RNA–Protein interactions for RNA: ENST00000338850.5

RTN3-201, Transcript of reticulon 3, humanhuman

TSL 2

Gene RTN3, Length 493 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTN3-201ENST00000338850 HJURPQ8NCD3 748 aaPredicted RBP10.53□□□□□ -0.72
RTN3-201ENST00000338850 ZNF548Q8NEK5 533 aaPredicted RBP10.53□□□□□ -0.72
RTN3-201ENST00000338850 DNAJB14Q8TBM8 379 aa10.53□□□□□ -0.72
RTN3-201ENST00000338850 METTL6Q8TCB7 284 aa10.53□□□□□ -0.72
RTN3-201ENST00000338850 SLC13A3Q8WWT9 602 aa10.53□□□□□ -0.72
RTN3-201ENST00000338850 USP7Q93009 1102 aa10.53□□□□□ -0.72
RTN3-201ENST00000338850 BORCS5Q969J3 196 aa10.53□□□□□ -0.72
RTN3-201ENST00000338850 VPS33AQ96AX1 596 aa10.53□□□□□ -0.72
RTN3-201ENST00000338850 C12orf43Q96C57 262 aaKnown RBP10.53□□□□□ -0.72
RTN3-201ENST00000338850 METTL2AQ96IZ6 378 aaKnown RBP10.53□□□□□ -0.72
RTN3-201ENST00000338850 TEX37Q96LM6 180 aa10.53□□□□□ -0.72
RTN3-201ENST00000338850 HHIPQ96QV1 700 aa10.53□□□□□ -0.72
RTN3-201ENST00000338850 CHID1Q9BWS9 393 aa10.53□□□□□ -0.72
RTN3-201ENST00000338850 KLF16Q9BXK1 252 aaPredicted RBP10.53□□□□□ -0.72
RTN3-201ENST00000338850 GABARAPL1Q9H0R8 117 aa10.53□□□□□ -0.72
RTN3-201ENST00000338850 GPN2Q9H9Y4 310 aaPredicted RBP10.53□□□□□ -0.72
RTN3-201ENST00000338850 CXorf21Q9HAI6 301 aa10.53□□□□□ -0.72
RTN3-201ENST00000338850 NTN4Q9HB63 628 aa10.53□□□□□ -0.72
RTN3-201ENST00000338850 HPS4Q9NQG7 708 aa10.53□□□□□ -0.72
RTN3-201ENST00000338850 INTS7Q9NVH2 962 aaKnown RBP10.53□□□□□ -0.72
RTN3-201ENST00000338850 NCDNQ9UBB6 729 aa10.53□□□□□ -0.72
RTN3-201ENST00000338850 GIMAP2Q9UG22 337 aa10.53□□□□□ -0.72
RTN3-201ENST00000338850 ZMYM5Q9UJ78 669 aa10.53□□□□□ -0.72
RTN3-201ENST00000338850 ERVW-1Q9UQF0 538 aa10.53□□□□□ -0.72
RTN3-201ENST00000338850 TIMM22Q9Y584 194 aa10.53□□□□□ -0.72
RTN3-201ENST00000338850 PCDHGA11Q9Y5H2 935 aa10.53□□□□□ -0.72
RTN3-201ENST00000338850 SLC30A1Q9Y6M5 507 aa10.53□□□□□ -0.72
RTN3-201ENST00000338850 HSPE1-MOB4S4R3N1 261 aa10.53□□□□□ -0.72
RTN3-201ENST00000338850 NUP210Q8TEM1 1887 aaPredicted RBP10.53□□□□□ -0.72
RTN3-201ENST00000338850 HELZP42694 1942 aaKnown RBP10.52□□□□□ -0.72
RTN3-201ENST00000338850 OR7A17O14581 309 aa10.52□□□□□ -0.73
RTN3-201ENST00000338850 DPM1O60762 260 aa10.52□□□□□ -0.73
RTN3-201ENST00000338850 NOL3O60936 208 aaKnown RBP10.52□□□□□ -0.73
RTN3-201ENST00000338850 ABCB7O75027 752 aa10.52□□□□□ -0.73
RTN3-201ENST00000338850 GJB3O75712 270 aa10.52□□□□□ -0.73
RTN3-201ENST00000338850 PGLSO95336 258 aa10.52□□□□□ -0.73
RTN3-201ENST00000338850 CD160O95971 181 aa10.52□□□□□ -0.73
RTN3-201ENST00000338850 CAPN1P07384 714 aa10.52□□□□□ -0.73
RTN3-201ENST00000338850 GNAO1P09471 354 aa10.52□□□□□ -0.73
RTN3-201ENST00000338850 MBL2P11226 248 aaPredicted RBP10.52□□□□□ -0.73
RTN3-201ENST00000338850 ZNF12P17014 697 aa10.52□□□□□ -0.73
RTN3-201ENST00000338850 ITGALP20701 1170 aa10.52□□□□□ -0.73
RTN3-201ENST00000338850 GSTM2P28161 218 aa10.52□□□□□ -0.73
RTN3-201ENST00000338850 GGT5P36269 586 aa10.52□□□□□ -0.73
RTN3-201ENST00000338850 CXCL12P48061 93 aa10.52□□□□□ -0.73
RTN3-201ENST00000338850 AGTR2P50052 363 aa10.52□□□□□ -0.73
RTN3-201ENST00000338850 OR4D2P58180 307 aa10.52□□□□□ -0.73
RTN3-201ENST00000338850 PPP2R2BQ00005 443 aa10.52□□□□□ -0.73
