RNA–Protein interactions for RNA: ENST00000356805.8

SPTBN1-202, Transcript of spectrin beta, non-erythrocytic 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SPTBN1, Length 8,482 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPTBN1-202ENST00000356805 SYNPOQ8N3V7 929 aa11.28□□□□□ -0.6
SPTBN1-202ENST00000356805 TCEAL3Q969E4 200 aa11.28□□□□□ -0.6
SPTBN1-202ENST00000356805 PHOX2BQ99453 314 aa11.28□□□□□ -0.6
SPTBN1-202ENST00000356805 ZNF717Q9BY31 904 aaPredicted RBP11.28□□□□□ -0.6
SPTBN1-202ENST00000356805 KCNMB3Q9NPA1 279 aa11.28□□□□□ -0.6
SPTBN1-202ENST00000356805 RAI2Q9Y5P3 530 aa11.28□□□□□ -0.6
SPTBN1-202ENST00000356805 ADGRB2O60241 1585 aa11.28□□□□□ -0.6
SPTBN1-202ENST00000356805 FAM155BO75949 473 aa11.28□□□□□ -0.6
SPTBN1-202ENST00000356805 TUBG1P23258 451 aa11.28□□□□□ -0.6
SPTBN1-202ENST00000356805 HSPA7P48741 367 aa11.28□□□□□ -0.6
SPTBN1-202ENST00000356805 MRPS5P82675 430 aaKnown RBP11.28□□□□□ -0.6
SPTBN1-202ENST00000356805 BNIP3Q12983 259 aa11.28□□□□□ -0.6
SPTBN1-202ENST00000356805 PIWIL1Q96J94 861 aaKnown RBP11.28□□□□□ -0.6
SPTBN1-202ENST00000356805 TRPV4Q9HBA0 871 aa11.28□□□□□ -0.6
SPTBN1-202ENST00000356805 CNTNAP1P78357 1384 aa11.28□□□□□ -0.6
SPTBN1-202ENST00000356805 H0YAE9 185 aa11.28□□□□□ -0.6
SPTBN1-202ENST00000356805 PGLSO95336 258 aa11.28□□□□□ -0.6
SPTBN1-202ENST00000356805 NPPAP01160 153 aa11.28□□□□□ -0.6
SPTBN1-202ENST00000356805 MMP8P22894 467 aa11.28□□□□□ -0.6
SPTBN1-202ENST00000356805 MLLT3P42568 568 aaPredicted RBP11.28□□□□□ -0.6
SPTBN1-202ENST00000356805 LSAMPQ13449 338 aa11.28□□□□□ -0.6
SPTBN1-202ENST00000356805 HSDL2Q6YN16 418 aa11.28□□□□□ -0.6
SPTBN1-202ENST00000356805 DUSP16Q9BY84 665 aa11.28□□□□□ -0.6
SPTBN1-202ENST00000356805 CPNE5Q9HCH3 593 aa11.28□□□□□ -0.6
SPTBN1-202ENST00000356805 MYH13Q9UKX3 1938 aa11.28□□□□□ -0.6
SPTBN1-202ENST00000356805 A8MUA0 341 aa11.28□□□□□ -0.6
SPTBN1-202ENST00000356805 CD2P06729 351 aa11.28□□□□□ -0.6
SPTBN1-202ENST00000356805 GJB1P08034 283 aa11.28□□□□□ -0.6
SPTBN1-202ENST00000356805 EPCAMP16422 314 aa11.28□□□□□ -0.6
SPTBN1-202ENST00000356805 RPIAP49247 311 aa11.28□□□□□ -0.6
SPTBN1-202ENST00000356805 COLEC12Q5KU26 742 aa11.28□□□□□ -0.6
SPTBN1-202ENST00000356805 RFWD3Q6PCD5 774 aa11.28□□□□□ -0.6
