RNA–Protein interactions for RNA: ENST00000343200.9

VCAN-203, Transcript of versican, humanhuman

TSL 1 (best) BASIC

Gene VCAN, Length 9,455 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCAN-203ENST00000343200 HLA-EP13747 358 aa6.05□□□□□ -1.44
VCAN-203ENST00000343200 ACVR2AP27037 513 aa6.05□□□□□ -1.44
VCAN-203ENST00000343200 NUDT1P36639 197 aa6.05□□□□□ -1.44
VCAN-203ENST00000343200 SCNN1DP51172 638 aa6.05□□□□□ -1.44
VCAN-203ENST00000343200 NKX2-5P52952 324 aaPredicted RBP6.05□□□□□ -1.44
VCAN-203ENST00000343200 POLR2LP62875 67 aaKnown RBP6.05□□□□□ -1.44
VCAN-203ENST00000343200 HTD2P86397 168 aa6.05□□□□□ -1.44
VCAN-203ENST00000343200 ZNF177Q13360 481 aaPredicted RBP6.05□□□□□ -1.44
VCAN-203ENST00000343200 BOP1Q14137 746 aaKnown RBP6.05□□□□□ -1.44
VCAN-203ENST00000343200 SH3RF1Q7Z6J0 888 aa6.05□□□□□ -1.44
VCAN-203ENST00000343200 TRMT2AQ8IZ69 625 aaKnown RBP6.05□□□□□ -1.44
VCAN-203ENST00000343200 SLC7A5P1Q8MH63 180 aa6.05□□□□□ -1.44
VCAN-203ENST00000343200 GDPD1Q8N9F7 314 aa6.05□□□□□ -1.44
VCAN-203ENST00000343200 OR52J3Q8NH60 311 aa6.05□□□□□ -1.44
VCAN-203ENST00000343200 ACOT11Q8WXI4 607 aaPredicted RBP6.05□□□□□ -1.44
VCAN-203ENST00000343200 KIAA1143Q96AT1 154 aaPredicted RBP6.05□□□□□ -1.44
VCAN-203ENST00000343200 ACSF2Q96CM8 615 aaPredicted RBP6.05□□□□□ -1.44
VCAN-203ENST00000343200 PGAP3Q96FM1 320 aaPredicted RBP6.05□□□□□ -1.44
VCAN-203ENST00000343200 LGMNQ99538 433 aa6.05□□□□□ -1.44
VCAN-203ENST00000343200 TMEM39BQ9GZU3 492 aa6.05□□□□□ -1.44
VCAN-203ENST00000343200 DNPEPQ9ULA0 475 aa6.05□□□□□ -1.44
VCAN-203ENST00000343200 ATG4BQ9Y4P1 393 aa6.05□□□□□ -1.44
VCAN-203ENST00000343200 LOC100130705A0A1B0GUX0 176 aa6.05□□□□□ -1.44
VCAN-203ENST00000343200 LRP5LA4QPB2 252 aa6.05□□□□□ -1.44
VCAN-203ENST00000343200 H0YAE9 185 aa6.05□□□□□ -1.44
VCAN-203ENST00000343200 CDRT1O95170 752 aa6.05□□□□□ -1.44
VCAN-203ENST00000343200 UBBP0CG47 229 aa6.05□□□□□ -1.44
VCAN-203ENST00000343200 UBCP0CG48 685 aaKnown RBP6.05□□□□□ -1.44
VCAN-203ENST00000343200 JUPP14923 745 aa6.05□□□□□ -1.44
VCAN-203ENST00000343200 ACO1P21399 889 aaKnown RBP6.05□□□□□ -1.44
VCAN-203ENST00000343200 FBLN1P23142 703 aa6.05□□□□□ -1.44
VCAN-203ENST00000343200 PTPN3P26045 913 aa6.05□□□□□ -1.44
VCAN-203ENST00000343200 MANFP55145 182 aaKnown RBP6.05□□□□□ -1.44
VCAN-203ENST00000343200 RPS27AP62979 156 aaKnown RBP6.05□□□□□ -1.44
VCAN-203ENST00000343200 UBA52P62987 128 aaKnown RBP6.05□□□□□ -1.44
VCAN-203ENST00000343200 LRP8Q14114 963 aa6.05□□□□□ -1.44
VCAN-203ENST00000343200 DSC3Q14574 896 aa6.05□□□□□ -1.44
VCAN-203ENST00000343200 RAB39AQ14964 217 aa6.05□□□□□ -1.44
VCAN-203ENST00000343200 UGT8Q16880 541 aa6.05□□□□□ -1.44
VCAN-203ENST00000343200 MPPE1Q53F39 396 aa6.05□□□□□ -1.44
VCAN-203ENST00000343200 GNASQ5JWF2 1037 aa6.05□□□□□ -1.44
VCAN-203ENST00000343200 ZNF705AQ6ZN79 300 aaPredicted RBP6.05□□□□□ -1.44
VCAN-203ENST00000343200 KCTD9Q7L273 389 aa6.05□□□□□ -1.44
VCAN-203ENST00000343200 OR7D4Q8NG98 312 aa6.05□□□□□ -1.44
VCAN-203ENST00000343200 SHKBP1Q8TBC3 707 aa6.05□□□□□ -1.44
VCAN-203ENST00000343200 SERPINB11Q96P15 392 aa6.05□□□□□ -1.44
VCAN-203ENST00000343200 C12orf57Q99622 126 aa6.05□□□□□ -1.44
VCAN-203ENST00000343200 MECRQ9BV79 373 aa6.05□□□□□ -1.44
