RNA–Protein interactions for RNA: ENST00000358207.9

SMARCAL1-202, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a like 1, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene SMARCAL1, Length 3,056 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCAL1-202ENST00000358207 UBASH3BQ8TF42 649 aa9.1□□□□□ -0.95
SMARCAL1-202ENST00000358207 SLC5A11Q8WWX8 675 aa9.1□□□□□ -0.95
SMARCAL1-202ENST00000358207 DCLRE1CQ96SD1 692 aaKnown RBP9.1□□□□□ -0.95
SMARCAL1-202ENST00000358207 CDCA3Q99618 268 aaPredicted RBP9.1□□□□□ -0.95
SMARCAL1-202ENST00000358207 GATA5Q9BWX5 397 aaPredicted RBP9.1□□□□□ -0.95
SMARCAL1-202ENST00000358207 SORBS1Q9BX66 1292 aaKnown RBP9.1□□□□□ -0.95
SMARCAL1-202ENST00000358207 NXF2Q9GZY0 626 aaKnown RBP9.1□□□□□ -0.95
SMARCAL1-202ENST00000358207 ERVK-18Q9QC07 812 aa9.1□□□□□ -0.95
SMARCAL1-202ENST00000358207 TNPO3Q9Y5L0 923 aaKnown RBP9.1□□□□□ -0.95
SMARCAL1-202ENST00000358207 U3KQ87 197 aa9.1□□□□□ -0.95
SMARCAL1-202ENST00000358207 PDCD11Q14690 1871 aaKnown RBP9.1□□□□□ -0.95
SMARCAL1-202ENST00000358207 SH3D21A4FU49 640 aa9.1□□□□□ -0.95
SMARCAL1-202ENST00000358207 F8VP50 259 aa9.1□□□□□ -0.95
SMARCAL1-202ENST00000358207 TNFRSF21O75509 655 aa9.1□□□□□ -0.95
SMARCAL1-202ENST00000358207 SNAPINO95295 136 aa9.1□□□□□ -0.95
SMARCAL1-202ENST00000358207 BRCC3P46736 316 aa9.1□□□□□ -0.95
SMARCAL1-202ENST00000358207 MEOX2P50222 304 aa9.1□□□□□ -0.95
SMARCAL1-202ENST00000358207 CLCN7P51798 805 aa9.1□□□□□ -0.95
SMARCAL1-202ENST00000358207 NOMO3P69849 1222 aa9.1□□□□□ -0.95
SMARCAL1-202ENST00000358207 CYP4F2P78329 520 aa9.1□□□□□ -0.95
SMARCAL1-202ENST00000358207 DEFB103AP81534 67 aa9.1□□□□□ -0.95
SMARCAL1-202ENST00000358207 RELQ04864 619 aaPredicted RBP9.1□□□□□ -0.95
SMARCAL1-202ENST00000358207 CYP4F3Q08477 520 aa9.1□□□□□ -0.95
SMARCAL1-202ENST00000358207 CLCA4Q14CN2 919 aa9.1□□□□□ -0.95
SMARCAL1-202ENST00000358207 GTDC1Q4AE62 458 aa9.1□□□□□ -0.95
SMARCAL1-202ENST00000358207 FBXO47Q5MNV8 452 aa9.1□□□□□ -0.95
SMARCAL1-202ENST00000358207 SEL1L3Q68CR1 1132 aa9.1□□□□□ -0.95
SMARCAL1-202ENST00000358207 ANKRD34AQ69YU3 496 aa9.1□□□□□ -0.95
SMARCAL1-202ENST00000358207 TIGD7Q6NT04 549 aaPredicted RBP9.1□□□□□ -0.95
SMARCAL1-202ENST00000358207 KDELC1Q6UW63 502 aa9.1□□□□□ -0.95
SMARCAL1-202ENST00000358207 ENOSF1Q7L5Y1 443 aa9.1□□□□□ -0.95
