RNA–Protein interactions for RNA: ENST00000361138.6

SMC5-201, Transcript of structural maintenance of chromosomes 5, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SMC5, Length 5,980 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC5-201ENST00000361138 RANBP9Q96S59 729 aa13.65□□□□□ -0.22
SMC5-201ENST00000361138 MAPKAP1Q9BPZ7 522 aa13.65□□□□□ -0.22
SMC5-201ENST00000361138 BCL7BQ9BQE9 202 aa13.65□□□□□ -0.22
SMC5-201ENST00000361138 HTATIP2Q9BUP3 242 aa13.65□□□□□ -0.22
SMC5-201ENST00000361138 SLC1A7O00341 560 aa13.65□□□□□ -0.22
SMC5-201ENST00000361138 STX16O14662 325 aa13.65□□□□□ -0.22
SMC5-201ENST00000361138 C8GP07360 202 aa13.65□□□□□ -0.22
SMC5-201ENST00000361138 PRPS1L1P21108 318 aa13.65□□□□□ -0.22
SMC5-201ENST00000361138 RPL4P36578 427 aaKnown RBP13.65□□□□□ -0.22
SMC5-201ENST00000361138 PPP5CP53041 499 aa13.65□□□□□ -0.22
SMC5-201ENST00000361138 ADAM15Q13444 863 aa13.65□□□□□ -0.22
SMC5-201ENST00000361138 CES5AQ6NT32 575 aa13.65□□□□□ -0.22
SMC5-201ENST00000361138 OR13J1Q8NGT2 312 aa13.65□□□□□ -0.22
SMC5-201ENST00000361138 SLC29A1Q99808 456 aa13.65□□□□□ -0.22
SMC5-201ENST00000361138 TTYH2Q9BSA4 534 aa13.65□□□□□ -0.22
SMC5-201ENST00000361138 PCDHGC4Q9Y5F7 938 aa13.65□□□□□ -0.22
SMC5-201ENST00000361138 ENPP3O14638 875 aa13.65□□□□□ -0.22
SMC5-201ENST00000361138 SLC5A2P31639 672 aa13.65□□□□□ -0.22
SMC5-201ENST00000361138 CCBE1Q6UXH8 406 aaPredicted RBP13.65□□□□□ -0.22
SMC5-201ENST00000361138 ASB18Q6ZVZ8 466 aa13.65□□□□□ -0.22
SMC5-201ENST00000361138 CRYBG2Q8N1P7 616 aa13.65□□□□□ -0.22
SMC5-201ENST00000361138 PCSK9Q8NBP7 692 aaKnown RBP13.65□□□□□ -0.22
SMC5-201ENST00000361138 GALNT6Q8NCL4 622 aa13.65□□□□□ -0.22
SMC5-201ENST00000361138 POPDC3Q9HBV1 291 aa13.65□□□□□ -0.22
SMC5-201ENST00000361138 SMURF1Q9HCE7 757 aa13.65□□□□□ -0.22
SMC5-201ENST00000361138 CPNE5Q9HCH3 593 aa13.65□□□□□ -0.22
SMC5-201ENST00000361138 MAT2BQ9NZL9 334 aa13.65□□□□□ -0.22
SMC5-201ENST00000361138 CAPN15O75808 1086 aa13.65□□□□□ -0.22
SMC5-201ENST00000361138 HLA-DQA2P01906 255 aa13.65□□□□□ -0.22
SMC5-201ENST00000361138 STOMP27105 288 aa13.65□□□□□ -0.22
SMC5-201ENST00000361138 CDH4P55283 916 aa13.65□□□□□ -0.22
SMC5-201ENST00000361138 RAPSNQ13702 412 aa13.65□□□□□ -0.22
SMC5-201ENST00000361138 OR4F3Q6IEY1 312 aa13.65□□□□□ -0.22
SMC5-201ENST00000361138 PNCKQ6P2M8 343 aa13.65□□□□□ -0.22
SMC5-201ENST00000361138 SLC38A4Q969I6 547 aa13.65□□□□□ -0.22
SMC5-201ENST00000361138 MCMBPQ9BTE3 642 aa13.65□□□□□ -0.22
SMC5-201ENST00000361138 MAGEH1Q9H213 219 aa13.65□□□□□ -0.22
SMC5-201ENST00000361138 PAQR5Q9NXK6 330 aaPredicted RBP13.65□□□□□ -0.22
SMC5-201ENST00000361138 MYH13Q9UKX3 1938 aa13.65□□□□□ -0.22
SMC5-201ENST00000361138 IQCF5A8MTL0 148 aa13.64□□□□□ -0.23
SMC5-201ENST00000361138 GRID2O43424 1007 aa13.64□□□□□ -0.23
SMC5-201ENST00000361138 SLC6A4P31645 630 aa13.64□□□□□ -0.23
SMC5-201ENST00000361138 MAPK9P45984 424 aa13.64□□□□□ -0.23
SMC5-201ENST00000361138 PLA2G16P53816 162 aa13.64□□□□□ -0.23
SMC5-201ENST00000361138 CYP4V2Q6ZWL3 525 aaPredicted RBP13.64□□□□□ -0.23
SMC5-201ENST00000361138 NDNFQ8TB73 568 aa13.64□□□□□ -0.23
SMC5-201ENST00000361138 TFAP2CQ92754 450 aa13.64□□□□□ -0.23
SMC5-201ENST00000361138 TMEM80Q96HE8 168 aa13.64□□□□□ -0.23
