RNA–Protein interactions for RNA: ENST00000380152.7

BRCA2-201, Transcript of BRCA2, DNA repair associated, humanhuman

APPRIS P1 TSL 5 BASIC

Gene BRCA2, Length 11,986 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA2-201ENST00000380152 ATL1Q8WXF7 558 aa4.1□□□□□ -1.75
BRCA2-201ENST00000380152 PHOX2BQ99453 314 aa4.1□□□□□ -1.75
BRCA2-201ENST00000380152 OR2B2Q9GZK3 357 aa4.1□□□□□ -1.75
BRCA2-201ENST00000380152 MINDY3Q9H8M7 445 aa4.1□□□□□ -1.75
BRCA2-201ENST00000380152 USP29Q9HBJ7 922 aa4.1□□□□□ -1.75
BRCA2-201ENST00000380152 CCM2LQ9NUG4 571 aaPredicted RBP4.1□□□□□ -1.75
BRCA2-201ENST00000380152 PAK1IP1Q9NWT1 392 aaPredicted RBP4.1□□□□□ -1.75
BRCA2-201ENST00000380152 MCM3APO60318 1980 aa4.1□□□□□ -1.75
BRCA2-201ENST00000380152 POLR2AP24928 1970 aaKnown RBP4.1□□□□□ -1.75
BRCA2-201ENST00000380152 GLYATL1P3A0A0U1RQE8 302 aa4.1□□□□□ -1.75
BRCA2-201ENST00000380152 SMIM35A0A1B0GVV1 85 aa4.1□□□□□ -1.75
BRCA2-201ENST00000380152 ECI2O75521 394 aa4.1□□□□□ -1.75
BRCA2-201ENST00000380152 SLC25A12O75746 678 aa4.1□□□□□ -1.75
BRCA2-201ENST00000380152 OR2B3O76000 313 aa4.1□□□□□ -1.75
BRCA2-201ENST00000380152 INMTO95050 263 aa4.1□□□□□ -1.75
BRCA2-201ENST00000380152 CDRT1O95170 752 aa4.1□□□□□ -1.75
BRCA2-201ENST00000380152 GLUD1P00367 558 aa4.1□□□□□ -1.75
BRCA2-201ENST00000380152 IFNW1P05000 195 aa4.1□□□□□ -1.75
BRCA2-201ENST00000380152 GPR1P46091 355 aa4.1□□□□□ -1.75
BRCA2-201ENST00000380152 NIPAL4Q0D2K0 466 aa4.1□□□□□ -1.75
BRCA2-201ENST00000380152 GRB7Q14451 532 aa4.1□□□□□ -1.75
BRCA2-201ENST00000380152 TAF1AQ15573 450 aaPredicted RBP4.1□□□□□ -1.75
BRCA2-201ENST00000380152 CRTC2Q53ET0 693 aaPredicted RBP4.1□□□□□ -1.75
BRCA2-201ENST00000380152 RBM20Q5T481 1227 aaKnown RBP4.1□□□□□ -1.75
BRCA2-201ENST00000380152 BTN2A1Q7KYR7 527 aa4.1□□□□□ -1.75
BRCA2-201ENST00000380152 TMEM135Q86UB9 458 aa4.1□□□□□ -1.75
BRCA2-201ENST00000380152 ANKRD13BQ86YJ7 626 aa4.1□□□□□ -1.75
BRCA2-201ENST00000380152 COLGALT2Q8IYK4 626 aa4.1□□□□□ -1.75
BRCA2-201ENST00000380152 TMEM199Q8N511 208 aa4.1□□□□□ -1.75
BRCA2-201ENST00000380152 FAM98AQ8NCA5 519 aaKnown RBP4.1□□□□□ -1.75
BRCA2-201ENST00000380152 NKD1Q969G9 470 aa4.1□□□□□ -1.75
