RNA–Protein interactions for RNA: ENST00000355841.6

PDLIM7-202, Transcript of PDZ and LIM domain 7, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene PDLIM7, Length 1,689 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM7-202ENST00000355841 RAB11FIP5Q9BXF6 653 aa17.28■□□□□ 0.36
PDLIM7-202ENST00000355841 TRIM54Q9BYV2 358 aa17.28■□□□□ 0.36
PDLIM7-202ENST00000355841 RAB33BQ9H082 229 aa17.28■□□□□ 0.36
PDLIM7-202ENST00000355841 PDP2Q9P2J9 529 aa17.28■□□□□ 0.36
PDLIM7-202ENST00000355841 WASF3Q9UPY6 502 aa17.28■□□□□ 0.36
PDLIM7-202ENST00000355841 KLHL20Q9Y2M5 609 aa17.28■□□□□ 0.36
PDLIM7-202ENST00000355841 OARD1Q9Y530 152 aa17.28■□□□□ 0.36
PDLIM7-202ENST00000355841 A0A1W2PNU3 283 aaPredicted RBP17.27■□□□□ 0.36
PDLIM7-202ENST00000355841 A0A1W2PPV9 198 aa17.27■□□□□ 0.36
PDLIM7-202ENST00000355841 PABPN1LA6NDY0 278 aaKnown RBP17.27■□□□□ 0.36
PDLIM7-202ENST00000355841 E7ENX8 843 aa17.27■□□□□ 0.36
PDLIM7-202ENST00000355841 PRAMEF10O60809 474 aa17.27■□□□□ 0.36
PDLIM7-202ENST00000355841 ENO2P09104 434 aaPredicted RBP17.27■□□□□ 0.36
PDLIM7-202ENST00000355841 HGFP14210 728 aa17.27■□□□□ 0.36
PDLIM7-202ENST00000355841 TAP2Q03519 686 aa17.27■□□□□ 0.36
PDLIM7-202ENST00000355841 TGFBIQ15582 683 aa17.27■□□□□ 0.36
PDLIM7-202ENST00000355841 CLPPQ16740 277 aaPredicted RBP17.27■□□□□ 0.36
PDLIM7-202ENST00000355841 FBXO48Q5FWF7 155 aa17.27■□□□□ 0.36
PDLIM7-202ENST00000355841 SPESP1Q6UW49 350 aa17.27■□□□□ 0.36
PDLIM7-202ENST00000355841 GPSM1Q86YR5 675 aa17.27■□□□□ 0.36
PDLIM7-202ENST00000355841 PYCR2Q96C36 320 aa17.27■□□□□ 0.36
PDLIM7-202ENST00000355841 MED8Q96G25 268 aa17.27■□□□□ 0.36
PDLIM7-202ENST00000355841 EGFL8Q99944 293 aa17.27■□□□□ 0.36
PDLIM7-202ENST00000355841 DPYSL5Q9BPU6 564 aa17.27■□□□□ 0.36
PDLIM7-202ENST00000355841 RNF112Q9ULX5 631 aa17.27■□□□□ 0.36
PDLIM7-202ENST00000355841 NOVA2Q9UNW9 492 aaKnown RBP17.27■□□□□ 0.36
PDLIM7-202ENST00000355841 ANKRD12Q6UB98 2062 aa17.27■□□□□ 0.35
PDLIM7-202ENST00000355841 PTPRBP23467 1997 aa17.27■□□□□ 0.35
PDLIM7-202ENST00000355841 CDH3P22223 829 aa17.26■□□□□ 0.35
PDLIM7-202ENST00000355841 CCKBRP32239 447 aa17.26■□□□□ 0.35
PDLIM7-202ENST00000355841 AP1S2P56377 157 aa17.26■□□□□ 0.35
