RNA–Protein interactions for RNA: ENST00000349748.7

CAPN3-203, Transcript of calpain 3, humanhuman

TSL 1 (best) BASIC

Gene CAPN3, Length 2,955 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN3-203ENST00000349748 PLA2G10O15496 165 aa10.41□□□□□ -0.74
CAPN3-203ENST00000349748 PRPSAP2O60256 369 aa10.41□□□□□ -0.74
CAPN3-203ENST00000349748 PGK1P00558 417 aa10.41□□□□□ -0.74
CAPN3-203ENST00000349748 MYL3P08590 195 aa10.41□□□□□ -0.74
CAPN3-203ENST00000349748 CSF3P09919 207 aa10.41□□□□□ -0.74
CAPN3-203ENST00000349748 CD19P15391 556 aa10.41□□□□□ -0.74
CAPN3-203ENST00000349748 MYL12AP19105 171 aa10.41□□□□□ -0.74
CAPN3-203ENST00000349748 DCTP40126 519 aa10.41□□□□□ -0.74
CAPN3-203ENST00000349748 CLCN4P51793 760 aa10.41□□□□□ -0.74
CAPN3-203ENST00000349748 CDH17Q12864 832 aa10.41□□□□□ -0.74
CAPN3-203ENST00000349748 VEPH1Q14D04 833 aa10.41□□□□□ -0.74
CAPN3-203ENST00000349748 RPS6KA2Q15349 733 aa10.41□□□□□ -0.74
CAPN3-203ENST00000349748 KLHL12Q53G59 568 aa10.41□□□□□ -0.74
CAPN3-203ENST00000349748 SAXO2Q658L1 398 aa10.41□□□□□ -0.74
CAPN3-203ENST00000349748 B3GNT9Q6UX72 402 aa10.41□□□□□ -0.74
CAPN3-203ENST00000349748 GALNT10Q86SR1 603 aa10.41□□□□□ -0.74
CAPN3-203ENST00000349748 CDKL3Q8IVW4 592 aaPredicted RBP10.41□□□□□ -0.74
CAPN3-203ENST00000349748 CEP97Q8IW35 865 aa10.41□□□□□ -0.74
CAPN3-203ENST00000349748 STPG2Q8N412 459 aa10.41□□□□□ -0.74
CAPN3-203ENST00000349748 LGMNQ99538 433 aa10.41□□□□□ -0.74
CAPN3-203ENST00000349748 PAK6Q9NQU5 681 aaPredicted RBP10.41□□□□□ -0.74
CAPN3-203ENST00000349748 DYRK4Q9NR20 520 aa10.41□□□□□ -0.74
CAPN3-203ENST00000349748 ADARB2Q9NS39 739 aaKnown RBP10.41□□□□□ -0.74
CAPN3-203ENST00000349748 MIOSQ9NXC5 875 aa10.41□□□□□ -0.74
CAPN3-203ENST00000349748 KCMF1Q9P0J7 381 aa10.41□□□□□ -0.74
CAPN3-203ENST00000349748 DNAJB9Q9UBS3 223 aa10.41□□□□□ -0.74
CAPN3-203ENST00000349748 ACSL5Q9ULC5 683 aa10.41□□□□□ -0.74
CAPN3-203ENST00000349748 ACOT9Q9Y305 439 aa10.41□□□□□ -0.74
CAPN3-203ENST00000349748 PKP3Q9Y446 797 aa10.41□□□□□ -0.74
CAPN3-203ENST00000349748 TRBV23-1A0A0A0MS06 115 aa10.41□□□□□ -0.74
CAPN3-203ENST00000349748 PCDH17O14917 1159 aa10.41□□□□□ -0.74
CAPN3-203ENST00000349748 ANKRD28O15084 1053 aa10.41□□□□□ -0.74
