RNA–Protein interactions for RNA: ENST00000339488.8

PTCHD4-201, Transcript of patched domain containing 4, humanhuman

APPRIS P1 TSL 2 BASIC

Gene PTCHD4, Length 2,850 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCHD4-201ENST00000339488 RRN3P2A6NIE6 340 aa9.44□□□□□ -0.9
PTCHD4-201ENST00000339488 TREHO43280 583 aa9.44□□□□□ -0.9
PTCHD4-201ENST00000339488 CDH8P55286 799 aa9.44□□□□□ -0.9
PTCHD4-201ENST00000339488 BCAR1P56945 870 aa9.44□□□□□ -0.9
PTCHD4-201ENST00000339488 RAB14P61106 215 aa9.44□□□□□ -0.9
PTCHD4-201ENST00000339488 RRAS2P62070 204 aaPredicted RBP9.44□□□□□ -0.9
PTCHD4-201ENST00000339488 SPP2Q13103 211 aa9.44□□□□□ -0.9
PTCHD4-201ENST00000339488 RFX4Q33E94 735 aa9.44□□□□□ -0.9
PTCHD4-201ENST00000339488 RUNDC3AQ59EK9 446 aa9.44□□□□□ -0.9
PTCHD4-201ENST00000339488 PAGE3Q5JUK9 113 aa9.44□□□□□ -0.9
PTCHD4-201ENST00000339488 CLLU1Q5K131 121 aa9.44□□□□□ -0.9
PTCHD4-201ENST00000339488 PRAMEF19Q5SWL8 479 aa9.44□□□□□ -0.9
PTCHD4-201ENST00000339488 TMPRSS11AQ6ZMR5 421 aa9.44□□□□□ -0.9
PTCHD4-201ENST00000339488 KANSL1Q7Z3B3 1105 aa9.44□□□□□ -0.9
PTCHD4-201ENST00000339488 SLC51AQ86UW1 340 aa9.44□□□□□ -0.9
PTCHD4-201ENST00000339488 RIMKLAQ8IXN7 391 aa9.44□□□□□ -0.9
PTCHD4-201ENST00000339488 PHF21BQ96EK2 531 aa9.44□□□□□ -0.9
PTCHD4-201ENST00000339488 NSMCE2Q96MF7 247 aa9.44□□□□□ -0.9
PTCHD4-201ENST00000339488 SERPINB11Q96P15 392 aa9.44□□□□□ -0.9
PTCHD4-201ENST00000339488 RBBP8Q99708 897 aa9.44□□□□□ -0.9
PTCHD4-201ENST00000339488 RTP3Q9BQQ7 232 aa9.44□□□□□ -0.9
PTCHD4-201ENST00000339488 CRB3Q9BUF7 120 aa9.44□□□□□ -0.9
PTCHD4-201ENST00000339488 DUSP21Q9H596 190 aa9.44□□□□□ -0.9
PTCHD4-201ENST00000339488 ASH2LQ9UBL3 628 aa9.44□□□□□ -0.9
PTCHD4-201ENST00000339488 TPRKBQ9Y3C4 175 aa9.44□□□□□ -0.9
PTCHD4-201ENST00000339488 COL4A1P02462 1669 aa9.44□□□□□ -0.9
PTCHD4-201ENST00000339488 FFAR3O14843 346 aa9.43□□□□□ -0.9
PTCHD4-201ENST00000339488 GPR42O15529 346 aa9.43□□□□□ -0.9
PTCHD4-201ENST00000339488 PSIP1O75475 530 aaKnown RBP9.43□□□□□ -0.9
PTCHD4-201ENST00000339488 WBP4O75554 376 aaKnown RBP9.43□□□□□ -0.9
PTCHD4-201ENST00000339488 GRAP2O75791 330 aa9.43□□□□□ -0.9
PTCHD4-201ENST00000339488 EGFP01133 1207 aa9.43□□□□□ -0.9
