RNA–Protein interactions for RNA: ENST00000367142.4

NUCKS1-201, Transcript of nuclear casein kinase and cyclin dependent kinase substrate 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NUCKS1, Length 6,496 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUCKS1-201ENST00000367142 BTN3A2P78410 334 aa15.38■□□□□ 0.05
NUCKS1-201ENST00000367142 METTL21CQ5VZV1 264 aa15.38■□□□□ 0.05
NUCKS1-201ENST00000367142 BRAT1Q6PJG6 821 aa15.38■□□□□ 0.05
NUCKS1-201ENST00000367142 ADGRD2Q7Z7M1 963 aa15.38■□□□□ 0.05
NUCKS1-201ENST00000367142 ELAC1Q9H777 363 aaKnown RBP15.38■□□□□ 0.05
NUCKS1-201ENST00000367142 SERTAD3Q9UJW9 196 aa15.38■□□□□ 0.05
NUCKS1-201ENST00000367142 TEX13CA0A0J9YWL9 993 aa15.38■□□□□ 0.05
NUCKS1-201ENST00000367142 CST3P01034 146 aaPredicted RBP15.38■□□□□ 0.05
NUCKS1-201ENST00000367142 RFC2P35250 354 aa15.38■□□□□ 0.05
NUCKS1-201ENST00000367142 OCLNQ16625 522 aa15.38■□□□□ 0.05
NUCKS1-201ENST00000367142 AAK1Q2M2I8 961 aa15.38■□□□□ 0.05
NUCKS1-201ENST00000367142 PAOXQ6QHF9 649 aa15.38■□□□□ 0.05
NUCKS1-201ENST00000367142 ZDHHC21Q8IVQ6 265 aa15.38■□□□□ 0.05
NUCKS1-201ENST00000367142 B3GALT6Q96L58 329 aa15.38■□□□□ 0.05
NUCKS1-201ENST00000367142 OSBPL2Q9H1P3 480 aa15.38■□□□□ 0.05
NUCKS1-201ENST00000367142 RIPK3Q9Y572 518 aa15.38■□□□□ 0.05
NUCKS1-201ENST00000367142 ARL5AQ9Y689 179 aa15.38■□□□□ 0.05
NUCKS1-201ENST00000367142 TRMUO75648 421 aaKnown RBP15.38■□□□□ 0.05
NUCKS1-201ENST00000367142 HMGN1P05114 100 aa15.38■□□□□ 0.05
NUCKS1-201ENST00000367142 TREML1Q86YW5 311 aa15.38■□□□□ 0.05
NUCKS1-201ENST00000367142 SPERTQ8NA61 448 aa15.38■□□□□ 0.05
NUCKS1-201ENST00000367142 KCTD13Q8WZ19 329 aa15.38■□□□□ 0.05
NUCKS1-201ENST00000367142 CPT1BQ92523 772 aa15.38■□□□□ 0.05
NUCKS1-201ENST00000367142 MFSD3Q96ES6 412 aa15.38■□□□□ 0.05
NUCKS1-201ENST00000367142 CENPNQ96H22 339 aaPredicted RBP15.38■□□□□ 0.05
NUCKS1-201ENST00000367142 SP140LQ9H930 580 aa15.38■□□□□ 0.05
NUCKS1-201ENST00000367142 Q9N2J8 555 aa15.38■□□□□ 0.05
NUCKS1-201ENST00000367142 RPL36Q9Y3U8 105 aaKnown RBP15.38■□□□□ 0.05
NUCKS1-201ENST00000367142 BPNT1O95861 308 aa15.38■□□□□ 0.05
NUCKS1-201ENST00000367142 HSD3B2P26439 372 aa15.38■□□□□ 0.05
NUCKS1-201ENST00000367142 CRHR2Q13324 411 aa15.38■□□□□ 0.05
