RNA–Protein interactions for RNA: ENST00000358278.7

TPM1-206, Transcript of tropomyosin 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene TPM1, Length 1,717 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1-206ENST00000358278 SULT1C3Q6IMI6 304 aa14.75□□□□□ -0.05
TPM1-206ENST00000358278 IRGCQ6NXR0 463 aa14.75□□□□□ -0.05
TPM1-206ENST00000358278 ADGRF3Q8IZF5 1079 aa14.75□□□□□ -0.05
TPM1-206ENST00000358278 FBXO39Q8N4B4 442 aa14.75□□□□□ -0.05
TPM1-206ENST00000358278 TCP10LQ8TDR4 215 aa14.75□□□□□ -0.05
TPM1-206ENST00000358278 RHBDF1Q96CC6 855 aa14.75□□□□□ -0.05
TPM1-206ENST00000358278 C12orf65Q9H3J6 166 aaKnown RBP14.75□□□□□ -0.05
TPM1-206ENST00000358278 CNOT10Q9H9A5 744 aaKnown RBP14.75□□□□□ -0.05
TPM1-206ENST00000358278 CCDC177Q9NQR7 707 aaPredicted RBP14.75□□□□□ -0.05
TPM1-206ENST00000358278 OGFRQ9NZT2 677 aa14.75□□□□□ -0.05
TPM1-206ENST00000358278 EMCNQ9ULC0 261 aa14.75□□□□□ -0.05
TPM1-206ENST00000358278 PLLPQ9Y342 182 aa14.75□□□□□ -0.05
TPM1-206ENST00000358278 COL27A1Q8IZC6 1860 aaPredicted RBP14.75□□□□□ -0.05
TPM1-206ENST00000358278 KIF26BQ2KJY2 2108 aa14.75□□□□□ -0.05
TPM1-206ENST00000358278 SPAARA0A1B0GVQ0 90 aa14.75□□□□□ -0.05
TPM1-206ENST00000358278 C2orf74A8MZ97 194 aa14.75□□□□□ -0.05
TPM1-206ENST00000358278 ISM1B1AKI9 464 aa14.75□□□□□ -0.05
TPM1-206ENST00000358278 HMGB1P1B2RPK0 211 aaPredicted RBP14.75□□□□□ -0.05
TPM1-206ENST00000358278 BTN3A3O00478 584 aa14.75□□□□□ -0.05
TPM1-206ENST00000358278 TYROBPO43914 113 aa14.75□□□□□ -0.05
TPM1-206ENST00000358278 PLIN3O60664 434 aa14.75□□□□□ -0.05
TPM1-206ENST00000358278 PROCP04070 461 aa14.75□□□□□ -0.05
TPM1-206ENST00000358278 CEACAM1P13688 526 aa14.75□□□□□ -0.05
TPM1-206ENST00000358278 MTHFD2P13995 350 aa14.75□□□□□ -0.05
TPM1-206ENST00000358278 CD1CP29017 333 aa14.75□□□□□ -0.05
TPM1-206ENST00000358278 RPA3P35244 121 aaPredicted RBP14.75□□□□□ -0.05
TPM1-206ENST00000358278 SIM1P81133 766 aaPredicted RBP14.75□□□□□ -0.05
TPM1-206ENST00000358278 NAE1Q13564 534 aa14.75□□□□□ -0.05
TPM1-206ENST00000358278 SPIDRQ14159 915 aa14.75□□□□□ -0.05
TPM1-206ENST00000358278 PFKFB4Q16877 469 aa14.75□□□□□ -0.05
TPM1-206ENST00000358278 THEMIS2Q5TEJ8 643 aa14.75□□□□□ -0.05
TPM1-206ENST00000358278 SUSD1Q6UWL2 747 aa14.75□□□□□ -0.05
TPM1-206ENST00000358278 USP53Q70EK8 1073 aa14.75□□□□□ -0.05
TPM1-206ENST00000358278 WDR48Q8TAF3 677 aa14.75□□□□□ -0.05
TPM1-206ENST00000358278 HMGCLL1Q8TB92 370 aa14.75□□□□□ -0.05
TPM1-206ENST00000358278 SMPDL3AQ92484 453 aa14.75□□□□□ -0.05
TPM1-206ENST00000358278 FAM111AQ96PZ2 611 aa14.75□□□□□ -0.05
TPM1-206ENST00000358278 GFM1Q96RP9 751 aaKnown RBP14.75□□□□□ -0.05
TPM1-206ENST00000358278 MID2Q9UJV3 735 aa14.75□□□□□ -0.05
TPM1-206ENST00000358278 TMCO1Q9UM00 188 aa14.75□□□□□ -0.05
TPM1-206ENST00000358278 PCDHGA1Q9Y5H4 931 aa14.75□□□□□ -0.05
TPM1-206ENST00000358278 KNTC1P50748 2209 aa14.74□□□□□ -0.05
TPM1-206ENST00000358278 PTPRBP23467 1997 aa14.74□□□□□ -0.05
TPM1-206ENST00000358278 A0A1W2PQM1 296 aa14.74□□□□□ -0.05
TPM1-206ENST00000358278 E7ENX8 843 aa14.74□□□□□ -0.05
TPM1-206ENST00000358278 CASC3O15234 703 aaKnown RBP14.74□□□□□ -0.05
TPM1-206ENST00000358278 CPNE6O95741 557 aa14.74□□□□□ -0.05
TPM1-206ENST00000358278 MYL2P10916 166 aa14.74□□□□□ -0.05
TPM1-206ENST00000358278 CSF2RBP32927 897 aa14.74□□□□□ -0.05
