RNA–Protein interactions for RNA: ENST00000352993.7

BRCA1-201, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 5 BASIC

Gene BRCA1, Length 3,668 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-201ENST00000352993 CACNB2Q08289 660 aaPredicted RBP7.45□□□□□ -1.22
BRCA1-201ENST00000352993 FAPQ12884 760 aa7.45□□□□□ -1.22
BRCA1-201ENST00000352993 NPRL3Q12980 569 aa7.45□□□□□ -1.22
BRCA1-201ENST00000352993 KEAP1Q14145 624 aa7.45□□□□□ -1.22
BRCA1-201ENST00000352993 BAK1Q16611 211 aa7.45□□□□□ -1.22
BRCA1-201ENST00000352993 PROX2Q3B8N5 592 aa7.45□□□□□ -1.22
BRCA1-201ENST00000352993 PYDC2Q56P42 97 aa7.45□□□□□ -1.22
BRCA1-201ENST00000352993 GNASQ5JWF2 1037 aa7.45□□□□□ -1.22
BRCA1-201ENST00000352993 WSCD1Q658N2 575 aa7.45□□□□□ -1.22
BRCA1-201ENST00000352993 PLET1Q6UQ28 207 aa7.45□□□□□ -1.22
BRCA1-201ENST00000352993 Q6ZSR9 355 aa7.45□□□□□ -1.22
BRCA1-201ENST00000352993 CLEC20AQ6ZU45 233 aa7.45□□□□□ -1.22
BRCA1-201ENST00000352993 SLC46A3Q7Z3Q1 461 aa7.45□□□□□ -1.22
BRCA1-201ENST00000352993 VTCN1Q7Z7D3 282 aa7.45□□□□□ -1.22
BRCA1-201ENST00000352993 OR8H3Q8N146 312 aa7.45□□□□□ -1.22
BRCA1-201ENST00000352993 DACT3Q96B18 629 aaPredicted RBP7.45□□□□□ -1.22
BRCA1-201ENST00000352993 COQ8BQ96D53 544 aa7.45□□□□□ -1.22
BRCA1-201ENST00000352993 ZNF419Q96HQ0 510 aaPredicted RBP7.45□□□□□ -1.22
BRCA1-201ENST00000352993 SMURF1Q9HCE7 757 aa7.45□□□□□ -1.22
BRCA1-201ENST00000352993 CATSPERZQ9NTU4 200 aa7.45□□□□□ -1.22
BRCA1-201ENST00000352993 ACOXLQ9NUZ1 547 aa7.45□□□□□ -1.22
BRCA1-201ENST00000352993 NDFIP2Q9NV92 336 aa7.45□□□□□ -1.22
BRCA1-201ENST00000352993 HOXC10Q9NYD6 342 aa7.45□□□□□ -1.22
BRCA1-201ENST00000352993 AGO1Q9UL18 857 aaKnown RBP7.45□□□□□ -1.22
BRCA1-201ENST00000352993 DUSP12Q9UNI6 340 aa7.45□□□□□ -1.22
BRCA1-201ENST00000352993 A8MUA0 341 aa7.45□□□□□ -1.22
BRCA1-201ENST00000352993 H3BM21 787 aa7.45□□□□□ -1.22
BRCA1-201ENST00000352993 MAFKO60675 156 aa7.45□□□□□ -1.22
BRCA1-201ENST00000352993 SERPINI2O75830 405 aa7.45□□□□□ -1.22
BRCA1-201ENST00000352993 RECQL4O94761 1208 aa7.45□□□□□ -1.22
BRCA1-201ENST00000352993 SNX4O95219 450 aa7.45□□□□□ -1.22
BRCA1-201ENST00000352993 PTHP01270 115 aa7.45□□□□□ -1.22