PTCHD4-201ENST00000339488 ITGB1P05556 798 aa9.43□□□□□ -0.9
PTCHD4-201ENST00000339488 MTPNP58546 118 aa9.43□□□□□ -0.9
PTCHD4-201ENST00000339488 SSTP61278 116 aa9.43□□□□□ -0.9
PTCHD4-201ENST00000339488 SCN1BQ07699 218 aa9.43□□□□□ -0.9
PTCHD4-201ENST00000339488 BAMBIQ13145 260 aa9.43□□□□□ -0.9
PTCHD4-201ENST00000339488 ADAM15Q13444 863 aa9.43□□□□□ -0.9
PTCHD4-201ENST00000339488 ALKBH1Q13686 389 aaKnown RBP9.43□□□□□ -0.9
PTCHD4-201ENST00000339488 PIGHQ14442 188 aaPredicted RBP9.43□□□□□ -0.9
PTCHD4-201ENST00000339488 HSD17B12Q53GQ0 312 aa9.43□□□□□ -0.9
PTCHD4-201ENST00000339488 SCARA5Q6ZMJ2 495 aa9.43□□□□□ -0.9
PTCHD4-201ENST00000339488 Q6ZPB1 254 aaPredicted RBP9.43□□□□□ -0.9
PTCHD4-201ENST00000339488 CCDC149Q6ZUS6 474 aa9.43□□□□□ -0.9
PTCHD4-201ENST00000339488 HTR3DQ70Z44 454 aa9.43□□□□□ -0.9
PTCHD4-201ENST00000339488 KIAA0907Q7Z7F0 614 aaPredicted RBP9.43□□□□□ -0.9
PTCHD4-201ENST00000339488 CLEC14AQ86T13 490 aa9.43□□□□□ -0.9
PTCHD4-201ENST00000339488 CYP4Z1Q86W10 505 aa9.43□□□□□ -0.9
PTCHD4-201ENST00000339488 TMEM132CQ8N3T6 1108 aa9.43□□□□□ -0.9
PTCHD4-201ENST00000339488 CERS5Q8N5B7 392 aa9.43□□□□□ -0.9
PTCHD4-201ENST00000339488 PNPLA1Q8N8W4 532 aa9.43□□□□□ -0.9
PTCHD4-201ENST00000339488 KBTBD8Q8NFY9 601 aa9.43□□□□□ -0.9
PTCHD4-201ENST00000339488 SETD6Q8TBK2 473 aa9.43□□□□□ -0.9
PTCHD4-201ENST00000339488 IPCEF1Q8WWN9 437 aaPredicted RBP9.43□□□□□ -0.9
PTCHD4-201ENST00000339488 ARNTL2Q8WYA1 636 aa9.43□□□□□ -0.9
PTCHD4-201ENST00000339488 BSNDQ8WZ55 320 aa9.43□□□□□ -0.9
PTCHD4-201ENST00000339488 TUBGCP3Q96CW5 907 aa9.43□□□□□ -0.9
PTCHD4-201ENST00000339488 PDLIM5Q96HC4 596 aaKnown RBP9.43□□□□□ -0.9
PTCHD4-201ENST00000339488 HYLS1Q96M11 299 aa9.43□□□□□ -0.9
PTCHD4-201ENST00000339488 QRFPRQ96P65 431 aa9.43□□□□□ -0.9
PTCHD4-201ENST00000339488 CMSS1Q9BQ75 279 aaKnown RBP9.43□□□□□ -0.9
PTCHD4-201ENST00000339488 FAM213AQ9BRX8 229 aa9.43□□□□□ -0.9
PTCHD4-201ENST00000339488 REG4Q9BYZ8 158 aa9.43□□□□□ -0.9
PTCHD4-201ENST00000339488 NSMCE4AQ9NXX6 385 aa9.43□□□□□ -0.9
PTCHD4-201ENST00000339488 SCN3BQ9NY72 215 aa9.43□□□□□ -0.9
PTCHD4-201ENST00000339488 STAP1Q9ULZ2 295 aa9.43□□□□□ -0.9
