RNA–Protein interactions for RNA: ENST00000339430.9

LITAF-201, Transcript of lipopolysaccharide induced TNF factor, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LITAF, Length 2,356 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LITAF-201ENST00000339430 PDE10AQ9Y233 779 aa15.9■□□□□ 0.14
LITAF-201ENST00000339430 DLGAP4Q9Y2H0 992 aa15.9■□□□□ 0.14
LITAF-201ENST00000339430 NUP214P35658 2090 aaPredicted RBP15.89■□□□□ 0.13
LITAF-201ENST00000339430 MTX2O75431 263 aa15.89■□□□□ 0.13
LITAF-201ENST00000339430 UGT2B4P06133 528 aa15.89■□□□□ 0.13
LITAF-201ENST00000339430 BCKDHAP12694 445 aa15.89■□□□□ 0.13
LITAF-201ENST00000339430 ELK4P28324 431 aa15.89■□□□□ 0.13
LITAF-201ENST00000339430 CSNK1DP48730 415 aa15.89■□□□□ 0.13
LITAF-201ENST00000339430 RGS19P49795 217 aa15.89■□□□□ 0.13
LITAF-201ENST00000339430 SNRPD1P62314 119 aaKnown RBP15.89■□□□□ 0.13
LITAF-201ENST00000339430 PMS2P3Q13401 168 aa15.89■□□□□ 0.13
LITAF-201ENST00000339430 USP39Q53GS9 565 aaKnown RBP15.89■□□□□ 0.13
LITAF-201ENST00000339430 LY6G5CQ5SRR4 150 aa15.89■□□□□ 0.13
LITAF-201ENST00000339430 ERI1Q8IV48 349 aaKnown RBP15.89■□□□□ 0.13
LITAF-201ENST00000339430 SLC22A15Q8IZD6 547 aa15.89■□□□□ 0.13
LITAF-201ENST00000339430 HS3ST5Q8IZT8 346 aa15.89■□□□□ 0.13
LITAF-201ENST00000339430 C10orf111Q8N326 155 aa15.89■□□□□ 0.13
LITAF-201ENST00000339430 UBTD2Q8WUN7 234 aa15.89■□□□□ 0.13
LITAF-201ENST00000339430 MYLIPQ8WY64 445 aa15.89■□□□□ 0.13
LITAF-201ENST00000339430 SMARCD2Q92925 531 aa15.89■□□□□ 0.13
LITAF-201ENST00000339430 FAM162AQ96A26 154 aa15.89■□□□□ 0.13
LITAF-201ENST00000339430 CLMPQ9H6B4 373 aa15.89■□□□□ 0.13
LITAF-201ENST00000339430 RDH14Q9HBH5 336 aa15.89■□□□□ 0.13
LITAF-201ENST00000339430 LTB4R2Q9NPC1 389 aa15.89■□□□□ 0.13
LITAF-201ENST00000339430 C1orf109Q9NX04 203 aa15.89■□□□□ 0.13
LITAF-201ENST00000339430 INVSQ9Y283 1065 aa15.89■□□□□ 0.13
LITAF-201ENST00000339430 TRIM64CA6NLI5 447 aa15.89■□□□□ 0.13
LITAF-201ENST00000339430 HLA-FP30511 346 aa15.89■□□□□ 0.13
LITAF-201ENST00000339430 BOP1Q14137 746 aaKnown RBP15.89■□□□□ 0.13
LITAF-201ENST00000339430 ANKRD34AQ69YU3 496 aa15.89■□□□□ 0.13
LITAF-201ENST00000339430 VRK3Q8IV63 474 aa15.89■□□□□ 0.13
LITAF-201ENST00000339430 CBARPQ8N350 705 aaPredicted RBP15.89■□□□□ 0.13
LITAF-201ENST00000339430 SELENOMQ8WWX9 145 aa15.89■□□□□ 0.13
LITAF-201ENST00000339430 USP7Q93009 1102 aa15.89■□□□□ 0.13
LITAF-201ENST00000339430 NCLNQ969V3 563 aa15.89■□□□□ 0.13
LITAF-201ENST00000339430 ISOC1Q96CN7 298 aa15.89■□□□□ 0.13
LITAF-201ENST00000339430 SCRN2Q96FV2 425 aa15.89■□□□□ 0.13
LITAF-201ENST00000339430 SUV39H2Q9H5I1 410 aa15.89■□□□□ 0.13
LITAF-201ENST00000339430 SMURF2Q9HAU4 748 aa15.89■□□□□ 0.13
LITAF-201ENST00000339430 CLDND1Q9NY35 253 aa15.89■□□□□ 0.13
LITAF-201ENST00000339430 FAM8A1Q9UBU6 413 aa15.89■□□□□ 0.13
LITAF-201ENST00000339430 NUP210Q8TEM1 1887 aaPredicted RBP15.88■□□□□ 0.13
LITAF-201ENST00000339430 ELOVL7A1L3X0 281 aa15.88■□□□□ 0.13
LITAF-201ENST00000339430 NOBOXO60393 691 aa15.88■□□□□ 0.13
LITAF-201ENST00000339430 WDR47O94967 919 aa15.88■□□□□ 0.13
LITAF-201ENST00000339430 LRATO95237 230 aa15.88■□□□□ 0.13
LITAF-201ENST00000339430 IL6P05231 212 aa15.88■□□□□ 0.13
LITAF-201ENST00000339430 WEE1P30291 646 aa15.88■□□□□ 0.13