SMARCAL1-202ENST00000358207 DEFB128Q7Z7B8 93 aa9.1□□□□□ -0.95
SMARCAL1-202ENST00000358207 PLD6Q8N2A8 252 aaKnown RBP9.1□□□□□ -0.95
SMARCAL1-202ENST00000358207 C9orf62Q8N4C0 152 aa9.1□□□□□ -0.95
SMARCAL1-202ENST00000358207 ATAD1Q8NBU5 361 aa9.1□□□□□ -0.95
SMARCAL1-202ENST00000358207 NETO2Q8NC67 525 aa9.1□□□□□ -0.95
SMARCAL1-202ENST00000358207 OR6M1Q8NGM8 313 aa9.1□□□□□ -0.95
SMARCAL1-202ENST00000358207 OR52N1Q8NH53 320 aa9.1□□□□□ -0.95
SMARCAL1-202ENST00000358207 DNAJA4Q8WW22 397 aaPredicted RBP9.1□□□□□ -0.95
SMARCAL1-202ENST00000358207 REPS1Q96D71 796 aa9.1□□□□□ -0.95
SMARCAL1-202ENST00000358207 WBP1Q96G27 269 aa9.1□□□□□ -0.95
SMARCAL1-202ENST00000358207 SIGLEC10Q96LC7 697 aa9.1□□□□□ -0.95
SMARCAL1-202ENST00000358207 TRNT1Q96Q11 434 aaKnown RBP9.1□□□□□ -0.95
SMARCAL1-202ENST00000358207 ZDHHC2Q9UIJ5 367 aa9.1□□□□□ -0.95
SMARCAL1-202ENST00000358207 MKL2Q9ULH7 1088 aa9.1□□□□□ -0.95
SMARCAL1-202ENST00000358207 PCDHGB1Q9Y5G3 927 aa9.1□□□□□ -0.95
SMARCAL1-202ENST00000358207 SLC22A7Q9Y694 548 aa9.1□□□□□ -0.95
SMARCAL1-202ENST00000358207 CHD9Q3L8U1 2897 aa9.09□□□□□ -0.95
SMARCAL1-202ENST00000358207 A0A1W2PP18 115 aa9.09□□□□□ -0.95
SMARCAL1-202ENST00000358207 TTC24A2A3L6 582 aaPredicted RBP9.09□□□□□ -0.95
SMARCAL1-202ENST00000358207 AQP12BA6NM10 295 aa9.09□□□□□ -0.95
SMARCAL1-202ENST00000358207 G3V2L1 256 aa9.09□□□□□ -0.95
SMARCAL1-202ENST00000358207 WWP2O00308 870 aa9.09□□□□□ -0.95
SMARCAL1-202ENST00000358207 E2F3O00716 465 aa9.09□□□□□ -0.95
SMARCAL1-202ENST00000358207 NME4O00746 187 aa9.09□□□□□ -0.95
SMARCAL1-202ENST00000358207 PTGESO14684 152 aa9.09□□□□□ -0.95
SMARCAL1-202ENST00000358207 PGLSO95336 258 aa9.09□□□□□ -0.95
SMARCAL1-202ENST00000358207 AHSGP02765 367 aa9.09□□□□□ -0.95
SMARCAL1-202ENST00000358207 ITGB1P05556 798 aa9.09□□□□□ -0.95
SMARCAL1-202ENST00000358207 CDK1P06493 297 aa9.09□□□□□ -0.95
SMARCAL1-202ENST00000358207 TFEBP19484 476 aa9.09□□□□□ -0.95
SMARCAL1-202ENST00000358207 PSMA4P25789 261 aaKnown RBP9.09□□□□□ -0.95
SMARCAL1-202ENST00000358207 PSMB9P28065 219 aa9.09□□□□□ -0.95
SMARCAL1-202ENST00000358207 HOXC13P31276 330 aa9.09□□□□□ -0.95
SMARCAL1-202ENST00000358207 RBP5P82980 135 aa9.09□□□□□ -0.95
SMARCAL1-202ENST00000358207 ZNF252P-AS1Q0IIN9 211 aa9.09□□□□□ -0.95
