RNA–Protein interactions for RNA: ENST00000376259.6

TNFRSF1B-201, Transcript of TNF receptor superfamily member 1B, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TNFRSF1B, Length 3,683 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFRSF1B-201ENST00000376259 CTSL3PQ5NE16 218 aa14.03□□□□□ -0.16
TNFRSF1B-201ENST00000376259 IER5LQ5T953 404 aa14.03□□□□□ -0.16
TNFRSF1B-201ENST00000376259 DCDC5Q6ZRR9 648 aa14.03□□□□□ -0.16
TNFRSF1B-201ENST00000376259 ZNF513Q8N8E2 541 aaPredicted RBP14.03□□□□□ -0.16
TNFRSF1B-201ENST00000376259 CAPN10Q9HC96 672 aa14.03□□□□□ -0.16
TNFRSF1B-201ENST00000376259 MIEF1Q9NQG6 463 aa14.03□□□□□ -0.16
TNFRSF1B-201ENST00000376259 CFAP97Q9P2B7 532 aa14.03□□□□□ -0.16
TNFRSF1B-201ENST00000376259 CEP290O15078 2479 aa14.03□□□□□ -0.16
TNFRSF1B-201ENST00000376259 MANBAO00462 879 aa14.03□□□□□ -0.16
TNFRSF1B-201ENST00000376259 E2F3O00716 465 aa14.03□□□□□ -0.16
TNFRSF1B-201ENST00000376259 SUV39H1O43463 412 aa14.03□□□□□ -0.16
TNFRSF1B-201ENST00000376259 FABP3P05413 133 aa14.03□□□□□ -0.16
TNFRSF1B-201ENST00000376259 HTR7P34969 479 aa14.03□□□□□ -0.16
TNFRSF1B-201ENST00000376259 SLC26A3P40879 764 aa14.03□□□□□ -0.16
TNFRSF1B-201ENST00000376259 ADGRF1Q5T601 910 aa14.03□□□□□ -0.16
TNFRSF1B-201ENST00000376259 HACD2Q6Y1H2 254 aa14.03□□□□□ -0.16
TNFRSF1B-201ENST00000376259 CMTM8Q8IZV2 173 aa14.03□□□□□ -0.16
TNFRSF1B-201ENST00000376259 MFSD2AQ8NA29 543 aa14.03□□□□□ -0.16
TNFRSF1B-201ENST00000376259 KCNJ9Q92806 393 aa14.03□□□□□ -0.16
TNFRSF1B-201ENST00000376259 TSPAN18Q96SJ8 248 aa14.03□□□□□ -0.16
TNFRSF1B-201ENST00000376259 ZNF382Q96SR6 550 aa14.03□□□□□ -0.16
TNFRSF1B-201ENST00000376259 CACNA1CQ13936 2221 aa14.03□□□□□ -0.16
TNFRSF1B-201ENST00000376259 MATN4O95460 622 aa14.03□□□□□ -0.16
TNFRSF1B-201ENST00000376259 INO80DQ53TQ3 878 aaPredicted RBP14.03□□□□□ -0.16
TNFRSF1B-201ENST00000376259 DEPDC1Q5TB30 811 aa14.03□□□□□ -0.16
TNFRSF1B-201ENST00000376259 APCDD1Q8J025 514 aa14.03□□□□□ -0.16
TNFRSF1B-201ENST00000376259 OR5K1Q8NHB7 308 aa14.03□□□□□ -0.16
TNFRSF1B-201ENST00000376259 UBASH3BQ8TF42 649 aa14.03□□□□□ -0.16
TNFRSF1B-201ENST00000376259 NELL1Q92832 810 aa14.03□□□□□ -0.16
TNFRSF1B-201ENST00000376259 ITFG2Q969R8 447 aa14.03□□□□□ -0.16
TNFRSF1B-201ENST00000376259 OTUB1Q96FW1 271 aaPredicted RBP14.03□□□□□ -0.16