RTN3-201ENST00000338850 BOP1Q14137 746 aaKnown RBP10.52□□□□□ -0.73
RTN3-201ENST00000338850 ZNF829Q3KNS6 432 aaPredicted RBP10.52□□□□□ -0.73
RTN3-201ENST00000338850 TTLL9Q3SXZ7 439 aa10.52□□□□□ -0.73
RTN3-201ENST00000338850 DGKKQ5KSL6 1271 aa10.52□□□□□ -0.73
RTN3-201ENST00000338850 ZDHHC20Q5W0Z9 365 aa10.52□□□□□ -0.73
RTN3-201ENST00000338850 Q6ZNX1 250 aa10.52□□□□□ -0.73
RTN3-201ENST00000338850 Q6ZS52 159 aa10.52□□□□□ -0.73
RTN3-201ENST00000338850 THAP5Q7Z6K1 395 aa10.52□□□□□ -0.73
RTN3-201ENST00000338850 CALHM3Q86XJ0 350 aa10.52□□□□□ -0.73
RTN3-201ENST00000338850 CLVS1Q8IUQ0 354 aaPredicted RBP10.52□□□□□ -0.73
RTN3-201ENST00000338850 EID3Q8N140 333 aa10.52□□□□□ -0.73
RTN3-201ENST00000338850 SNX31Q8N9S9 440 aa10.52□□□□□ -0.73
RTN3-201ENST00000338850 OR4F6Q8NGB9 312 aa10.52□□□□□ -0.73
RTN3-201ENST00000338850 RAB2BQ8WUD1 216 aa10.52□□□□□ -0.73
RTN3-201ENST00000338850 FBLIM1Q8WUP2 373 aa10.52□□□□□ -0.73
RTN3-201ENST00000338850 EEF1AKMT1Q8WVE0 214 aa10.52□□□□□ -0.73
RTN3-201ENST00000338850 TMIGD2Q96BF3 282 aa10.52□□□□□ -0.73
RTN3-201ENST00000338850 SDCCAG3Q96C92 435 aa10.52□□□□□ -0.73
RTN3-201ENST00000338850 MYO19Q96H55 970 aa10.52□□□□□ -0.73
RTN3-201ENST00000338850 ZNF583Q96ND8 569 aa10.52□□□□□ -0.73
RTN3-201ENST00000338850 RBM4BQ9BQ04 359 aaKnown RBP10.52□□□□□ -0.73
RTN3-201ENST00000338850 FAM83CQ9BQN1 747 aa10.52□□□□□ -0.73
RTN3-201ENST00000338850 RBM4Q9BWF3 364 aaKnown RBP10.52□□□□□ -0.73
RTN3-201ENST00000338850 CLPBQ9H078 707 aa10.52□□□□□ -0.73
RTN3-201ENST00000338850 MUC3BQ9H195 1237 aa10.52□□□□□ -0.73
RTN3-201ENST00000338850 OCEL1Q9H607 264 aa10.52□□□□□ -0.73
RTN3-201ENST00000338850 CLMPQ9H6B4 373 aa10.52□□□□□ -0.73
RTN3-201ENST00000338850 IL1RL2Q9HB29 575 aa10.52□□□□□ -0.73
RTN3-201ENST00000338850 GKN1Q9NS71 199 aa10.52□□□□□ -0.73
RTN3-201ENST00000338850 THG1LQ9NWX6 298 aaKnown RBP10.52□□□□□ -0.73
RTN3-201ENST00000338850 IFT80Q9P2H3 777 aaPredicted RBP10.52□□□□□ -0.73
RTN3-201ENST00000338850 GMPR2Q9P2T1 348 aaKnown RBP10.52□□□□□ -0.73
RTN3-201ENST00000338850 GALPQ9UBC7 116 aa10.52□□□□□ -0.73
RTN3-201ENST00000338850 CCL26Q9Y258 94 aa10.52□□□□□ -0.73
RTN3-201ENST00000338850 B3GNT3Q9Y2A9 372 aa10.52□□□□□ -0.73
RTN3-201ENST00000338850 TMED5Q9Y3A6 229 aa10.52□□□□□ -0.73
RTN3-201ENST00000338850 PCDHGB1Q9Y5G3 927 aa10.52□□□□□ -0.73
RTN3-201ENST00000338850 OR51B4Q9Y5P0 310 aa10.52□□□□□ -0.73
RTN3-201ENST00000338850 PIKFYVEQ9Y2I7 2098 aa10.52□□□□□ -0.73
RTN3-201ENST00000338850 DMXL1Q9Y485 3027 aa10.52□□□□□ -0.73
RTN3-201ENST00000338850 SOBPA7XYQ1 873 aa10.51□□□□□ -0.73
RTN3-201ENST00000338850 H3BMQ9 156 aa10.51□□□□□ -0.73
RTN3-201ENST00000338850 K7EPI3 171 aa10.51□□□□□ -0.73
RTN3-201ENST00000338850 K7ESF4 209 aa10.51□□□□□ -0.73
RTN3-201ENST00000338850 COCHO43405 550 aa10.51□□□□□ -0.73
RTN3-201ENST00000338850 PRMT3O60678 531 aa10.51□□□□□ -0.73
RTN3-201ENST00000338850 CBFA2T3O75081 653 aa10.51□□□□□ -0.73
RTN3-201ENST00000338850 RSL1D1O76021 490 aaKnown RBP10.51□□□□□ -0.73
RTN3-201ENST00000338850 RECQL5O94762 991 aaPredicted RBP10.51□□□□□ -0.73
RTN3-201ENST00000338850 FKBP9O95302 570 aa10.51□□□□□ -0.73
RTN3-201ENST00000338850 OLFM2O95897 454 aa10.51□□□□□ -0.73
RTN3-201ENST00000338850 HMBSP08397 361 aa10.51□□□□□ -0.73
Retrieved 100 of 20,778 RNA–protein pairs in 30.1 ms