CAPN3-203ENST00000349748 DARSP14868 501 aaKnown RBP10.41□□□□□ -0.74
CAPN3-203ENST00000349748 PSMB4P28070 264 aa10.41□□□□□ -0.74
CAPN3-203ENST00000349748 MTPNP58546 118 aa10.41□□□□□ -0.74
CAPN3-203ENST00000349748 MCCD1P59942 119 aaPredicted RBP10.41□□□□□ -0.74
CAPN3-203ENST00000349748 FBXO43Q4G163 708 aa10.41□□□□□ -0.74
CAPN3-203ENST00000349748 TRNP1Q6NT89 227 aa10.41□□□□□ -0.74
CAPN3-203ENST00000349748 ZC3HC1Q86WB0 502 aaKnown RBP10.41□□□□□ -0.74
CAPN3-203ENST00000349748 ZSWIM9Q86XI8 627 aa10.41□□□□□ -0.74
CAPN3-203ENST00000349748 XYLT1Q86Y38 959 aa10.41□□□□□ -0.74
CAPN3-203ENST00000349748 DENND1CQ8IV53 801 aa10.41□□□□□ -0.74
CAPN3-203ENST00000349748 SULF1Q8IWU6 871 aa10.41□□□□□ -0.74
CAPN3-203ENST00000349748 OR10Q1Q8NGQ4 319 aa10.41□□□□□ -0.74
CAPN3-203ENST00000349748 ACER1Q8TDN7 264 aa10.41□□□□□ -0.74
CAPN3-203ENST00000349748 CCDC126Q96EE4 140 aa10.41□□□□□ -0.74
CAPN3-203ENST00000349748 AHCYL2Q96HN2 611 aaKnown RBP10.41□□□□□ -0.74
CAPN3-203ENST00000349748 RPRD1AQ96P16 312 aaPredicted RBP10.41□□□□□ -0.74
CAPN3-203ENST00000349748 LDAHQ9H6V9 325 aa10.41□□□□□ -0.74
CAPN3-203ENST00000349748 CNTN6Q9UQ52 1028 aa10.41□□□□□ -0.74
CAPN3-203ENST00000349748 SCN4AP35499 1836 aa10.4□□□□□ -0.74
CAPN3-203ENST00000349748 ZCWPW2A0A1B0GU75 182 aa10.4□□□□□ -0.74
CAPN3-203ENST00000349748 SLC30A4O14863 429 aa10.4□□□□□ -0.74
CAPN3-203ENST00000349748 ST8SIA5O15466 376 aa10.4□□□□□ -0.74
CAPN3-203ENST00000349748 MPC2O95563 127 aa10.4□□□□□ -0.74
CAPN3-203ENST00000349748 DIO3P55073 304 aa10.4□□□□□ -0.74
CAPN3-203ENST00000349748 RRAS2P62070 204 aaPredicted RBP10.4□□□□□ -0.74
CAPN3-203ENST00000349748 RUNX1T1Q06455 604 aa10.4□□□□□ -0.74
CAPN3-203ENST00000349748 Q3ZCU0 254 aa10.4□□□□□ -0.74
CAPN3-203ENST00000349748 SEZ6Q53EL9 994 aa10.4□□□□□ -0.74
CAPN3-203ENST00000349748 SPANXN3Q5MJ09 141 aa10.4□□□□□ -0.74
CAPN3-203ENST00000349748 PDZK1Q5T2W1 519 aa10.4□□□□□ -0.74
CAPN3-203ENST00000349748 CCDC149Q6ZUS6 474 aa10.4□□□□□ -0.74
CAPN3-203ENST00000349748 OR11H4Q8NGC9 324 aa10.4□□□□□ -0.74
CAPN3-203ENST00000349748 OR4D10Q8NGI6 311 aa10.4□□□□□ -0.74
CAPN3-203ENST00000349748 TEX47Q8TBZ9 253 aa10.4□□□□□ -0.74
