RNA–Protein interactions for RNA: ENST00000345865.6

UPF3B-202, Transcript of UPF3B, regulator of nonsense mediated mRNA decay, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene UPF3B, Length 2,335 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UPF3B-202ENST00000345865 MTCL1Q9Y4B5 1905 aaKnown RBP15.02■□□□□ -0
UPF3B-202ENST00000345865 B4GAT1O43505 415 aa15.02■□□□□ -0
UPF3B-202ENST00000345865 GMNNO75496 209 aa15.02■□□□□ -0
UPF3B-202ENST00000345865 CTSLP07711 333 aa15.02■□□□□ -0
UPF3B-202ENST00000345865 HNMTP50135 292 aa15.02■□□□□ -0
UPF3B-202ENST00000345865 PLEKHS1Q5SXH7 462 aa15.02■□□□□ -0
UPF3B-202ENST00000345865 ZDHHC20Q5W0Z9 365 aa15.02■□□□□ -0
UPF3B-202ENST00000345865 TTC23LQ6PF05 361 aa15.02■□□□□ -0
UPF3B-202ENST00000345865 RASGRP3Q8IV61 690 aa15.02■□□□□ -0
UPF3B-202ENST00000345865 LILRA3Q8N6C8 439 aaPredicted RBP15.02■□□□□ -0
UPF3B-202ENST00000345865 OR10Q1Q8NGQ4 319 aa15.02■□□□□ -0
UPF3B-202ENST00000345865 ELMO1Q92556 727 aa15.02■□□□□ -0
UPF3B-202ENST00000345865 SLC47A1Q96FL8 570 aa15.02■□□□□ -0
UPF3B-202ENST00000345865 APOLD1Q96LR9 279 aa15.02■□□□□ -0
UPF3B-202ENST00000345865 HHIPQ96QV1 700 aa15.02■□□□□ -0
UPF3B-202ENST00000345865 UGT2B28Q9BY64 529 aa15.02■□□□□ -0
UPF3B-202ENST00000345865 KCNH6Q9H252 994 aa15.02■□□□□ -0
UPF3B-202ENST00000345865 PCDH12Q9NPG4 1184 aa15.02■□□□□ -0
UPF3B-202ENST00000345865 SPHK2Q9NRA0 654 aa15.02■□□□□ -0
UPF3B-202ENST00000345865 TDP1Q9NUW8 608 aa15.02■□□□□ -0
UPF3B-202ENST00000345865 PKD2L2Q9NZM6 624 aa15.02■□□□□ -0
UPF3B-202ENST00000345865 ERVK-11Q9UQG0 969 aa15.02■□□□□ -0
UPF3B-202ENST00000345865 MAN2B2Q9Y2E5 1009 aa15.02■□□□□ -0
UPF3B-202ENST00000345865 CREG1O75629 220 aa15.01□□□□□ -0.01
UPF3B-202ENST00000345865 TIMP1P01033 207 aa15.01□□□□□ -0.01
UPF3B-202ENST00000345865 CST1P01037 141 aa15.01□□□□□ -0.01
UPF3B-202ENST00000345865 MYCLP1P12525 358 aaPredicted RBP15.01□□□□□ -0.01
UPF3B-202ENST00000345865 AMD1P17707 334 aa15.01□□□□□ -0.01
UPF3B-202ENST00000345865 PRPH2P23942 346 aa15.01□□□□□ -0.01
UPF3B-202ENST00000345865 ELK4P28324 431 aa15.01□□□□□ -0.01
UPF3B-202ENST00000345865 S100A3P33764 101 aa15.01□□□□□ -0.01
UPF3B-202ENST00000345865 NRIP1P48552 1158 aa15.01□□□□□ -0.01
UPF3B-202ENST00000345865 SH3BGRP55822 239 aaPredicted RBP15.01□□□□□ -0.01
UPF3B-202ENST00000345865 POLR2LP62875 67 aaKnown RBP15.01□□□□□ -0.01
UPF3B-202ENST00000345865 PGS1Q32NB8 556 aa15.01□□□□□ -0.01
UPF3B-202ENST00000345865 POM121L1PQ3SYA9 428 aa15.01□□□□□ -0.01
UPF3B-202ENST00000345865 ARSIQ5FYB1 569 aa15.01□□□□□ -0.01
UPF3B-202ENST00000345865 TMEM179BQ7Z7N9 219 aa15.01□□□□□ -0.01
UPF3B-202ENST00000345865 GPR149Q86SP6 731 aa15.01□□□□□ -0.01
UPF3B-202ENST00000345865 CLEC4FQ8N1N0 589 aa15.01□□□□□ -0.01
UPF3B-202ENST00000345865 TCAIMQ8N3R3 496 aa15.01□□□□□ -0.01
UPF3B-202ENST00000345865 FAM162AQ96A26 154 aa15.01□□□□□ -0.01
UPF3B-202ENST00000345865 CMTM7Q96FZ5 175 aa15.01□□□□□ -0.01
UPF3B-202ENST00000345865 MRGPRX3Q96LB0 322 aa15.01□□□□□ -0.01
UPF3B-202ENST00000345865 TCF25Q9BQ70 676 aa15.01□□□□□ -0.01
UPF3B-202ENST00000345865 EMILIN2Q9BXX0 1053 aa15.01□□□□□ -0.01
UPF3B-202ENST00000345865 DCAF13Q9NV06 445 aaKnown RBP15.01□□□□□ -0.01
UPF3B-202ENST00000345865 THEGQ9P2T0 379 aa15.01□□□□□ -0.01