BRCA2-201ENST00000380152 C8orf48Q96LL4 319 aa4.1□□□□□ -1.75
BRCA2-201ENST00000380152 FERD3LQ96RJ6 166 aa4.1□□□□□ -1.75
BRCA2-201ENST00000380152 BCL2L14Q9BZR8 327 aa4.1□□□□□ -1.75
BRCA2-201ENST00000380152 GPN1Q9HCN4 374 aaPredicted RBP4.1□□□□□ -1.75
BRCA2-201ENST00000380152 CHURC1-FNTBB4DL54 471 aa4.1□□□□□ -1.75
BRCA2-201ENST00000380152 KPNA6O60684 536 aa4.1□□□□□ -1.75
BRCA2-201ENST00000380152 CELF2O95319 508 aaKnown RBP4.1□□□□□ -1.75
BRCA2-201ENST00000380152 NDST3O95803 873 aa4.1□□□□□ -1.75
BRCA2-201ENST00000380152 DNTTP04053 509 aa4.1□□□□□ -1.75
BRCA2-201ENST00000380152 HIST1H2ABP04908 130 aa4.1□□□□□ -1.75
BRCA2-201ENST00000380152 PPIBP23284 216 aaKnown RBP4.1□□□□□ -1.75
BRCA2-201ENST00000380152 PTGER3P43115 390 aa4.1□□□□□ -1.75
BRCA2-201ENST00000380152 CMPK2Q5EBM0 449 aa4.1□□□□□ -1.75
BRCA2-201ENST00000380152 HFE2Q6ZVN8 426 aa4.1□□□□□ -1.75
BRCA2-201ENST00000380152 HIST3H2AQ7L7L0 130 aa4.1□□□□□ -1.75
BRCA2-201ENST00000380152 PQLC3Q8N755 202 aa4.1□□□□□ -1.75
BRCA2-201ENST00000380152 MAPK15Q8TD08 544 aa4.1□□□□□ -1.75
BRCA2-201ENST00000380152 HIST1H2ACQ93077 130 aa4.1□□□□□ -1.75
BRCA2-201ENST00000380152 PCDHGB3Q9Y5G1 929 aa4.1□□□□□ -1.75
BRCA2-201ENST00000380152 PCDHGA4Q9Y5G9 962 aa4.1□□□□□ -1.75
BRCA2-201ENST00000380152 SLC7A4O43246 635 aa4.1□□□□□ -1.75
BRCA2-201ENST00000380152 TFAP2AP05549 437 aa4.1□□□□□ -1.75
BRCA2-201ENST00000380152 SPATA31D3P0C874 917 aa4.1□□□□□ -1.75
BRCA2-201ENST00000380152 CPN2P22792 545 aa4.1□□□□□ -1.75
BRCA2-201ENST00000380152 PPP5CP53041 499 aa4.1□□□□□ -1.75
BRCA2-201ENST00000380152 TUBA3CQ13748 450 aa4.1□□□□□ -1.75
BRCA2-201ENST00000380152 FBXO43Q4G163 708 aa4.1□□□□□ -1.75
BRCA2-201ENST00000380152 SPATA31D4Q6ZUB0 917 aa4.1□□□□□ -1.75
BRCA2-201ENST00000380152 FAM220AQ7Z4H9 259 aa4.1□□□□□ -1.75
BRCA2-201ENST00000380152 IQCHQ86VS3 1027 aa4.1□□□□□ -1.75
BRCA2-201ENST00000380152 IPCEF1Q8WWN9 437 aaPredicted RBP4.1□□□□□ -1.75
BRCA2-201ENST00000380152 UFD1Q92890 307 aa4.1□□□□□ -1.75
BRCA2-201ENST00000380152 ACBD6Q9BR61 282 aa4.1□□□□□ -1.75
BRCA2-201ENST00000380152 TFB2MQ9H5Q4 396 aaKnown RBP4.1□□□□□ -1.75