SMARCAL1-202ENST00000358207 IKZF1Q13422 519 aa9.09□□□□□ -0.95
SMARCAL1-202ENST00000358207 CCINQ13939 588 aa9.09□□□□□ -0.95
SMARCAL1-202ENST00000358207 HKDC1Q2TB90 917 aa9.09□□□□□ -0.95
SMARCAL1-202ENST00000358207 FLYWCH1Q4VC44 716 aa9.09□□□□□ -0.95
SMARCAL1-202ENST00000358207 TFDP3Q5H9I0 405 aa9.09□□□□□ -0.95
SMARCAL1-202ENST00000358207 SYT6Q5T7P8 510 aaPredicted RBP9.09□□□□□ -0.95
SMARCAL1-202ENST00000358207 AQP12AQ8IXF9 295 aa9.09□□□□□ -0.95
SMARCAL1-202ENST00000358207 MPP5Q8N3R9 675 aa9.09□□□□□ -0.95
SMARCAL1-202ENST00000358207 TXNDC5Q8NBS9 432 aaKnown RBP9.09□□□□□ -0.95
SMARCAL1-202ENST00000358207 C3orf58Q8NDZ4 430 aa9.09□□□□□ -0.95
SMARCAL1-202ENST00000358207 OR4D10Q8NGI6 311 aa9.09□□□□□ -0.95
SMARCAL1-202ENST00000358207 JOSD2Q8TAC2 188 aa9.09□□□□□ -0.95
SMARCAL1-202ENST00000358207 CLEC4CQ8WTT0 213 aa9.09□□□□□ -0.95
SMARCAL1-202ENST00000358207 PYCR2Q96C36 320 aa9.09□□□□□ -0.95
SMARCAL1-202ENST00000358207 MFSD3Q96ES6 412 aa9.09□□□□□ -0.95
SMARCAL1-202ENST00000358207 GTPBP2Q9BX10 602 aaKnown RBP9.09□□□□□ -0.95
SMARCAL1-202ENST00000358207 FAM50BQ9Y247 325 aa9.09□□□□□ -0.95
SMARCAL1-202ENST00000358207 PRG3Q9Y2Y8 225 aaPredicted RBP9.09□□□□□ -0.95
SMARCAL1-202ENST00000358207 PCDHGB2Q9Y5G2 931 aa9.09□□□□□ -0.95
SMARCAL1-202ENST00000358207 PMS2P1A4D2B8 440 aa9.09□□□□□ -0.95
SMARCAL1-202ENST00000358207 GRXCR2A6NFK2 248 aa9.09□□□□□ -0.95
SMARCAL1-202ENST00000358207 NT5C1B-RDH14C9J2C7 533 aa9.09□□□□□ -0.95
SMARCAL1-202ENST00000358207 H0Y626 953 aa9.09□□□□□ -0.95
SMARCAL1-202ENST00000358207 UGT2B17O75795 530 aa9.09□□□□□ -0.95
SMARCAL1-202ENST00000358207 LRIG2O94898 1065 aa9.09□□□□□ -0.95
SMARCAL1-202ENST00000358207 MED26O95402 600 aa9.09□□□□□ -0.95
SMARCAL1-202ENST00000358207 UGT2B15P54855 530 aa9.09□□□□□ -0.95
SMARCAL1-202ENST00000358207 FLI1Q01543 452 aaPredicted RBP9.09□□□□□ -0.95
SMARCAL1-202ENST00000358207 SMAD1Q15797 465 aaKnown RBP9.09□□□□□ -0.95
SMARCAL1-202ENST00000358207 FAM187BQ17R55 369 aa9.09□□□□□ -0.95
SMARCAL1-202ENST00000358207 WSCD1Q658N2 575 aa9.09□□□□□ -0.95
SMARCAL1-202ENST00000358207 FCRLBQ6BAA4 426 aa9.09□□□□□ -0.95
SMARCAL1-202ENST00000358207 MON1BQ7L1V2 547 aa9.09□□□□□ -0.95
SMARCAL1-202ENST00000358207 LIMS2Q7Z4I7 341 aa9.09□□□□□ -0.95
Retrieved 100 of 20,778 RNA–protein pairs in 45.6 ms