SPTBN1-202ENST00000356805 OTOP3Q7RTS5 596 aa11.28□□□□□ -0.6
SPTBN1-202ENST00000356805 PROKR2Q8NFJ6 384 aa11.28□□□□□ -0.6
SPTBN1-202ENST00000356805 SMG7Q92540 1137 aaKnown RBP11.28□□□□□ -0.6
SPTBN1-202ENST00000356805 IL12RB2Q99665 862 aa11.28□□□□□ -0.6
SPTBN1-202ENST00000356805 PCDHB11Q9Y5F2 797 aa11.28□□□□□ -0.6
SPTBN1-202ENST00000356805 ITGA5P08648 1049 aa11.28□□□□□ -0.6
SPTBN1-202ENST00000356805 MATKP42679 507 aa11.28□□□□□ -0.6
SPTBN1-202ENST00000356805 ALDH16A1Q8IZ83 802 aa11.28□□□□□ -0.6
SPTBN1-202ENST00000356805 PWWP2AQ96N64 755 aa11.28□□□□□ -0.6
SPTBN1-202ENST00000356805 XRN2Q9H0D6 950 aaKnown RBP eCLIP11.28□□□□□ -0.61e-7■■□□□ 14.3
SPTBN1-202ENST00000356805 MRPS30Q9NP92 439 aaKnown RBP11.28□□□□□ -0.6
SPTBN1-202ENST00000356805 CUEDC1Q9NWM3 386 aaPredicted RBP11.28□□□□□ -0.6
SPTBN1-202ENST00000356805 UBQLN2Q9UHD9 624 aa11.28□□□□□ -0.6
SPTBN1-202ENST00000356805 KCNU1A8MYU2 1149 aa11.27□□□□□ -0.6
SPTBN1-202ENST00000356805 WNT10BO00744 389 aa11.27□□□□□ -0.6
SPTBN1-202ENST00000356805 OAZ1P54368 228 aa11.27□□□□□ -0.6
SPTBN1-202ENST00000356805 TARDBPQ13148 414 aaKnown RBP eCLIP11.27□□□□□ -0.64e-6■■■■□ 19.5
SPTBN1-202ENST00000356805 GANABQ14697 944 aaKnown RBP11.27□□□□□ -0.6
SPTBN1-202ENST00000356805 LRRC73Q5JTD7 316 aa11.27□□□□□ -0.6
SPTBN1-202ENST00000356805 CLEC12AQ5QGZ9 265 aa11.27□□□□□ -0.6
SPTBN1-202ENST00000356805 GOLM1Q8NBJ4 401 aa11.27□□□□□ -0.6
SPTBN1-202ENST00000356805 SLC38A4Q969I6 547 aa11.27□□□□□ -0.6
SPTBN1-202ENST00000356805 ISOC1Q96CN7 298 aa11.27□□□□□ -0.6
SPTBN1-202ENST00000356805 TTPALQ9BTX7 342 aa11.27□□□□□ -0.6
SPTBN1-202ENST00000356805 ZNF700Q9H0M5 742 aa11.27□□□□□ -0.6
SPTBN1-202ENST00000356805 SEC61A2Q9H9S3 476 aa11.27□□□□□ -0.6
SPTBN1-202ENST00000356805 ERVK-5Q9HDB9 667 aa11.27□□□□□ -0.6
SPTBN1-202ENST00000356805 TREM1Q9NP99 234 aa11.27□□□□□ -0.6
SPTBN1-202ENST00000356805 VNN3Q9NY84 501 aa11.27□□□□□ -0.6
SPTBN1-202ENST00000356805 FARSAQ9Y285 508 aaKnown RBP11.27□□□□□ -0.6
SPTBN1-202ENST00000356805 PCDHB1Q9Y5F3 818 aa11.27□□□□□ -0.6
SPTBN1-202ENST00000356805 DLGAP1O14490 977 aa11.27□□□□□ -0.6
SPTBN1-202ENST00000356805 NOBOXO60393 691 aa11.27□□□□□ -0.6
SPTBN1-202ENST00000356805 KAT7O95251 611 aa11.27□□□□□ -0.6