BRCA2-201ENST00000380152 SYNDIG1Q9H7V2 258 aa4.1□□□□□ -1.75
BRCA2-201ENST00000380152 FAIMQ9NVQ4 179 aa4.1□□□□□ -1.75
BRCA2-201ENST00000380152 C1orf109Q9NX04 203 aa4.1□□□□□ -1.75
BRCA2-201ENST00000380152 OSER1Q9NX31 292 aa4.1□□□□□ -1.75
BRCA2-201ENST00000380152 TVP23BQ9NYZ1 205 aa4.1□□□□□ -1.75
BRCA2-201ENST00000380152 OXTRP30559 389 aa4.1□□□□□ -1.75
BRCA2-201ENST00000380152 AVPR1BP47901 424 aa4.1□□□□□ -1.75
BRCA2-201ENST00000380152 HNMTP50135 292 aa4.1□□□□□ -1.75
BRCA2-201ENST00000380152 CLCN2P51788 898 aa4.1□□□□□ -1.75
BRCA2-201ENST00000380152 XKP51811 444 aa4.1□□□□□ -1.75
BRCA2-201ENST00000380152 RPA4Q13156 261 aa4.1□□□□□ -1.75
BRCA2-201ENST00000380152 C4orf46Q504U0 113 aa4.1□□□□□ -1.75
BRCA2-201ENST00000380152 SPANXN4Q5MJ08 99 aa4.1□□□□□ -1.75
BRCA2-201ENST00000380152 C1orf220Q5T0J3 134 aa4.1□□□□□ -1.75
BRCA2-201ENST00000380152 ARMC6Q6NXE6 501 aa4.1□□□□□ -1.75
BRCA2-201ENST00000380152 PLEKHG7Q6ZR37 379 aa4.1□□□□□ -1.75
BRCA2-201ENST00000380152 CCDC28AQ8IWP9 274 aa4.1□□□□□ -1.75
BRCA2-201ENST00000380152 ZBTB2Q8N680 514 aa4.1□□□□□ -1.75
BRCA2-201ENST00000380152 RASSF5Q8WWW0 418 aa4.1□□□□□ -1.75
BRCA2-201ENST00000380152 SNX27Q96L92 541 aa4.1□□□□□ -1.75
BRCA2-201ENST00000380152 FIZ1Q96SL8 496 aa4.1□□□□□ -1.75
BRCA2-201ENST00000380152 OR51V1Q9H2C8 321 aa4.1□□□□□ -1.75
BRCA2-201ENST00000380152 BRD7Q9NPI1 651 aa4.1□□□□□ -1.75
BRCA2-201ENST00000380152 CCDC177Q9NQR7 707 aaPredicted RBP4.1□□□□□ -1.75
BRCA2-201ENST00000380152 RDH8Q9NYR8 311 aa4.1□□□□□ -1.75
BRCA2-201ENST00000380152 MKLN1Q9UL63 735 aa4.1□□□□□ -1.75
BRCA2-201ENST00000380152 SZT2Q5T011 3432 aa4.1□□□□□ -1.75
BRCA2-201ENST00000380152 H7C0S8 307 aa4.1□□□□□ -1.75
BRCA2-201ENST00000380152 KERAO60938 352 aa4.1□□□□□ -1.75
BRCA2-201ENST00000380152 ATG13O75143 517 aa4.1□□□□□ -1.75
BRCA2-201ENST00000380152 TRIM3O75382 744 aaPredicted RBP4.1□□□□□ -1.75
BRCA2-201ENST00000380152 AKR1A1P14550 325 aa4.1□□□□□ -1.75
BRCA2-201ENST00000380152 MAN2A2P49641 1150 aa4.1□□□□□ -1.75
BRCA2-201ENST00000380152 FAM92BQ6ZTR7 304 aa4.1□□□□□ -1.75
BRCA2-201ENST00000380152 SYVN1Q86TM6 617 aa4.1□□□□□ -1.75
Retrieved 100 of 20,778 RNA–protein pairs in 26.7 ms