TPM1-206ENST00000358278 ALDH18A1P54886 795 aaKnown RBP14.74□□□□□ -0.05
TPM1-206ENST00000358278 TAP2Q03519 686 aa14.74□□□□□ -0.05
TPM1-206ENST00000358278 GPS2Q13227 327 aa14.74□□□□□ -0.05
TPM1-206ENST00000358278 KIR2DS3Q14952 304 aa14.74□□□□□ -0.05
TPM1-206ENST00000358278 HSP90B2PQ58FF3 399 aa14.74□□□□□ -0.05
TPM1-206ENST00000358278 FBXO48Q5FWF7 155 aa14.74□□□□□ -0.05
TPM1-206ENST00000358278 CAPN13Q6MZZ7 669 aaPredicted RBP14.74□□□□□ -0.05
TPM1-206ENST00000358278 PLXDC1Q8IUK5 500 aa14.74□□□□□ -0.05
TPM1-206ENST00000358278 ARMC2Q8NEN0 867 aa14.74□□□□□ -0.05
TPM1-206ENST00000358278 SLC22A18Q96BI1 424 aa14.74□□□□□ -0.05
TPM1-206ENST00000358278 PYCR2Q96C36 320 aa14.74□□□□□ -0.05
TPM1-206ENST00000358278 PHF21BQ96EK2 531 aa14.74□□□□□ -0.05
TPM1-206ENST00000358278 RTKNQ9BST9 563 aa14.74□□□□□ -0.05
TPM1-206ENST00000358278 TOR4AQ9NXH8 423 aa14.74□□□□□ -0.05
TPM1-206ENST00000358278 SPHK1Q9NYA1 384 aa14.74□□□□□ -0.05
TPM1-206ENST00000358278 ACTR10Q9NZ32 417 aa14.74□□□□□ -0.05
TPM1-206ENST00000358278 SLC17A7Q9P2U7 560 aa14.74□□□□□ -0.05
TPM1-206ENST00000358278 ATXN7L1Q9ULK2 861 aaPredicted RBP14.74□□□□□ -0.05
TPM1-206ENST00000358278 ENTPD2Q9Y5L3 495 aa14.74□□□□□ -0.05
TPM1-206ENST00000358278 TARM1B6A8C7 271 aa14.73□□□□□ -0.05
TPM1-206ENST00000358278 GIPC1O14908 333 aa14.73□□□□□ -0.05
TPM1-206ENST00000358278 CAPN5O15484 640 aaPredicted RBP14.73□□□□□ -0.05
TPM1-206ENST00000358278 PRPF4O43172 522 aaKnown RBP eCLIP14.73□□□□□ -0.053e-6■■□□□ 14.1
TPM1-206ENST00000358278 IPO13O94829 963 aaKnown RBP14.73□□□□□ -0.05
TPM1-206ENST00000358278 SBK3P0C264 359 aa14.73□□□□□ -0.05
TPM1-206ENST00000358278 FTH1P19P0C7X4 201 aa14.73□□□□□ -0.05
TPM1-206ENST00000358278 CCND1P24385 295 aa14.73□□□□□ -0.05
TPM1-206ENST00000358278 HPDP32754 393 aaPredicted RBP14.73□□□□□ -0.05
TPM1-206ENST00000358278 HSPA7P48741 367 aa14.73□□□□□ -0.05
TPM1-206ENST00000358278 PPP1CAP62136 330 aa14.73□□□□□ -0.05
TPM1-206ENST00000358278 E2F1Q01094 437 aa14.73□□□□□ -0.05
TPM1-206ENST00000358278 C18orf21Q32NC0 220 aaPredicted RBP14.73□□□□□ -0.05
TPM1-206ENST00000358278 PTCHD3Q3KNS1 767 aa14.73□□□□□ -0.05
TPM1-206ENST00000358278 WDR74Q6RFH5 385 aaPredicted RBP14.73□□□□□ -0.05
TPM1-206ENST00000358278 TMEM151AQ8N4L1 468 aa14.73□□□□□ -0.05
TPM1-206ENST00000358278 PTGR2Q8N8N7 351 aaPredicted RBP14.73□□□□□ -0.05
TPM1-206ENST00000358278 OR56A3Q8NH54 315 aa14.73□□□□□ -0.05
TPM1-206ENST00000358278 RDH11Q8TC12 318 aa14.73□□□□□ -0.05
TPM1-206ENST00000358278 ZDHHC12Q96GR4 267 aa14.73□□□□□ -0.05
TPM1-206ENST00000358278 TGM7Q96PF1 710 aa14.73□□□□□ -0.05
TPM1-206ENST00000358278 SELENOSQ9BQE4 189 aa14.73□□□□□ -0.05
TPM1-206ENST00000358278 NUDT22Q9BRQ3 303 aa14.73□□□□□ -0.05
TPM1-206ENST00000358278 ACAT2Q9BWD1 397 aa14.73□□□□□ -0.05
TPM1-206ENST00000358278 TAC3Q9UHF0 121 aa14.73□□□□□ -0.05
TPM1-206ENST00000358278 PTBP2Q9UKA9 531 aaKnown RBP14.73□□□□□ -0.05
TPM1-206ENST00000358278 APOBEC2Q9Y235 224 aaKnown RBP14.73□□□□□ -0.05
TPM1-206ENST00000358278 ADAMTS20P59510 1910 aa14.73□□□□□ -0.05
TPM1-206ENST00000358278 SPTBN2O15020 2390 aa14.73□□□□□ -0.05
TPM1-206ENST00000358278 TMEM120BA0PK00 339 aa14.72□□□□□ -0.05
TPM1-206ENST00000358278 D6RAR5 112 aa14.72□□□□□ -0.05
TPM1-206ENST00000358278 TM9SF1O15321 606 aa14.72□□□□□ -0.05
Retrieved 100 of 20,778 RNA–protein pairs in 42.2 ms