PDLIM7-202ENST00000355841 KIR2DS3Q14952 304 aa17.26■□□□□ 0.35
PDLIM7-202ENST00000355841 ARHGAP19Q14CB8 494 aa17.26■□□□□ 0.35
PDLIM7-202ENST00000355841 RASA2Q15283 850 aa17.26■□□□□ 0.35
PDLIM7-202ENST00000355841 KRT71Q3SY84 523 aa17.26■□□□□ 0.35
PDLIM7-202ENST00000355841 FOXR1Q6PIV2 292 aa17.26■□□□□ 0.35
PDLIM7-202ENST00000355841 AGTRAPQ6RW13 159 aa17.26■□□□□ 0.35
PDLIM7-202ENST00000355841 ARHGAP22Q7Z5H3 698 aa17.26■□□□□ 0.35
PDLIM7-202ENST00000355841 CCDC91Q7Z6B0 441 aa17.26■□□□□ 0.35
PDLIM7-202ENST00000355841 CLEC14AQ86T13 490 aa17.26■□□□□ 0.35
PDLIM7-202ENST00000355841 LRRC56Q8IYG6 542 aaPredicted RBP17.26■□□□□ 0.35
PDLIM7-202ENST00000355841 MIPEPQ99797 713 aa17.26■□□□□ 0.35
PDLIM7-202ENST00000355841 ROPN1BQ9BZX4 212 aaPredicted RBP17.26■□□□□ 0.35
PDLIM7-202ENST00000355841 TWSG1Q9GZX9 223 aa17.26■□□□□ 0.35
PDLIM7-202ENST00000355841 ROPN1Q9HAT0 212 aaPredicted RBP17.26■□□□□ 0.35
PDLIM7-202ENST00000355841 KNTC1P50748 2209 aa17.26■□□□□ 0.35
PDLIM7-202ENST00000355841 MED19A0JLT2 244 aaPredicted RBP17.26■□□□□ 0.35
PDLIM7-202ENST00000355841 TLCD2A6NGC4 264 aa17.26■□□□□ 0.35
PDLIM7-202ENST00000355841 SLC9B1P1A6NJY1 282 aa17.26■□□□□ 0.35
PDLIM7-202ENST00000355841 UBXN8O00124 270 aa17.26■□□□□ 0.35
PDLIM7-202ENST00000355841 MATN2O00339 956 aa17.26■□□□□ 0.35
PDLIM7-202ENST00000355841 PRICKLE3O43900 615 aaPredicted RBP17.26■□□□□ 0.35
PDLIM7-202ENST00000355841 ADRB1P08588 477 aa17.26■□□□□ 0.35
PDLIM7-202ENST00000355841 NAE1Q13564 534 aa17.26■□□□□ 0.35
PDLIM7-202ENST00000355841 ACAP2Q15057 778 aa17.26■□□□□ 0.35
PDLIM7-202ENST00000355841 SF1Q15637 639 aaKnown RBP17.26■□□□□ 0.35
PDLIM7-202ENST00000355841 CEP85LQ5SZL2 805 aa17.26■□□□□ 0.35
PDLIM7-202ENST00000355841 HMGCLL1Q8TB92 370 aa17.26■□□□□ 0.35
PDLIM7-202ENST00000355841 STAG3L4Q8TBR4 150 aa17.26■□□□□ 0.35
PDLIM7-202ENST00000355841 SMPDL3AQ92484 453 aa17.26■□□□□ 0.35
PDLIM7-202ENST00000355841 SCYL1Q96KG9 808 aa17.26■□□□□ 0.35
PDLIM7-202ENST00000355841 ATOH8Q96SQ7 321 aa17.26■□□□□ 0.35
PDLIM7-202ENST00000355841 CACNA1AO00555 2505 aa17.25■□□□□ 0.35
PDLIM7-202ENST00000355841 ST6GAL1P15907 406 aa17.25■□□□□ 0.35
PDLIM7-202ENST00000355841 H2AFXP16104 143 aaPredicted RBP17.25■□□□□ 0.35
