241 aa5.02□□□□□ -1.61
RNU6-40P-201ENST00000384254 FGF21Q9NSA1 209 aa5.02□□□□□ -1.61
RNU6-40P-201ENST00000384254 SEPT10Q9P0V9 454 aa5.02□□□□□ -1.61
RNU6-40P-201ENST00000384254 WDR83OSQ9Y284 106 aa5.02□□□□□ -1.61
RNU6-40P-201ENST00000384254 C5orf52A6NGY3 159 aa5.01□□□□□ -1.61
RNU6-40P-201ENST00000384254 XPNPEP2O43895 674 aa5.01□□□□□ -1.61
RNU6-40P-201ENST00000384254 PRKNO60260 465 aaPredicted RBP5.01□□□□□ -1.61
RNU6-40P-201ENST00000384254 BAG2O95816 211 aa5.01□□□□□ -1.61
RNU6-40P-201ENST00000384254 STAG3L1P0CL83 205 aa5.01□□□□□ -1.61
RNU6-40P-201ENST00000384254 LGALS3BPQ08380 585 aa5.01□□□□□ -1.61
RNU6-40P-201ENST00000384254 RCN2Q14257 317 aa5.01□□□□□ -1.61
Retrieved 100 of 20,778 RNA–protein pairs in 29.7 ms