SMC5-201ENST00000361138 DSN1Q9H410 356 aa13.64□□□□□ -0.23
SMC5-201ENST00000361138 SIX4Q9UIU6 781 aa13.64□□□□□ -0.23
SMC5-201ENST00000361138 HSPB11Q9Y547 144 aa13.64□□□□□ -0.23
SMC5-201ENST00000361138 C12orf71A8MTZ7 269 aa13.64□□□□□ -0.23
SMC5-201ENST00000361138 PTTG1O95997 202 aa13.64□□□□□ -0.23
SMC5-201ENST00000361138 OR4Q2P0C623 313 aa13.64□□□□□ -0.23
SMC5-201ENST00000361138 AKR1A1P14550 325 aa13.64□□□□□ -0.23
SMC5-201ENST00000361138 ELMOD2Q8IZ81 293 aa13.64□□□□□ -0.23
SMC5-201ENST00000361138 OXR1Q8N573 874 aa13.64□□□□□ -0.23
SMC5-201ENST00000361138 TMEM203Q969S6 136 aa13.64□□□□□ -0.23
SMC5-201ENST00000361138 TAS2R9Q9NYW1 312 aa13.64□□□□□ -0.23
SMC5-201ENST00000361138 IRF6O14896 467 aa13.64□□□□□ -0.23
SMC5-201ENST00000361138 ECDO95905 644 aaPredicted RBP13.64□□□□□ -0.23
SMC5-201ENST00000361138 ARL4DP49703 201 aa13.64□□□□□ -0.23
SMC5-201ENST00000361138 ZNF697Q5TEC3 545 aa13.64□□□□□ -0.23
SMC5-201ENST00000361138 HFE2Q6ZVN8 426 aa13.64□□□□□ -0.23
SMC5-201ENST00000361138 PIGXQ8TBF5 258 aa13.64□□□□□ -0.23
SMC5-201ENST00000361138 MLXQ9UH92 298 aa13.64□□□□□ -0.23
SMC5-201ENST00000361138 TPST2O60704 377 aa13.64□□□□□ -0.23
SMC5-201ENST00000361138 ERAL1O75616 437 aaKnown RBP13.64□□□□□ -0.23
SMC5-201ENST00000361138 SP2Q02086 613 aa13.64□□□□□ -0.23
SMC5-201ENST00000361138 ZNF33AQ06730 810 aa13.64□□□□□ -0.23
SMC5-201ENST00000361138 TAF10Q12962 218 aa13.64□□□□□ -0.23
SMC5-201ENST00000361138 RNF44Q7L0R7 432 aa13.64□□□□□ -0.23
SMC5-201ENST00000361138 ZNF486Q96H40 463 aaPredicted RBP13.64□□□□□ -0.23
SMC5-201ENST00000361138 TRPS1Q9UHF7 1281 aa13.64□□□□□ -0.23
SMC5-201ENST00000361138 PRKAB1Q9Y478 270 aa13.64□□□□□ -0.23
SMC5-201ENST00000361138 SOWAHBA6NEL2 793 aa13.64□□□□□ -0.23
SMC5-201ENST00000361138 PITPNM1O00562 1244 aa13.64□□□□□ -0.23
SMC5-201ENST00000361138 ATE1O95260 518 aa13.64□□□□□ -0.23
SMC5-201ENST00000361138 C1RP00736 705 aa13.64□□□□□ -0.23
SMC5-201ENST00000361138 CPOXP36551 454 aa13.64□□□□□ -0.23
SMC5-201ENST00000361138 SLC9A3P48764 834 aa13.64□□□□□ -0.23
SMC5-201ENST00000361138 ABHD18Q0P651 414 aa13.64□□□□□ -0.23
SMC5-201ENST00000361138 NAE1Q13564 534 aa13.64□□□□□ -0.23
SMC5-201ENST00000361138 UNC50Q53HI1 259 aa13.64□□□□□ -0.23
SMC5-201ENST00000361138 BLOC1S3Q6QNY0 202 aa13.64□□□□□ -0.23
SMC5-201ENST00000361138 OR7D4Q8NG98 312 aa13.64□□□□□ -0.23
SMC5-201ENST00000361138 GEMIN6Q8WXD5 167 aaKnown RBP13.64□□□□□ -0.23
SMC5-201ENST00000361138 IL4I1Q96RQ9 567 aa13.64□□□□□ -0.23
SMC5-201ENST00000361138 TIGARQ9NQ88 270 aa13.64□□□□□ -0.23
SMC5-201ENST00000361138 FLRT1Q9NZU1 646 aa13.64□□□□□ -0.23
SMC5-201ENST00000361138 RIMKLBQ9ULI2 386 aa13.64□□□□□ -0.23
SMC5-201ENST00000361138 B3GNT3Q9Y2A9 372 aa13.64□□□□□ -0.23
SMC5-201ENST00000361138 PTGDR2Q9Y5Y4 395 aa13.64□□□□□ -0.23
SMC5-201ENST00000361138 PCDH8O95206 1070 aa13.63□□□□□ -0.23
SMC5-201ENST00000361138 MT-ND2P03891 347 aa13.63□□□□□ -0.23
SMC5-201ENST00000361138 SIAH1Q8IUQ4 282 aa13.63□□□□□ -0.23
SMC5-201ENST00000361138 KLHL36Q8N4N3 616 aa13.63□□□□□ -0.23
SMC5-201ENST00000361138 XAGE5Q8WWM1 108 aa13.63□□□□□ -0.23
SMC5-201ENST00000361138 CDCA5Q96FF9 252 aa13.63□□□□□ -0.23
SMC5-201ENST00000361138 POLR2J3Q9H1A7 115 aaKnown RBP13.63□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 29 ms