TNFRSF1B-201ENST00000376259 FUBP3Q96I24 572 aaKnown RBP eCLIP14.03□□□□□ -0.16
TNFRSF1B-201ENST00000376259 ATP13A3Q9H7F0 1226 aa14.03□□□□□ -0.16
TNFRSF1B-201ENST00000376259 ADPRHL2Q9NX46 363 aa14.03□□□□□ -0.16
TNFRSF1B-201ENST00000376259 TOR4AQ9NXH8 423 aa14.03□□□□□ -0.16
TNFRSF1B-201ENST00000376259 F5P12259 2224 aa14.02□□□□□ -0.16
TNFRSF1B-201ENST00000376259 SCELO95171 688 aa14.02□□□□□ -0.16
TNFRSF1B-201ENST00000376259 APOL3O95236 402 aa14.02□□□□□ -0.16
TNFRSF1B-201ENST00000376259 DNTTP04053 509 aa14.02□□□□□ -0.16
TNFRSF1B-201ENST00000376259 ANXA4P09525 319 aaPredicted RBP14.02□□□□□ -0.16
TNFRSF1B-201ENST00000376259 CYP2A7P20853 494 aa14.02□□□□□ -0.16
TNFRSF1B-201ENST00000376259 HTR1BP28222 390 aa14.02□□□□□ -0.16
TNFRSF1B-201ENST00000376259 NNMTP40261 264 aa14.02□□□□□ -0.16
TNFRSF1B-201ENST00000376259 PREPP48147 710 aa14.02□□□□□ -0.16
TNFRSF1B-201ENST00000376259 PDCD4Q53EL6 469 aaKnown RBP14.02□□□□□ -0.16
TNFRSF1B-201ENST00000376259 SPANXN2Q5MJ10 180 aa14.02□□□□□ -0.16
TNFRSF1B-201ENST00000376259 TYW3Q6IPR3 259 aaKnown RBP14.02□□□□□ -0.16
TNFRSF1B-201ENST00000376259 FAM217AQ8IXS0 508 aa14.02□□□□□ -0.16
TNFRSF1B-201ENST00000376259 ZBTB8BQ8NAP8 495 aaPredicted RBP14.02□□□□□ -0.16
TNFRSF1B-201ENST00000376259 FOPNLQ96NB1 174 aa14.02□□□□□ -0.16
TNFRSF1B-201ENST00000376259 ZNF583Q96ND8 569 aa14.02□□□□□ -0.16
TNFRSF1B-201ENST00000376259 SGK2Q9HBY8 427 aa14.02□□□□□ -0.16
TNFRSF1B-201ENST00000376259 RBBP6Q7Z6E9 1792 aaKnown RBP14.02□□□□□ -0.16
TNFRSF1B-201ENST00000376259 ANKDD1BA6NHY2 528 aa14.02□□□□□ -0.17
TNFRSF1B-201ENST00000376259 CKBP12277 381 aa14.02□□□□□ -0.17
TNFRSF1B-201ENST00000376259 ZNF12P17014 697 aa14.02□□□□□ -0.17
TNFRSF1B-201ENST00000376259 HOXD9P28356 352 aaPredicted RBP14.02□□□□□ -0.17
TNFRSF1B-201ENST00000376259 GALNT1Q10472 559 aaPredicted RBP14.02□□□□□ -0.17
TNFRSF1B-201ENST00000376259 OR2T5Q6IEZ7 315 aa14.02□□□□□ -0.17
TNFRSF1B-201ENST00000376259 SVOPQ8N4V2 548 aa14.02□□□□□ -0.17
TNFRSF1B-201ENST00000376259 OR2T29Q8NH02 315 aa14.02□□□□□ -0.17
TNFRSF1B-201ENST00000376259 APIPQ96GX9 242 aa14.02□□□□□ -0.17
TNFRSF1B-201ENST00000376259 BARD1Q99728 777 aaKnown RBP14.02□□□□□ -0.17
TNFRSF1B-201ENST00000376259 CORO1BQ9BR76 489 aa14.02□□□□□ -0.17
TNFRSF1B-201ENST00000376259 DCSTAMPQ9H295 470 aa14.02□□□□□ -0.17
