RNA–Protein interactions for RNA: ENST00000357235.5

CDC42SE1-201, Transcript of CDC42 small effector 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CDC42SE1, Length 3,045 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42SE1-201ENST00000357235 ADARB2Q9NS39 739 aaKnown RBP8.06□□□□□ -1.12
CDC42SE1-201ENST00000357235 FARSBQ9NSD9 589 aaKnown RBP8.06□□□□□ -1.12
CDC42SE1-201ENST00000357235 DNAJB9Q9UBS3 223 aa8.06□□□□□ -1.12
CDC42SE1-201ENST00000357235 FKBPLQ9UIM3 349 aa8.06□□□□□ -1.12
CDC42SE1-201ENST00000357235 AKAP8LQ9ULX6 646 aaKnown RBP eCLIP8.06□□□□□ -1.12
CDC42SE1-201ENST00000357235 AP3M1Q9Y2T2 418 aa8.06□□□□□ -1.12
CDC42SE1-201ENST00000357235 PRG3Q9Y2Y8 225 aaPredicted RBP8.06□□□□□ -1.12
CDC42SE1-201ENST00000357235 CCL15-CCL14A0A0B4J2E2 113 aa8.05□□□□□ -1.12
CDC42SE1-201ENST00000357235 ELOVL7A1L3X0 281 aa8.05□□□□□ -1.12
CDC42SE1-201ENST00000357235 OR5K3A6NET4 321 aa8.05□□□□□ -1.12
CDC42SE1-201ENST00000357235 CXCR6O00574 342 aa8.05□□□□□ -1.12
CDC42SE1-201ENST00000357235 NOS1APO75052 506 aaPredicted RBP8.05□□□□□ -1.12
CDC42SE1-201ENST00000357235 SEC22BO75396 215 aa8.05□□□□□ -1.12
CDC42SE1-201ENST00000357235 FGF1P05230 155 aa8.05□□□□□ -1.12
CDC42SE1-201ENST00000357235 GGT1P19440 569 aa8.05□□□□□ -1.12
CDC42SE1-201ENST00000357235 HLA-DPA1P20036 260 aa8.05□□□□□ -1.12
CDC42SE1-201ENST00000357235 HOXC13P31276 330 aa8.05□□□□□ -1.12
CDC42SE1-201ENST00000357235 MC4RP32245 332 aa8.05□□□□□ -1.12
CDC42SE1-201ENST00000357235 OR2B6P58173 313 aa8.05□□□□□ -1.12
CDC42SE1-201ENST00000357235 CYP4F3Q08477 520 aa8.05□□□□□ -1.12
CDC42SE1-201ENST00000357235 CCL15Q16663 113 aa8.05□□□□□ -1.12
CDC42SE1-201ENST00000357235 SYT16Q17RD7 645 aa8.05□□□□□ -1.12
CDC42SE1-201ENST00000357235 TYSND1Q2T9J0 566 aa8.05□□□□□ -1.12
CDC42SE1-201ENST00000357235 ZNF438Q7Z4V0 828 aa8.05□□□□□ -1.12
CDC42SE1-201ENST00000357235 MICU2Q8IYU8 434 aa8.05□□□□□ -1.12
CDC42SE1-201ENST00000357235 UMODL1-AS1Q8N2C9 162 aa8.05□□□□□ -1.12
CDC42SE1-201ENST00000357235 TTC9BQ8N6N2 239 aa8.05□□□□□ -1.12
CDC42SE1-201ENST00000357235 PSD4Q8NDX1 1056 aa8.05□□□□□ -1.12
CDC42SE1-201ENST00000357235 CDC26Q8NHZ8 85 aa8.05□□□□□ -1.12
CDC42SE1-201ENST00000357235 LRRC20Q8TCA0 184 aa8.05□□□□□ -1.12
CDC42SE1-201ENST00000357235 SLC13A3Q8WWT9 602 aa8.05□□□□□ -1.12