PTCHD4-201ENST00000339488 DERAQ9Y315 318 aa9.43□□□□□ -0.9
PTCHD4-201ENST00000339488 PCDHA9Q9Y5H5 950 aa9.43□□□□□ -0.9
PTCHD4-201ENST00000339488 PTPRJQ12913 1337 aa9.43□□□□□ -0.9
PTCHD4-201ENST00000339488 KIAA1551Q9HCM1 1747 aa9.43□□□□□ -0.9
PTCHD4-201ENST00000339488 NPHS1O60500 1241 aa9.43□□□□□ -0.9
PTCHD4-201ENST00000339488 EIF1BO60739 113 aaKnown RBP9.43□□□□□ -0.9
PTCHD4-201ENST00000339488 MLYCDO95822 493 aa9.43□□□□□ -0.9
PTCHD4-201ENST00000339488 RPLP0P05388 317 aaKnown RBP9.43□□□□□ -0.9
PTCHD4-201ENST00000339488 POU3F2P20265 443 aaPredicted RBP9.43□□□□□ -0.9
PTCHD4-201ENST00000339488 GPX3P22352 226 aa9.43□□□□□ -0.9
PTCHD4-201ENST00000339488 CHMP24386 653 aa9.43□□□□□ -0.9
PTCHD4-201ENST00000339488 SDC4P31431 198 aa9.43□□□□□ -0.9
PTCHD4-201ENST00000339488 EIF1P41567 113 aaKnown RBP9.43□□□□□ -0.9
PTCHD4-201ENST00000339488 POU3F4P49335 361 aa9.43□□□□□ -0.9
PTCHD4-201ENST00000339488 GMPSP49915 693 aaPredicted RBP9.43□□□□□ -0.9
PTCHD4-201ENST00000339488 SOX10P56693 466 aa9.43□□□□□ -0.9
PTCHD4-201ENST00000339488 DEFA5Q01523 94 aa9.43□□□□□ -0.9
PTCHD4-201ENST00000339488 CUL2Q13617 745 aa9.43□□□□□ -0.9
PTCHD4-201ENST00000339488 DOC2BQ14184 412 aa9.43□□□□□ -0.9
PTCHD4-201ENST00000339488 FRG1Q14331 258 aaKnown RBP9.43□□□□□ -0.9
PTCHD4-201ENST00000339488 WSCD2Q2TBF2 565 aa9.43□□□□□ -0.9
PTCHD4-201ENST00000339488 CYHR1Q6ZMK1 362 aa9.43□□□□□ -0.9
PTCHD4-201ENST00000339488 GPRIN3Q6ZVF9 776 aa9.43□□□□□ -0.9
PTCHD4-201ENST00000339488 SLC41A1Q8IVJ1 513 aa9.43□□□□□ -0.9
PTCHD4-201ENST00000339488 DTWD1Q8N5C7 304 aa9.43□□□□□ -0.9
PTCHD4-201ENST00000339488 SRFBP1Q8NEF9 429 aaKnown RBP9.43□□□□□ -0.9
PTCHD4-201ENST00000339488 ITFG1Q8TB96 612 aa9.43□□□□□ -0.9
PTCHD4-201ENST00000339488 ZNF606Q8WXB4 792 aa9.43□□□□□ -0.9
PTCHD4-201ENST00000339488 EXOSC8Q96B26 276 aaKnown RBP9.43□□□□□ -0.9
PTCHD4-201ENST00000339488 TEX37Q96LM6 180 aa9.43□□□□□ -0.9
PTCHD4-201ENST00000339488 ACCSQ96QU6 501 aa9.43□□□□□ -0.9
PTCHD4-201ENST00000339488 MAP3K3Q99759 626 aa9.43□□□□□ -0.9
PTCHD4-201ENST00000339488 BARHL1Q9BZE3 327 aa9.43□□□□□ -0.9
PTCHD4-201ENST00000339488 SLC19A3Q9BZV2 496 aa9.43□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 35 ms