BRCA1-201ENST00000352993 TSPAN19P0C672 248 aa7.45□□□□□ -1.22
BRCA1-201ENST00000352993 FDXRP22570 491 aa7.45□□□□□ -1.22
BRCA1-201ENST00000352993 ERP29P30040 261 aaKnown RBP7.45□□□□□ -1.22
BRCA1-201ENST00000352993 DNAJA1P31689 397 aaKnown RBP7.45□□□□□ -1.22
BRCA1-201ENST00000352993 DAOAP59103 153 aa7.45□□□□□ -1.22
BRCA1-201ENST00000352993 C19orf57Q0VDD7 668 aa7.45□□□□□ -1.22
BRCA1-201ENST00000352993 ST3GAL4Q11206 333 aa7.45□□□□□ -1.22
BRCA1-201ENST00000352993 GALNT3Q14435 633 aa7.45□□□□□ -1.22
BRCA1-201ENST00000352993 IRF3Q14653 427 aa7.45□□□□□ -1.22
BRCA1-201ENST00000352993 ZC3H12BQ5HYM0 836 aaKnown RBP7.45□□□□□ -1.22
BRCA1-201ENST00000352993 CAPN13Q6MZZ7 669 aaPredicted RBP7.45□□□□□ -1.22
BRCA1-201ENST00000352993 RGMBQ6NW40 437 aa7.45□□□□□ -1.22
BRCA1-201ENST00000352993 VANGL1Q8TAA9 524 aaPredicted RBP7.45□□□□□ -1.22
BRCA1-201ENST00000352993 KIAA1191Q96A73 305 aa7.45□□□□□ -1.22
BRCA1-201ENST00000352993 PHF21AQ96BD5 680 aa7.45□□□□□ -1.22
BRCA1-201ENST00000352993 MSANTD3Q96H12 275 aa7.45□□□□□ -1.22
BRCA1-201ENST00000352993 MFSD1Q9H3U5 465 aa7.45□□□□□ -1.22
BRCA1-201ENST00000352993 CATSPERBQ9H7T0 1116 aa7.45□□□□□ -1.22
BRCA1-201ENST00000352993 RAD18Q9NS91 495 aa7.45□□□□□ -1.22
BRCA1-201ENST00000352993 MIOSQ9NXC5 875 aa7.45□□□□□ -1.22
BRCA1-201ENST00000352993 ZNF224Q9NZL3 707 aa7.45□□□□□ -1.22
BRCA1-201ENST00000352993 TMPRSS11EQ9UL52 423 aa7.45□□□□□ -1.22
BRCA1-201ENST00000352993 PCDHB5Q9Y5E4 795 aa7.45□□□□□ -1.22
BRCA1-201ENST00000352993 LRATO95237 230 aa7.45□□□□□ -1.22
BRCA1-201ENST00000352993 STAU1O95793 577 aaKnown RBP7.45□□□□□ -1.22
BRCA1-201ENST00000352993 FABP3P05413 133 aa7.45□□□□□ -1.22
BRCA1-201ENST00000352993 PGRP06401 933 aa7.45□□□□□ -1.22
BRCA1-201ENST00000352993 SLC10A3P09131 477 aa7.45□□□□□ -1.22
BRCA1-201ENST00000352993 POLR2CP19387 275 aaPredicted RBP7.45□□□□□ -1.22
BRCA1-201ENST00000352993 ACVR2AP27037 513 aa7.45□□□□□ -1.22
BRCA1-201ENST00000352993 SSTR4P31391 388 aa7.45□□□□□ -1.22
BRCA1-201ENST00000352993 ADRA1AP35348 466 aa7.45□□□□□ -1.22
BRCA1-201ENST00000352993 SLC19A1P41440 591 aa7.45□□□□□ -1.22
BRCA1-201ENST00000352993 RGS6P49758 472 aa7.45□□□□□ -1.22
BRCA1-201ENST00000352993 AIF1P55008 147 aa7.45□□□□□ -1.22