NUCKS1-201ENST00000367142 ZNF234Q14588 700 aa15.38■□□□□ 0.05
NUCKS1-201ENST00000367142 CRTC2Q53ET0 693 aaPredicted RBP15.38■□□□□ 0.05
NUCKS1-201ENST00000367142 ARL13AQ5H913 290 aaPredicted RBP15.38■□□□□ 0.05
NUCKS1-201ENST00000367142 TMEM126BQ8IUX1 230 aa15.38■□□□□ 0.05
NUCKS1-201ENST00000367142 LPIN3Q9BQK8 851 aa15.38■□□□□ 0.05
NUCKS1-201ENST00000367142 TTYH1Q9H313 450 aaPredicted RBP15.38■□□□□ 0.05
NUCKS1-201ENST00000367142 C12orf4Q9NQ89 552 aa15.38■□□□□ 0.05
NUCKS1-201ENST00000367142 NRP1O14786 923 aa15.38■□□□□ 0.05
NUCKS1-201ENST00000367142 AIREO43918 545 aa15.38■□□□□ 0.05
NUCKS1-201ENST00000367142 ARSHQ5FYA8 562 aa15.38■□□□□ 0.05
NUCKS1-201ENST00000367142 GHDCQ8N2G8 530 aa15.38■□□□□ 0.05
NUCKS1-201ENST00000367142 LRRN4CLQ8ND94 238 aa15.38■□□□□ 0.05
NUCKS1-201ENST00000367142 TFB2MQ9H5Q4 396 aaKnown RBP15.38■□□□□ 0.05
NUCKS1-201ENST00000367142 SEC61A2Q9H9S3 476 aa15.38■□□□□ 0.05
NUCKS1-201ENST00000367142 ACSS2Q9NR19 701 aa15.38■□□□□ 0.05
NUCKS1-201ENST00000367142 NCDNQ9UBB6 729 aa15.38■□□□□ 0.05
NUCKS1-201ENST00000367142 ZNF878C9JN71 531 aa15.37■□□□□ 0.05
NUCKS1-201ENST00000367142 SLC33A1O00400 549 aaPredicted RBP15.37■□□□□ 0.05
NUCKS1-201ENST00000367142 AKR1D1P51857 326 aa15.37■□□□□ 0.05
NUCKS1-201ENST00000367142 ZFP69Q49AA0 526 aa15.37■□□□□ 0.05
NUCKS1-201ENST00000367142 NXPE1Q8N323 547 aa15.37■□□□□ 0.05
NUCKS1-201ENST00000367142 HAPLN3Q96S86 360 aa15.37■□□□□ 0.05
NUCKS1-201ENST00000367142 SPATA7Q9P0W8 599 aa15.37■□□□□ 0.05
NUCKS1-201ENST00000367142 FAM237AA0A1B0GTK4 181 aa15.37■□□□□ 0.05
NUCKS1-201ENST00000367142 C5orf51A6NDU8 294 aa15.37■□□□□ 0.05
NUCKS1-201ENST00000367142 MID1O15344 667 aa15.37■□□□□ 0.05
NUCKS1-201ENST00000367142 MSX2P35548 267 aaPredicted RBP15.37■□□□□ 0.05
NUCKS1-201ENST00000367142 APLP1P51693 650 aa15.37■□□□□ 0.05
NUCKS1-201ENST00000367142 NFKB2Q00653 900 aa15.37■□□□□ 0.05
NUCKS1-201ENST00000367142 GPR68Q15743 365 aa15.37■□□□□ 0.05
NUCKS1-201ENST00000367142 P2RY8Q86VZ1 359 aa15.37■□□□□ 0.05
NUCKS1-201ENST00000367142 FAM84AQ96KN4 292 aa15.37■□□□□ 0.05
NUCKS1-201ENST00000367142 INPPL1O15357 1258 aa15.37■□□□□ 0.05
NUCKS1-201ENST00000367142 ERI3O43414 337 aaKnown RBP15.37■□□□□ 0.05
NUCKS1-201ENST00000367142 SYNGR4O95473 234 aa15.37■□□□□ 0.05