PDLIM7-202ENST00000355841 HSD17B2P37059 387 aa17.25■□□□□ 0.35
PDLIM7-202ENST00000355841 TBPL1P62380 186 aa17.25■□□□□ 0.35
PDLIM7-202ENST00000355841 KCNAB1Q14722 419 aa17.25■□□□□ 0.35
PDLIM7-202ENST00000355841 C3orf38Q5JPI3 329 aa17.25■□□□□ 0.35
PDLIM7-202ENST00000355841 THEMIS2Q5TEJ8 643 aa17.25■□□□□ 0.35
PDLIM7-202ENST00000355841 KLC3Q6P597 504 aa17.25■□□□□ 0.35
PDLIM7-202ENST00000355841 SH2D5Q6ZV89 423 aa17.25■□□□□ 0.35
PDLIM7-202ENST00000355841 C4orf33Q8N1A6 199 aa17.25■□□□□ 0.35
PDLIM7-202ENST00000355841 OR2A1Q8NGT9 310 aa17.25■□□□□ 0.35
PDLIM7-202ENST00000355841 ESAMQ96AP7 390 aa17.25■□□□□ 0.35
PDLIM7-202ENST00000355841 FBXL8Q96CD0 374 aa17.25■□□□□ 0.35
PDLIM7-202ENST00000355841 TMEM109Q9BVC6 243 aa17.25■□□□□ 0.35
PDLIM7-202ENST00000355841 STRADBQ9C0K7 418 aa17.25■□□□□ 0.35
PDLIM7-202ENST00000355841 CENPHQ9H3R5 247 aa17.25■□□□□ 0.35
PDLIM7-202ENST00000355841 CD274Q9NZQ7 290 aa17.25■□□□□ 0.35
PDLIM7-202ENST00000355841 TAC3Q9UHF0 121 aa17.25■□□□□ 0.35
PDLIM7-202ENST00000355841 LGALS13Q9UHV8 139 aa17.25■□□□□ 0.35
PDLIM7-202ENST00000355841 AKAP13Q12802 2813 aa17.25■□□□□ 0.35
PDLIM7-202ENST00000355841 NCOR2Q9Y618 2525 aa17.24■□□□□ 0.35
PDLIM7-202ENST00000355841 SUPT3HB4E1H0 165 aa17.24■□□□□ 0.35
PDLIM7-202ENST00000355841 KERAO60938 352 aa17.24■□□□□ 0.35
PDLIM7-202ENST00000355841 SUPT3HO75486 399 aa17.24■□□□□ 0.35
PDLIM7-202ENST00000355841 ANXA5P08758 320 aa17.24■□□□□ 0.35
PDLIM7-202ENST00000355841 CCL4P13236 92 aa17.24■□□□□ 0.35
PDLIM7-202ENST00000355841 KRT4P19013 534 aa17.24■□□□□ 0.35
PDLIM7-202ENST00000355841 ITIH1P19827 911 aa17.24■□□□□ 0.35
PDLIM7-202ENST00000355841 OAS2P29728 719 aaKnown RBP17.24■□□□□ 0.35
PDLIM7-202ENST00000355841 RPA3P35244 121 aaPredicted RBP17.24■□□□□ 0.35
PDLIM7-202ENST00000355841 GDF5P43026 501 aa17.24■□□□□ 0.35
PDLIM7-202ENST00000355841 SH3BP2P78314 561 aa17.24■□□□□ 0.35
PDLIM7-202ENST00000355841 CASP8Q14790 479 aa17.24■□□□□ 0.35
PDLIM7-202ENST00000355841 KIF26BQ2KJY2 2108 aa17.24■□□□□ 0.35
PDLIM7-202ENST00000355841 KIAA1614Q5VZ46 1190 aa17.24■□□□□ 0.35
PDLIM7-202ENST00000355841 C16orf46Q6P387 395 aa17.24■□□□□ 0.35
PDLIM7-202ENST00000355841 RAB11FIP2Q7L804 512 aa17.24■□□□□ 0.35
Retrieved 100 of 20,778 RNA–protein pairs in 46.7 ms