BRCA1-201ENST00000352993 ERVPABLB-1P60509 514 aa7.45□□□□□ -1.22
BRCA1-201ENST00000352993 CSTF3Q12996 717 aaKnown RBP7.45□□□□□ -1.22
BRCA1-201ENST00000352993 SEMA3BQ13214 749 aa7.45□□□□□ -1.22
BRCA1-201ENST00000352993 CAMK2GQ13555 558 aaPredicted RBP7.45□□□□□ -1.22
BRCA1-201ENST00000352993 PTPRNQ16849 979 aa7.45□□□□□ -1.22
BRCA1-201ENST00000352993 PARP15Q460N3 678 aa7.45□□□□□ -1.22
BRCA1-201ENST00000352993 NBPF12Q5TAG4 269 aaPredicted RBP7.45□□□□□ -1.22
BRCA1-201ENST00000352993 MARC1Q5VT66 337 aa7.45□□□□□ -1.22
BRCA1-201ENST00000352993 TIGD7Q6NT04 549 aaPredicted RBP7.45□□□□□ -1.22
BRCA1-201ENST00000352993 GPRIN1Q7Z2K8 1008 aa7.45□□□□□ -1.22
BRCA1-201ENST00000352993 TAC4Q86UU9 113 aa7.45□□□□□ -1.22
BRCA1-201ENST00000352993 OSTM1Q86WC4 334 aa7.45□□□□□ -1.22
BRCA1-201ENST00000352993 SLC44A2Q8IWA5 706 aaPredicted RBP7.45□□□□□ -1.22
BRCA1-201ENST00000352993 LIX1Q8N485 282 aa7.45□□□□□ -1.22
BRCA1-201ENST00000352993 LRRC52Q8N7C0 313 aa7.45□□□□□ -1.22
BRCA1-201ENST00000352993 PAF1Q8N7H5 531 aa7.45□□□□□ -1.22
BRCA1-201ENST00000352993 OR52J3Q8NH60 311 aa7.45□□□□□ -1.22
BRCA1-201ENST00000352993 CHAC2Q8WUX2 184 aa7.45□□□□□ -1.22
BRCA1-201ENST00000352993 PCNPQ8WW12 178 aaKnown RBP7.45□□□□□ -1.22
BRCA1-201ENST00000352993 DIRAS2Q96HU8 199 aa7.45□□□□□ -1.22
BRCA1-201ENST00000352993 SLC2A13Q96QE2 648 aa7.45□□□□□ -1.22
BRCA1-201ENST00000352993 ASPNQ9BXN1 380 aa7.45□□□□□ -1.22
BRCA1-201ENST00000352993 NXF3Q9H4D5 531 aaKnown RBP7.45□□□□□ -1.22
BRCA1-201ENST00000352993 TRIM45Q9H8W5 580 aaPredicted RBP7.45□□□□□ -1.22
BRCA1-201ENST00000352993 OLA1Q9NTK5 396 aaKnown RBP7.45□□□□□ -1.22
BRCA1-201ENST00000352993 CCDC59Q9P031 241 aaKnown RBP7.45□□□□□ -1.22
BRCA1-201ENST00000352993 SPASTQ9UBP0 616 aa7.45□□□□□ -1.22
BRCA1-201ENST00000352993 TRMT6Q9UJA5 497 aaKnown RBP7.45□□□□□ -1.22
BRCA1-201ENST00000352993 UBQLN1Q9UMX0 589 aaKnown RBP7.45□□□□□ -1.22
BRCA1-201ENST00000352993 CLCA3PQ9Y6N3 262 aa7.45□□□□□ -1.22
BRCA1-201ENST00000352993 HSPE1-MOB4S4R3N1 261 aa7.45□□□□□ -1.22
BRCA1-201ENST00000352993 ANK1P16157 1881 aa7.44□□□□□ -1.22
BRCA1-201ENST00000352993 A0A0U1RQS6 177 aa7.44□□□□□ -1.22
Retrieved 100 of 20,778 RNA–protein pairs in 20 ms