UPF3B-202ENST00000345865 EBF1Q9UH73 591 aa15.01□□□□□ -0.01
UPF3B-202ENST00000345865 CIDEBQ9UHD4 219 aa15.01□□□□□ -0.01
UPF3B-202ENST00000345865 ERVW-1Q9UQF0 538 aa15.01□□□□□ -0.01
UPF3B-202ENST00000345865 A0A096LPI6 279 aa15.01□□□□□ -0.01
UPF3B-202ENST00000345865 H0YAE9 185 aa15.01□□□□□ -0.01
UPF3B-202ENST00000345865 ERN1O75460 977 aaKnown RBP15.01□□□□□ -0.01
UPF3B-202ENST00000345865 ALBP02768 609 aa15.01□□□□□ -0.01
UPF3B-202ENST00000345865 TIMP2P16035 220 aa15.01□□□□□ -0.01
UPF3B-202ENST00000345865 CHIT1Q13231 466 aa15.01□□□□□ -0.01
UPF3B-202ENST00000345865 PMS2P3Q13401 168 aa15.01□□□□□ -0.01
UPF3B-202ENST00000345865 CCSMST1Q4G0I0 132 aa15.01□□□□□ -0.01
UPF3B-202ENST00000345865 EEF1AKMT2Q5JPI9 291 aaKnown RBP15.01□□□□□ -0.01
UPF3B-202ENST00000345865 FRG2Q64ET8 278 aa15.01□□□□□ -0.01
UPF3B-202ENST00000345865 ATG9BQ674R7 924 aa15.01□□□□□ -0.01
UPF3B-202ENST00000345865 CYP2U1Q7Z449 544 aa15.01□□□□□ -0.01
UPF3B-202ENST00000345865 OR52E4Q8NGH9 312 aa15.01□□□□□ -0.01
UPF3B-202ENST00000345865 ZSWIM3Q96MP5 696 aa15.01□□□□□ -0.01
UPF3B-202ENST00000345865 FRG2BQ96QU4 278 aa15.01□□□□□ -0.01
UPF3B-202ENST00000345865 SH3GL1Q99961 368 aa15.01□□□□□ -0.01
UPF3B-202ENST00000345865 RIOK2Q9BVS4 552 aaKnown RBP15.01□□□□□ -0.01
UPF3B-202ENST00000345865 EBPLQ9BY08 206 aa15.01□□□□□ -0.01
UPF3B-202ENST00000345865 DNAJC11Q9NVH1 559 aa15.01□□□□□ -0.01
UPF3B-202ENST00000345865 DNAJB9Q9UBS3 223 aa15.01□□□□□ -0.01
UPF3B-202ENST00000345865 CDC14AQ9UNH5 594 aa15.01□□□□□ -0.01
UPF3B-202ENST00000345865 G3V2T6 193 aa15□□□□□ -0.01
UPF3B-202ENST00000345865 NOBOXO60393 691 aa15□□□□□ -0.01
UPF3B-202ENST00000345865 SCELO95171 688 aa15□□□□□ -0.01
UPF3B-202ENST00000345865 THRBP10828 461 aa15□□□□□ -0.01
UPF3B-202ENST00000345865 PRPS2P11908 318 aa15□□□□□ -0.01
UPF3B-202ENST00000345865 PFKLP17858 780 aa15□□□□□ -0.01
UPF3B-202ENST00000345865 VIPR1P32241 457 aa15□□□□□ -0.01
UPF3B-202ENST00000345865 POLR2IP36954 125 aaKnown RBP15□□□□□ -0.01
UPF3B-202ENST00000345865 HALP42357 657 aa15□□□□□ -0.01
UPF3B-202ENST00000345865 NTHL1P78549 312 aa15□□□□□ -0.01
UPF3B-202ENST00000345865 SF1Q15637 639 aaKnown RBP15□□□□□ -0.01
UPF3B-202ENST00000345865 ZBED5Q49AG3 693 aa15□□□□□ -0.01
UPF3B-202ENST00000345865 HENMT1Q5T8I9 393 aaKnown RBP15□□□□□ -0.01
UPF3B-202ENST00000345865 OR4F3Q6IEY1 312 aa15□□□□□ -0.01
UPF3B-202ENST00000345865 BRAT1Q6PJG6 821 aa15□□□□□ -0.01
UPF3B-202ENST00000345865 GPR141Q7Z602 305 aa15□□□□□ -0.01
UPF3B-202ENST00000345865 CLVS1Q8IUQ0 354 aaPredicted RBP15□□□□□ -0.01
UPF3B-202ENST00000345865 ZNF366Q8N895 744 aa15□□□□□ -0.01
UPF3B-202ENST00000345865 MCOLN3Q8TDD5 553 aa15□□□□□ -0.01
UPF3B-202ENST00000345865 TESCQ96BS2 214 aa15□□□□□ -0.01
UPF3B-202ENST00000345865 HEPHQ9BQS7 1158 aa15□□□□□ -0.01
UPF3B-202ENST00000345865 TOR3AQ9H497 397 aa15□□□□□ -0.01
UPF3B-202ENST00000345865 WNT6Q9Y6F9 365 aa15□□□□□ -0.01
UPF3B-202ENST00000345865 ARHGEF33A8MVX0 844 aa15□□□□□ -0.01
UPF3B-202ENST00000345865 FAM220BPB1ANY3 271 aa15□□□□□ -0.01
UPF3B-202ENST00000345865 NPIPB8E9PQR5 432 aa15□□□□□ -0.01
UPF3B-202ENST00000345865 SLC16A5O15375 505 aa15□□□□□ -0.01
UPF3B-202ENST00000345865 SLCO2B1O94956 709 aa15□□□□□ -0.01
Retrieved 100 of 20,778 RNA–protein pairs in 48.5 ms