NUCKS1-201ENST00000367142 SYN1P17600 705 aa15.37■□□□□ 0.05
NUCKS1-201ENST00000367142 GRK5P34947 590 aa15.37■□□□□ 0.05
NUCKS1-201ENST00000367142 CD47Q08722 323 aa15.37■□□□□ 0.05
NUCKS1-201ENST00000367142 SPIN4Q56A73 249 aa15.37■□□□□ 0.05
NUCKS1-201ENST00000367142 CWF19L1Q69YN2 538 aaKnown RBP15.37■□□□□ 0.05
NUCKS1-201ENST00000367142 UTS2BQ765I0 119 aa15.37■□□□□ 0.05
NUCKS1-201ENST00000367142 CCDC107Q8WV48 283 aa15.37■□□□□ 0.05
NUCKS1-201ENST00000367142 HPS1Q92902 700 aa15.37■□□□□ 0.05
NUCKS1-201ENST00000367142 RFT1Q96AA3 541 aa15.37■□□□□ 0.05
NUCKS1-201ENST00000367142 ADAD1Q96M93 576 aaKnown RBP15.37■□□□□ 0.05
NUCKS1-201ENST00000367142 SYT17Q9BSW7 474 aa15.37■□□□□ 0.05
NUCKS1-201ENST00000367142 ZCCHC3Q9NUD5 404 aaKnown RBP15.37■□□□□ 0.05
NUCKS1-201ENST00000367142 FBXL12Q9NXK8 326 aa15.37■□□□□ 0.05
NUCKS1-201ENST00000367142 DEPDC5O75140 1603 aa15.37■□□□□ 0.05
NUCKS1-201ENST00000367142 MXD1Q05195 221 aa15.37■□□□□ 0.05
NUCKS1-201ENST00000367142 SLC5A9Q2M3M2 681 aa15.37■□□□□ 0.05
NUCKS1-201ENST00000367142 ALG10Q5BKT4 473 aa15.37■□□□□ 0.05
NUCKS1-201ENST00000367142 LPCAT4Q643R3 524 aa15.37■□□□□ 0.05
NUCKS1-201ENST00000367142 ZNF227Q86WZ6 799 aa15.37■□□□□ 0.05
NUCKS1-201ENST00000367142 HTRA1Q92743 480 aa15.37■□□□□ 0.05
NUCKS1-201ENST00000367142 CSTF2TQ9H0L4 616 aaKnown RBP eCLIP15.37■□□□□ 0.051e-6■■■□□ 16.7
NUCKS1-201ENST00000367142 A8MUI8 341 aa15.37■□□□□ 0.05
NUCKS1-201ENST00000367142 VEGFDO43915 354 aa15.37■□□□□ 0.05
NUCKS1-201ENST00000367142 PIK3CBP42338 1070 aa15.37■□□□□ 0.05
NUCKS1-201ENST00000367142 PTGES2Q9H7Z7 377 aa15.37■□□□□ 0.05
NUCKS1-201ENST00000367142 MARCH7Q9H992 704 aa15.37■□□□□ 0.05
NUCKS1-201ENST00000367142 CNTN6Q9UQ52 1028 aa15.37■□□□□ 0.05
NUCKS1-201ENST00000367142 PRAMEF33A0A0G2JMD5 474 aa15.37■□□□□ 0.05
NUCKS1-201ENST00000367142 PRAMEF10O60809 474 aa15.37■□□□□ 0.05
NUCKS1-201ENST00000367142 TSPAN9O75954 239 aa15.37■□□□□ 0.05
NUCKS1-201ENST00000367142 HOXB2P14652 356 aa15.37■□□□□ 0.05
NUCKS1-201ENST00000367142 ITIH1P19827 911 aa15.37■□□□□ 0.05
NUCKS1-201ENST00000367142 EFNA1P20827 205 aaPredicted RBP15.37■□□□□ 0.05
NUCKS1-201ENST00000367142 DCKP27707 260 aa15.37■□□□□ 0.05
Retrieved 100 of 20,778 RNA–protein pairs in 20.5 ms