LITAF-201ENST00000339430 SHMT2P34897 504 aa15.88■□□□□ 0.13
LITAF-201ENST00000339430 ALDH3A2P51648 485 aa15.88■□□□□ 0.13
LITAF-201ENST00000339430 PHC1P78364 1004 aa15.88■□□□□ 0.13
LITAF-201ENST00000339430 DAG1Q14118 895 aa15.88■□□□□ 0.13
LITAF-201ENST00000339430 NEDD8Q15843 81 aa15.88■□□□□ 0.13
LITAF-201ENST00000339430 LRIT3Q3SXY7 679 aa15.88■□□□□ 0.13
LITAF-201ENST00000339430 ZBED5Q49AG3 693 aa15.88■□□□□ 0.13
LITAF-201ENST00000339430 ATAT1Q5SQI0 421 aa15.88■□□□□ 0.13
LITAF-201ENST00000339430 USP51Q70EK9 711 aa15.88■□□□□ 0.13
LITAF-201ENST00000339430 USP45Q70EL2 814 aa15.88■□□□□ 0.13
LITAF-201ENST00000339430 OR10Q1Q8NGQ4 319 aa15.88■□□□□ 0.13
LITAF-201ENST00000339430 GFM2Q969S9 779 aaKnown RBP15.88■□□□□ 0.13
LITAF-201ENST00000339430 SLC47A1Q96FL8 570 aa15.88■□□□□ 0.13
LITAF-201ENST00000339430 TSSK3Q96PN8 268 aa15.88■□□□□ 0.13
LITAF-201ENST00000339430 DCUN1D5Q9BTE7 237 aa15.88■□□□□ 0.13
LITAF-201ENST00000339430 SLC32A1Q9H598 525 aa15.88■□□□□ 0.13
LITAF-201ENST00000339430 POLR1BQ9H9Y6 1135 aa15.88■□□□□ 0.13
LITAF-201ENST00000339430 GDE1Q9NZC3 331 aa15.88■□□□□ 0.13
LITAF-201ENST00000339430 PKD2L2Q9NZM6 624 aa15.88■□□□□ 0.13
LITAF-201ENST00000339430 ATXN10Q9UBB4 475 aa15.88■□□□□ 0.13
LITAF-201ENST00000339430 PCDHB14Q9Y5E9 798 aa15.88■□□□□ 0.13
LITAF-201ENST00000339430 AGAP14A8MT82 685 aa15.87■□□□□ 0.13
LITAF-201ENST00000339430 TMX2-CTNND1H3BSU7 103 aa15.87■□□□□ 0.13
LITAF-201ENST00000339430 CXCR6O00574 342 aa15.87■□□□□ 0.13
LITAF-201ENST00000339430 SLC9A3R1O14745 358 aaPredicted RBP15.87■□□□□ 0.13
LITAF-201ENST00000339430 PRKD3O94806 890 aa15.87■□□□□ 0.13
LITAF-201ENST00000339430 CST1P01037 141 aa15.87■□□□□ 0.13
LITAF-201ENST00000339430 TYRP14679 529 aa15.87■□□□□ 0.13
LITAF-201ENST00000339430 RPS14P62263 151 aaKnown RBP15.87■□□□□ 0.13
LITAF-201ENST00000339430 RUNDC3AQ59EK9 446 aa15.87■□□□□ 0.13
LITAF-201ENST00000339430 CES5AQ6NT32 575 aa15.87■□□□□ 0.13
LITAF-201ENST00000339430 C22orf39Q6P5X5 142 aa15.87■□□□□ 0.13
LITAF-201ENST00000339430 DPY19L3Q6ZPD9 716 aa15.87■□□□□ 0.13
LITAF-201ENST00000339430 KCTD8Q6ZWB6 473 aa15.87■□□□□ 0.13
LITAF-201ENST00000339430 ARHGAP22Q7Z5H3 698 aa15.87■□□□□ 0.13
LITAF-201ENST00000339430 ALDH16A1Q8IZ83 802 aa15.87■□□□□ 0.13
LITAF-201ENST00000339430 RNF175Q8N4F7 328 aa15.87■□□□□ 0.13
LITAF-201ENST00000339430 C12orf43Q96C57 262 aaKnown RBP15.87■□□□□ 0.13
LITAF-201ENST00000339430 OTUB2Q96DC9 234 aa15.87■□□□□ 0.13
LITAF-201ENST00000339430 INPP5KQ9BT40 448 aa15.87■□□□□ 0.13
LITAF-201ENST00000339430 UGT2B28Q9BY64 529 aa15.87■□□□□ 0.13
LITAF-201ENST00000339430 GORASP2Q9H8Y8 452 aa15.87■□□□□ 0.13
LITAF-201ENST00000339430 PARVBQ9HBI1 364 aa15.87■□□□□ 0.13
LITAF-201ENST00000339430 HPS4Q9NQG7 708 aa15.87■□□□□ 0.13
LITAF-201ENST00000339430 ETAA1Q9NY74 926 aa15.87■□□□□ 0.13
LITAF-201ENST00000339430 LMCD1Q9NZU5 365 aa15.87■□□□□ 0.13
LITAF-201ENST00000339430 SLCO3A1Q9UIG8 710 aa15.87■□□□□ 0.13
LITAF-201ENST00000339430 MTCH2Q9Y6C9 303 aa15.87■□□□□ 0.13
LITAF-201ENST00000339430 TRIM64A6NGJ6 449 aa15.87■□□□□ 0.13
LITAF-201ENST00000339430 G3V2T6 193 aa15.87■□□□□ 0.13
LITAF-201ENST00000339430 KRT6AP02538 564 aa15.87■□□□□ 0.13
LITAF-201ENST00000339430 KRT6BP04259 564 aa15.87■□□□□ 0.13
Retrieved 100 of 20,778 RNA–protein pairs in 33.1 ms