CDC42SE1-201ENST00000357235 MYEOVQ96EZ4 313 aa8.05□□□□□ -1.12
CDC42SE1-201ENST00000357235 CCDC120Q96HB5 630 aa8.05□□□□□ -1.12
CDC42SE1-201ENST00000357235 DPY30Q9C005 99 aa8.05□□□□□ -1.12
CDC42SE1-201ENST00000357235 BRINP2Q9C0B6 783 aa8.05□□□□□ -1.12
CDC42SE1-201ENST00000357235 C6orf62Q9GZU0 229 aaPredicted RBP8.05□□□□□ -1.12
CDC42SE1-201ENST00000357235 AP5M1Q9H0R1 490 aa8.05□□□□□ -1.12
CDC42SE1-201ENST00000357235 IPPKQ9H8X2 491 aa8.05□□□□□ -1.12
CDC42SE1-201ENST00000357235 SCPEP1Q9HB40 452 aa8.05□□□□□ -1.12
CDC42SE1-201ENST00000357235 AMBNQ9NP70 447 aa8.05□□□□□ -1.12
CDC42SE1-201ENST00000357235 NPAP1Q9NZP6 1156 aa8.05□□□□□ -1.12
CDC42SE1-201ENST00000357235 ZIM2Q9NZV7 527 aa8.05□□□□□ -1.12
CDC42SE1-201ENST00000357235 MED16Q9Y2X0 877 aa8.05□□□□□ -1.12
CDC42SE1-201ENST00000357235 GIMAP1-GIMAP5A0A087WTJ2 511 aa8.05□□□□□ -1.12
CDC42SE1-201ENST00000357235 LOC285095A0A1B0GVY8 99 aa8.05□□□□□ -1.12
CDC42SE1-201ENST00000357235 C2orf81A6NN90 581 aa8.05□□□□□ -1.12
CDC42SE1-201ENST00000357235 E2F3O00716 465 aa8.05□□□□□ -1.12
CDC42SE1-201ENST00000357235 OR7A10O76100 309 aa8.05□□□□□ -1.12
CDC42SE1-201ENST00000357235 SEMA3DO95025 777 aa8.05□□□□□ -1.12
CDC42SE1-201ENST00000357235 LRATO95237 230 aa8.05□□□□□ -1.12
CDC42SE1-201ENST00000357235 B3GALT4O96024 378 aa8.05□□□□□ -1.12
CDC42SE1-201ENST00000357235 PKMP14618 531 aaKnown RBP8.05□□□□□ -1.12
CDC42SE1-201ENST00000357235 CBX5P45973 191 aa8.05□□□□□ -1.12
CDC42SE1-201ENST00000357235 CLK1P49759 484 aaKnown RBP8.05□□□□□ -1.12
CDC42SE1-201ENST00000357235 TWF1Q12792 350 aa8.05□□□□□ -1.12
CDC42SE1-201ENST00000357235 ADPRMQ3LIE5 342 aa8.05□□□□□ -1.12
CDC42SE1-201ENST00000357235 SETMARQ53H47 684 aaPredicted RBP8.05□□□□□ -1.12
CDC42SE1-201ENST00000357235 ESCO2Q56NI9 601 aa8.05□□□□□ -1.12
CDC42SE1-201ENST00000357235 CATSPEREQ5SY80 951 aa8.05□□□□□ -1.12
CDC42SE1-201ENST00000357235 FAM171BQ6P995 826 aa8.05□□□□□ -1.12
CDC42SE1-201ENST00000357235 TXNDC11Q6PKC3 985 aa8.05□□□□□ -1.12
CDC42SE1-201ENST00000357235 EFL1Q7Z2Z2 1120 aaKnown RBP8.05□□□□□ -1.12
CDC42SE1-201ENST00000357235 P2RY8Q86VZ1 359 aa8.05□□□□□ -1.12
CDC42SE1-201ENST00000357235 SVOPQ8N4V2 548 aa8.05□□□□□ -1.12
CDC42SE1-201ENST00000357235 TP53I13Q8NBR0 393 aaPredicted RBP8.05□□□□□ -1.12