SPTBN1-202ENST00000356805 GNA12Q03113 381 aa11.27□□□□□ -0.6
SPTBN1-202ENST00000356805 MARVELD2Q8N4S9 558 aa11.27□□□□□ -0.6
SPTBN1-202ENST00000356805 C7orf57Q8NEG2 295 aa11.27□□□□□ -0.6
SPTBN1-202ENST00000356805 THRSPQ92748 146 aa11.27□□□□□ -0.6
SPTBN1-202ENST00000356805 TTYH3Q9C0H2 523 aa11.27□□□□□ -0.6
SPTBN1-202ENST00000356805 MIOSQ9NXC5 875 aa11.27□□□□□ -0.6
SPTBN1-202ENST00000356805 DEC1Q9P2X7 70 aa11.27□□□□□ -0.6
SPTBN1-202ENST00000356805 COMMD3Q9UBI1 195 aa11.27□□□□□ -0.6
SPTBN1-202ENST00000356805 PLD2O14939 933 aa11.27□□□□□ -0.61
SPTBN1-202ENST00000356805 CDK14O94921 469 aa11.27□□□□□ -0.61
SPTBN1-202ENST00000356805 RPL7AP62424 266 aaKnown RBP11.27□□□□□ -0.61
SPTBN1-202ENST00000356805 ZACNQ401N2 412 aa11.27□□□□□ -0.61
SPTBN1-202ENST00000356805 FAM76BQ5HYJ3 339 aa11.27□□□□□ -0.61
SPTBN1-202ENST00000356805 ZNF311Q5JNZ3 666 aa11.27□□□□□ -0.61
SPTBN1-202ENST00000356805 INTS6LQ5JSJ4 861 aaKnown RBP11.27□□□□□ -0.61
SPTBN1-202ENST00000356805 ADGRA1Q86SQ6 560 aa11.27□□□□□ -0.61
SPTBN1-202ENST00000356805 ZNF101Q8IZC7 436 aa11.27□□□□□ -0.61
SPTBN1-202ENST00000356805 ZNF527Q8NB42 609 aa11.27□□□□□ -0.61
SPTBN1-202ENST00000356805 TRPM4Q8TD43 1214 aa11.27□□□□□ -0.61
SPTBN1-202ENST00000356805 TIFAQ96CG3 184 aa11.27□□□□□ -0.61
SPTBN1-202ENST00000356805 AGAP2Q99490 1192 aa11.27□□□□□ -0.61
SPTBN1-202ENST00000356805 WDR55Q9H6Y2 383 aaPredicted RBP11.27□□□□□ -0.61
SPTBN1-202ENST00000356805 EVLQ9UI08 416 aaPredicted RBP11.27□□□□□ -0.61
SPTBN1-202ENST00000356805 HSPB11Q9Y547 144 aa11.27□□□□□ -0.61
SPTBN1-202ENST00000356805 CFIP05156 583 aa11.27□□□□□ -0.61
SPTBN1-202ENST00000356805 VARSP26640 1264 aaKnown RBP11.27□□□□□ -0.61
SPTBN1-202ENST00000356805 WNT3AP56704 352 aa11.27□□□□□ -0.61
SPTBN1-202ENST00000356805 RHDQ02161 417 aa11.27□□□□□ -0.61
SPTBN1-202ENST00000356805 UBXN2BQ14CS0 331 aa11.27□□□□□ -0.61
SPTBN1-202ENST00000356805 STRADAQ7RTN6 431 aa11.27□□□□□ -0.61
SPTBN1-202ENST00000356805 ZNF565Q8N9K5 539 aa11.27□□□□□ -0.61
SPTBN1-202ENST00000356805 LYARQ9NX58 379 aaKnown RBP11.27□□□□□ -0.61
SPTBN1-202ENST00000356805 C9JVG2 144 aa11.27□□□□□ -0.61
SPTBN1-202ENST00000356805 H3BSA7 217 aa11.27□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 26.6 ms