VCAN-203ENST00000343200 C1QTNF7Q9BXJ2 289 aa6.05□□□□□ -1.44
VCAN-203ENST00000343200 TFB2MQ9H5Q4 396 aaKnown RBP6.05□□□□□ -1.44
VCAN-203ENST00000343200 A0A096LPI6 279 aa6.05□□□□□ -1.44
VCAN-203ENST00000343200 PRRG1O14668 218 aa6.05□□□□□ -1.44
VCAN-203ENST00000343200 UBXN7O94888 489 aa6.05□□□□□ -1.44
VCAN-203ENST00000343200 PRAMEF12O95522 483 aa6.05□□□□□ -1.44
VCAN-203ENST00000343200 HOXC9P31274 260 aa6.05□□□□□ -1.44
VCAN-203ENST00000343200 DNAJA1P31689 397 aaKnown RBP6.05□□□□□ -1.44
VCAN-203ENST00000343200 GMPRP36959 345 aa6.05□□□□□ -1.44
VCAN-203ENST00000343200 KIR3DL1P43629 444 aa6.05□□□□□ -1.44
VCAN-203ENST00000343200 CLCN5P51795 746 aa6.05□□□□□ -1.44
VCAN-203ENST00000343200 AIF1P55008 147 aa6.05□□□□□ -1.44
VCAN-203ENST00000343200 CSNK2A1P68400 391 aaPredicted RBP6.05□□□□□ -1.44
VCAN-203ENST00000343200 MADCAM1Q13477 382 aa6.05□□□□□ -1.44
VCAN-203ENST00000343200 QRICH1Q2TAL8 776 aa6.05□□□□□ -1.44
VCAN-203ENST00000343200 CSNK2A3Q8NEV1 391 aa6.05□□□□□ -1.44
VCAN-203ENST00000343200 SLC29A1Q99808 456 aa6.05□□□□□ -1.44
VCAN-203ENST00000343200 SACM1LQ9NTJ5 587 aa6.05□□□□□ -1.44
VCAN-203ENST00000343200 DAGLAQ9Y4D2 1042 aa6.05□□□□□ -1.44
VCAN-203ENST00000343200 AP1M2Q9Y6Q5 423 aa6.05□□□□□ -1.44
VCAN-203ENST00000343200 KDM6BO15054 1643 aa6.05□□□□□ -1.44
VCAN-203ENST00000343200 TRAV20A0A0B4J274 112 aa6.05□□□□□ -1.44
VCAN-203ENST00000343200 FUOMA2VDF0 154 aa6.05□□□□□ -1.44
VCAN-203ENST00000343200 ERVV-2B6SEH9 535 aa6.05□□□□□ -1.44
VCAN-203ENST00000343200 M0QYT0 321 aa6.05□□□□□ -1.44
VCAN-203ENST00000343200 FGF10O15520 208 aaPredicted RBP6.05□□□□□ -1.44
VCAN-203ENST00000343200 OR10H2O60403 315 aa6.05□□□□□ -1.44
VCAN-203ENST00000343200 ADAP00813 363 aa6.05□□□□□ -1.44
VCAN-203ENST00000343200 IL3P08700 152 aa6.05□□□□□ -1.44
VCAN-203ENST00000343200 BMP6P22004 513 aa6.05□□□□□ -1.44
VCAN-203ENST00000343200 C2orf80Q0P641 193 aa6.05□□□□□ -1.44
VCAN-203ENST00000343200 PRKD1Q15139 912 aaPredicted RBP6.05□□□□□ -1.44
VCAN-203ENST00000343200 SEC23BQ15437 767 aa6.05□□□□□ -1.44
VCAN-203ENST00000343200 MAPK14Q16539 360 aa6.05□□□□□ -1.44
VCAN-203ENST00000343200 SLC30A6Q6NXT4 461 aa6.05□□□□□ -1.44
VCAN-203ENST00000343200 CCBE1Q6UXH8 406 aaPredicted RBP6.05□□□□□ -1.44
VCAN-203ENST00000343200 C7orf34Q96L11 122 aa6.05□□□□□ -1.44
VCAN-203ENST00000343200 EYA1Q99502 592 aa6.05□□□□□ -1.44
VCAN-203ENST00000343200 CREBZFQ9NS37 354 aa6.05□□□□□ -1.44
VCAN-203ENST00000343200 DDX43Q9NXZ2 648 aaKnown RBP6.05□□□□□ -1.44
VCAN-203ENST00000343200 TAS2R8Q9NYW2 309 aa6.05□□□□□ -1.44
VCAN-203ENST00000343200 AK6Q9Y3D8 172 aaKnown RBP6.05□□□□□ -1.44
VCAN-203ENST00000343200 MYMKA6NI61 221 aa6.05□□□□□ -1.44
VCAN-203ENST00000343200 GTPBP1O00178 669 aaKnown RBP6.05□□□□□ -1.44
VCAN-203ENST00000343200 E2F3O00716 465 aa6.05□□□□□ -1.44
VCAN-203ENST00000343200 PPEF1O14829 653 aaPredicted RBP6.05□□□□□ -1.44
VCAN-203ENST00000343200 TBX3O15119 743 aa6.05□□□□□ -1.44
VCAN-203ENST00000343200 DIRAS1O95057 198 aa6.05□□□□□ -1.44
VCAN-203ENST00000343200 LRATO95237 230 aa6.05□□□□□ -1.44
VCAN-203ENST00000343200 IFNA5P01569 189 aa6.05□□□□□ -1.44
VCAN-203ENST00000343200 HOXD8P13378 290 aaPredicted RBP6.05□□□□□ -1.44
VCAN-203ENST00000343200 GSTM2P28161 218 aa6.05□□□□□ -1.44
Retrieved 100 of 20,778 RNA–protein pairs in 24.1 ms