TNFRSF1B-201ENST00000376259 MTG2Q9H4K7 406 aa14.02□□□□□ -0.17
TNFRSF1B-201ENST00000376259 DHRS7Q9Y394 339 aa14.02□□□□□ -0.17
TNFRSF1B-201ENST00000376259 PRKAB1Q9Y478 270 aa14.02□□□□□ -0.17
TNFRSF1B-201ENST00000376259 OR6C75A6NL08 312 aa14.02□□□□□ -0.17
TNFRSF1B-201ENST00000376259 MAGEB17A8MXT2 336 aa14.02□□□□□ -0.17
TNFRSF1B-201ENST00000376259 STX16O14662 325 aa14.02□□□□□ -0.17
TNFRSF1B-201ENST00000376259 SEPT4O43236 478 aa14.02□□□□□ -0.17
TNFRSF1B-201ENST00000376259 KLKB1P03952 638 aa14.02□□□□□ -0.17
TNFRSF1B-201ENST00000376259 IL6P05231 212 aa14.02□□□□□ -0.17
TNFRSF1B-201ENST00000376259 MAPK1P28482 360 aa14.02□□□□□ -0.17
TNFRSF1B-201ENST00000376259 RFX3P48380 749 aa14.02□□□□□ -0.17
TNFRSF1B-201ENST00000376259 ARMC4Q5T2S8 1044 aa14.02□□□□□ -0.17
TNFRSF1B-201ENST00000376259 RSPO2Q6UXX9 243 aaPredicted RBP14.02□□□□□ -0.17
TNFRSF1B-201ENST00000376259 CYP4Z1Q86W10 505 aa14.02□□□□□ -0.17
TNFRSF1B-201ENST00000376259 CACTIN-AS1Q8N1I8 211 aa14.02□□□□□ -0.17
TNFRSF1B-201ENST00000376259 TRPV1Q8NER1 839 aa14.02□□□□□ -0.17
TNFRSF1B-201ENST00000376259 TMEM203Q969S6 136 aa14.02□□□□□ -0.17
TNFRSF1B-201ENST00000376259 HSH2DQ96JZ2 352 aa14.02□□□□□ -0.17
TNFRSF1B-201ENST00000376259 BIRC8Q96P09 236 aa14.02□□□□□ -0.17
TNFRSF1B-201ENST00000376259 PRRG3Q9BZD7 231 aa14.02□□□□□ -0.17
TNFRSF1B-201ENST00000376259 ABCB9Q9NP78 766 aa14.02□□□□□ -0.17
TNFRSF1B-201ENST00000376259 ACSL6Q9UKU0 697 aa14.02□□□□□ -0.17
TNFRSF1B-201ENST00000376259 ASPDHA6ND91 283 aa14.01□□□□□ -0.17
TNFRSF1B-201ENST00000376259 M0QZQ0 153 aa14.01□□□□□ -0.17
TNFRSF1B-201ENST00000376259 ASNA1O43681 348 aa14.01□□□□□ -0.17
TNFRSF1B-201ENST00000376259 KRT75O95678 551 aa14.01□□□□□ -0.17
TNFRSF1B-201ENST00000376259 TGFB1P01137 390 aa14.01□□□□□ -0.17
TNFRSF1B-201ENST00000376259 GGT1P19440 569 aa14.01□□□□□ -0.17
TNFRSF1B-201ENST00000376259 CRHBPP24387 322 aa14.01□□□□□ -0.17
TNFRSF1B-201ENST00000376259 DNAJB1P25685 340 aa14.01□□□□□ -0.17
TNFRSF1B-201ENST00000376259 RRM2P31350 389 aa14.01□□□□□ -0.17
TNFRSF1B-201ENST00000376259 ALDH6A1Q02252 535 aaKnown RBP14.01□□□□□ -0.17
TNFRSF1B-201ENST00000376259 RUNX1T1Q06455 604 aa14.01□□□□□ -0.17
TNFRSF1B-201ENST00000376259 SMARCB1Q12824 385 aa14.01□□□□□ -0.17
TNFRSF1B-201ENST00000376259 ACOX1Q15067 660 aa14.01□□□□□ -0.17
Retrieved 100 of 20,778 RNA–protein pairs in 41.8 ms