CAPN3-203ENST00000349748 BSNDQ8WZ55 320 aa10.4□□□□□ -0.74
CAPN3-203ENST00000349748 C18orf25Q96B23 403 aaPredicted RBP10.4□□□□□ -0.74
CAPN3-203ENST00000349748 QRFPRQ96P65 431 aa10.4□□□□□ -0.74
CAPN3-203ENST00000349748 RBP7Q96R05 134 aa10.4□□□□□ -0.74
CAPN3-203ENST00000349748 MLPHQ9BV36 600 aaPredicted RBP10.4□□□□□ -0.74
CAPN3-203ENST00000349748 MRPL4Q9BYD3 311 aaKnown RBP10.4□□□□□ -0.74
CAPN3-203ENST00000349748 GLIS2Q9BZE0 524 aaPredicted RBP10.4□□□□□ -0.74
CAPN3-203ENST00000349748 MUC13Q9H3R2 512 aa10.4□□□□□ -0.74
CAPN3-203ENST00000349748 SMPD4Q9NXE4 827 aa10.4□□□□□ -0.74
CAPN3-203ENST00000349748 ORC6Q9Y5N6 252 aa10.4□□□□□ -0.74
CAPN3-203ENST00000349748 EFCAB10A6NFE3 127 aa10.4□□□□□ -0.75
CAPN3-203ENST00000349748 GLTPD2A6NH11 291 aa10.4□□□□□ -0.75
CAPN3-203ENST00000349748 TULP3O75386 442 aa10.4□□□□□ -0.75
CAPN3-203ENST00000349748 CBX7O95931 251 aa10.4□□□□□ -0.75
CAPN3-203ENST00000349748 FABP1P07148 127 aa10.4□□□□□ -0.75
CAPN3-203ENST00000349748 TPOP07202 933 aa10.4□□□□□ -0.75
CAPN3-203ENST00000349748 SLC2A3P11169 496 aa10.4□□□□□ -0.75
CAPN3-203ENST00000349748 MLNP12872 115 aa10.4□□□□□ -0.75
CAPN3-203ENST00000349748 IGFBP5P24593 272 aa10.4□□□□□ -0.75
CAPN3-203ENST00000349748 RBP5P82980 135 aa10.4□□□□□ -0.75
CAPN3-203ENST00000349748 ZNF91Q05481 1191 aa10.4□□□□□ -0.75
CAPN3-203ENST00000349748 SPP2Q13103 211 aa10.4□□□□□ -0.75
CAPN3-203ENST00000349748 CDH18Q13634 790 aa10.4□□□□□ -0.75
CAPN3-203ENST00000349748 ZNF124Q15973 351 aa10.4□□□□□ -0.75
CAPN3-203ENST00000349748 ETFDHQ16134 617 aa10.4□□□□□ -0.75
CAPN3-203ENST00000349748 ZNF800Q2TB10 664 aaPredicted RBP eCLIP10.4□□□□□ -0.75
CAPN3-203ENST00000349748 MPP7Q5T2T1 576 aa10.4□□□□□ -0.75
CAPN3-203ENST00000349748 FAM102AQ5T9C2 384 aaPredicted RBP10.4□□□□□ -0.75
CAPN3-203ENST00000349748 ERICH5Q6P6B1 374 aa10.4□□□□□ -0.75
CAPN3-203ENST00000349748 FAM131AQ6UXB0 335 aa10.4□□□□□ -0.75
CAPN3-203ENST00000349748 OTOP2Q7RTS6 562 aa10.4□□□□□ -0.75
CAPN3-203ENST00000349748 RNF180Q86T96 592 aa10.4□□□□□ -0.75
CAPN3-203ENST00000349748 KCNMB4Q86W47 210 aa10.4□□□□□ -0.75
CAPN3-203ENST00000349748 FAM217AQ8IXS0 508 aa10.4□□□□□ -0.75
Retrieved 100 of 20,778 RNA–protein pairs in 41.7 ms