RNA–Protein interactions for RNA: ENST00000334944.9

SF1-202, Transcript of splicing factor 1, humanhuman

TSL 1 (best) BASIC

Gene SF1, Length 3,094 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF1-202ENST00000334944 BBS7Q8IWZ6 715 aa13.56□□□□□ -0.24
SF1-202ENST00000334944 SYTL1Q8IYJ3 562 aa13.56□□□□□ -0.24
SF1-202ENST00000334944 HS3ST5Q8IZT8 346 aa13.56□□□□□ -0.24
SF1-202ENST00000334944 STON2Q8WXE9 905 aa13.56□□□□□ -0.24
SF1-202ENST00000334944 BIRC7Q96CA5 298 aa13.56□□□□□ -0.24
SF1-202ENST00000334944 EGFL8Q99944 293 aa13.56□□□□□ -0.24
SF1-202ENST00000334944 TOR3AQ9H497 397 aa13.56□□□□□ -0.24
SF1-202ENST00000334944 ZFC3H1O60293 1989 aaKnown RBP13.56□□□□□ -0.24
SF1-202ENST00000334944 XPNPEP2O43895 674 aa13.56□□□□□ -0.24
SF1-202ENST00000334944 SLC25A14O95258 325 aaPredicted RBP13.56□□□□□ -0.24
SF1-202ENST00000334944 HOXB8P17481 243 aaPredicted RBP13.56□□□□□ -0.24
SF1-202ENST00000334944 GABRR2P28476 465 aa13.56□□□□□ -0.24
SF1-202ENST00000334944 CD70P32970 193 aa13.56□□□□□ -0.24
SF1-202ENST00000334944 MAP2K4P45985 399 aa13.56□□□□□ -0.24
SF1-202ENST00000334944 INPP5AQ14642 412 aa13.56□□□□□ -0.24
SF1-202ENST00000334944 TRIM60Q495X7 471 aa13.56□□□□□ -0.24
SF1-202ENST00000334944 C6orf136Q5SQH8 315 aa13.56□□□□□ -0.24
SF1-202ENST00000334944 FKBP9P1Q75LS8 142 aa13.56□□□□□ -0.24
SF1-202ENST00000334944 CHST9Q7L1S5 443 aa13.56□□□□□ -0.24
SF1-202ENST00000334944 OR4F6Q8NGB9 312 aa13.56□□□□□ -0.24
SF1-202ENST00000334944 IL26Q9NPH9 171 aa13.56□□□□□ -0.24
SF1-202ENST00000334944 TESMINQ9Y4I5 508 aa13.56□□□□□ -0.24
SF1-202ENST00000334944 PCDHB3Q9Y5E6 796 aa13.56□□□□□ -0.24
SF1-202ENST00000334944 NUP214P35658 2090 aaPredicted RBP13.56□□□□□ -0.24
SF1-202ENST00000334944 CCDC154A6NI56 674 aa13.55□□□□□ -0.24
SF1-202ENST00000334944 PITPNM1O00562 1244 aa13.55□□□□□ -0.24
SF1-202ENST00000334944 PRMT5O14744 637 aaPredicted RBP13.55□□□□□ -0.24
SF1-202ENST00000334944 ARPC2O15144 300 aa13.55□□□□□ -0.24
SF1-202ENST00000334944 NOBOXO60393 691 aa13.55□□□□□ -0.24
SF1-202ENST00000334944 G6PDP11413 515 aa13.55□□□□□ -0.24
SF1-202ENST00000334944 CRHBPP24387 322 aa13.55□□□□□ -0.24
SF1-202ENST00000334944 HNF1BP35680 557 aa13.55□□□□□ -0.24
SF1-202ENST00000334944 ABRAXAS2Q15018 415 aa13.55□□□□□ -0.24
SF1-202ENST00000334944 NR6A1Q15406 480 aa13.55□□□□□ -0.24
SF1-202ENST00000334944 TXNDC11Q6PKC3 985 aa13.55□□□□□ -0.24
SF1-202ENST00000334944 LYSMD2Q8IV50 215 aa13.55□□□□□ -0.24
SF1-202ENST00000334944 CLEC4FQ8N1N0 589 aa13.55□□□□□ -0.24
SF1-202ENST00000334944 OR56A4Q8NGH8 313 aa13.55□□□□□ -0.24
SF1-202ENST00000334944 PIH1D2Q8WWB5 315 aa13.55□□□□□ -0.24
SF1-202ENST00000334944 KCNJ9Q92806 393 aa13.55□□□□□ -0.24
SF1-202ENST00000334944 ASB2Q96Q27 587 aa13.55□□□□□ -0.24
SF1-202ENST00000334944 DEPDC7Q96QD5 511 aa13.55□□□□□ -0.24
SF1-202ENST00000334944 CLPBQ9H078 707 aa13.55□□□□□ -0.24
SF1-202ENST00000334944 RNF208Q9H0X6 261 aa13.55□□□□□ -0.24
SF1-202ENST00000334944 ZFYVE1Q9HBF4 777 aa13.55□□□□□ -0.24
SF1-202ENST00000334944 MOV10Q9HCE1 1003 aaKnown RBP13.55□□□□□ -0.24
SF1-202ENST00000334944 CD320Q9NPF0 282 aa13.55□□□□□ -0.24
SF1-202ENST00000334944 COMMD8Q9NX08 183 aa13.55□□□□□ -0.24
SF1-202ENST00000334944 CFAP97Q9P2B7 532 aa13.55□□□□□ -0.24