CDC42SE1-201ENST00000357235 ATAD1Q8NBU5 361 aa8.05□□□□□ -1.12
CDC42SE1-201ENST00000357235 IL17RDQ8NFM7 739 aa8.05□□□□□ -1.12
CDC42SE1-201ENST00000357235 FAM120BQ96EK7 910 aaKnown RBP8.05□□□□□ -1.12
CDC42SE1-201ENST00000357235 GIMAP5Q96F15 307 aa8.05□□□□□ -1.12
CDC42SE1-201ENST00000357235 OR52E6Q96RD3 313 aa8.05□□□□□ -1.12
CDC42SE1-201ENST00000357235 C1QTNF7Q9BXJ2 289 aa8.05□□□□□ -1.12
CDC42SE1-201ENST00000357235 GON7Q9BXV9 100 aa8.05□□□□□ -1.12
CDC42SE1-201ENST00000357235 ALOXE3Q9BYJ1 711 aa8.05□□□□□ -1.12
CDC42SE1-201ENST00000357235 ASPSCR1Q9BZE9 553 aa8.05□□□□□ -1.12
CDC42SE1-201ENST00000357235 KCNN2Q9H2S1 579 aa8.05□□□□□ -1.12
CDC42SE1-201ENST00000357235 DSN1Q9H410 356 aa8.05□□□□□ -1.12
CDC42SE1-201ENST00000357235 NSUN3Q9H649 340 aaKnown RBP8.05□□□□□ -1.12
CDC42SE1-201ENST00000357235 CCSER2Q9H7U1 834 aa8.05□□□□□ -1.12
CDC42SE1-201ENST00000357235 TIGARQ9NQ88 270 aa8.05□□□□□ -1.12
CDC42SE1-201ENST00000357235 ZC4H2Q9NQZ6 224 aa8.05□□□□□ -1.12
CDC42SE1-201ENST00000357235 ZNF639Q9UID6 485 aa8.05□□□□□ -1.12
CDC42SE1-201ENST00000357235 HCN4Q9Y3Q4 1203 aa8.05□□□□□ -1.12
CDC42SE1-201ENST00000357235 A0A0G2JMP0 313 aa8.05□□□□□ -1.12
CDC42SE1-201ENST00000357235 A0A0X1KG70 313 aa8.05□□□□□ -1.12
CDC42SE1-201ENST00000357235 FAM92AA1XBS5 289 aa8.05□□□□□ -1.12
CDC42SE1-201ENST00000357235 A8MV72 311 aaPredicted RBP8.05□□□□□ -1.12
CDC42SE1-201ENST00000357235 CBX4O00257 560 aa8.05□□□□□ -1.12
CDC42SE1-201ENST00000357235 PLK4O00444 970 aa8.05□□□□□ -1.12
CDC42SE1-201ENST00000357235 SLC9A3R1O14745 358 aaPredicted RBP8.05□□□□□ -1.12
CDC42SE1-201ENST00000357235 ICAM2P13598 275 aa8.05□□□□□ -1.12
CDC42SE1-201ENST00000357235 IGFBP5P24593 272 aa8.05□□□□□ -1.12
CDC42SE1-201ENST00000357235 CD52P31358 61 aa8.05□□□□□ -1.12
CDC42SE1-201ENST00000357235 DCTP40126 519 aa8.05□□□□□ -1.12
CDC42SE1-201ENST00000357235 RGRP47804 291 aa8.05□□□□□ -1.12
CDC42SE1-201ENST00000357235 SNTA1Q13424 505 aa8.05□□□□□ -1.12
CDC42SE1-201ENST00000357235 PWP1Q13610 501 aa8.05□□□□□ -1.12
CDC42SE1-201ENST00000357235 GNA13Q14344 377 aa8.05□□□□□ -1.12
CDC42SE1-201ENST00000357235 YIF1BQ5BJH7 314 aa8.05□□□□□ -1.12
CDC42SE1-201ENST00000357235 XKR7Q5GH72 579 aa8.05□□□□□ -1.12
CDC42SE1-201ENST00000357235 NECAB2Q7Z6G3 386 aa8.05□□□□□ -1.12
Retrieved 100 of 20,778 RNA–protein pairs in 24.6 ms