SF1-202ENST00000334944 SPEF1Q9Y4P9 236 aa13.55□□□□□ -0.24
SF1-202ENST00000334944 SLC22A3O75751 556 aa13.55□□□□□ -0.24
SF1-202ENST00000334944 ZFP36L2P47974 494 aaKnown RBP13.55□□□□□ -0.24
SF1-202ENST00000334944 MTPNP58546 118 aa13.55□□□□□ -0.24
SF1-202ENST00000334944 ADARB1P78563 741 aaKnown RBP13.55□□□□□ -0.24
SF1-202ENST00000334944 HMGCS1Q01581 520 aa13.55□□□□□ -0.24
SF1-202ENST00000334944 SBSNQ6UWP8 590 aa13.55□□□□□ -0.24
SF1-202ENST00000334944 DET1Q7L5Y6 550 aa13.55□□□□□ -0.24
SF1-202ENST00000334944 GOLGA7Q7Z5G4 137 aa13.55□□□□□ -0.24
SF1-202ENST00000334944 STK32CQ86UX6 486 aa13.55□□□□□ -0.24
SF1-202ENST00000334944 PACRGLQ8N7B6 248 aa13.55□□□□□ -0.24
SF1-202ENST00000334944 OR6Q1Q8NGQ2 317 aa13.55□□□□□ -0.24
SF1-202ENST00000334944 MED30Q96HR3 178 aa13.55□□□□□ -0.24
SF1-202ENST00000334944 MAP6Q96JE9 813 aa13.55□□□□□ -0.24
SF1-202ENST00000334944 RNF145Q96MT1 663 aa13.55□□□□□ -0.24
SF1-202ENST00000334944 ZFP14Q9HCL3 533 aa13.55□□□□□ -0.24
SF1-202ENST00000334944 SLC52A3Q9NQ40 469 aa13.55□□□□□ -0.24
SF1-202ENST00000334944 LATS2Q9NRM7 1088 aa13.55□□□□□ -0.24
SF1-202ENST00000334944 ELOVL2Q9NXB9 296 aa13.55□□□□□ -0.24
SF1-202ENST00000334944 OR51B4Q9Y5P0 310 aa13.55□□□□□ -0.24
SF1-202ENST00000334944 BACE2Q9Y5Z0 518 aa13.55□□□□□ -0.24
SF1-202ENST00000334944 ERVH48-1M5A8F1 160 aa13.55□□□□□ -0.24
SF1-202ENST00000334944 GAPDHSO14556 408 aaPredicted RBP13.55□□□□□ -0.24
SF1-202ENST00000334944 ALX3O95076 343 aa13.55□□□□□ -0.24
SF1-202ENST00000334944 PGLSO95336 258 aa13.55□□□□□ -0.24
SF1-202ENST00000334944 UROSP10746 265 aa13.55□□□□□ -0.24
SF1-202ENST00000334944 NAT2P11245 290 aa13.55□□□□□ -0.24
SF1-202ENST00000334944 PTGER3P43115 390 aa13.55□□□□□ -0.24
SF1-202ENST00000334944 PSMD8P48556 350 aa13.55□□□□□ -0.24
SF1-202ENST00000334944 GSK3BP49841 420 aa13.55□□□□□ -0.24
SF1-202ENST00000334944 POLR2JP52435 117 aaKnown RBP13.55□□□□□ -0.24
SF1-202ENST00000334944 LIPEQ05469 1076 aa13.55□□□□□ -0.24
SF1-202ENST00000334944 PTGR1Q14914 329 aa13.55□□□□□ -0.24
SF1-202ENST00000334944 CHRNA6Q15825 494 aa13.55□□□□□ -0.24
SF1-202ENST00000334944 CRY1Q16526 586 aa13.55□□□□□ -0.24
SF1-202ENST00000334944 RFTN2Q52LD8 501 aaPredicted RBP13.55□□□□□ -0.24
SF1-202ENST00000334944 CYP20A1Q6UW02 462 aa13.55□□□□□ -0.24
SF1-202ENST00000334944 SPRED1Q7Z699 444 aa13.55□□□□□ -0.24
SF1-202ENST00000334944 CLHC1Q8NHS4 586 aa13.55□□□□□ -0.24
SF1-202ENST00000334944 SKA2Q8WVK7 121 aaPredicted RBP13.55□□□□□ -0.24
SF1-202ENST00000334944 ROPN1LQ96C74 230 aa13.55□□□□□ -0.24
SF1-202ENST00000334944 IPPKQ9H8X2 491 aa13.55□□□□□ -0.24
SF1-202ENST00000334944 SMURF2Q9HAU4 748 aa13.55□□□□□ -0.24
SF1-202ENST00000334944 AIG1Q9NVV5 245 aa13.55□□□□□ -0.24
SF1-202ENST00000334944 PAQR5Q9NXK6 330 aaPredicted RBP13.55□□□□□ -0.24
SF1-202ENST00000334944 MBD1Q9UIS9 605 aaPredicted RBP13.55□□□□□ -0.24
SF1-202ENST00000334944 RIMKLBQ9ULI2 386 aa13.55□□□□□ -0.24
SF1-202ENST00000334944 POLR3HQ9Y535 204 aaPredicted RBP13.55□□□□□ -0.24
SF1-202ENST00000334944 ANGPTL3Q9Y5C1 460 aa13.55□□□□□ -0.24
SF1-202ENST00000334944 INSL5Q9Y5Q6 135 aa13.55□□□□□ -0.24
SF1-202ENST00000334944 LINC00854A0A1B0GVQ3 168 aa13.54□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 28.3 ms