RNA–Protein interactions for RNA: ENST00000329231.8

ATPAF1-201, Transcript of ATP synthase mitochondrial F1 complex assembly factor 1, humanhuman

TSL 2 BASIC

Gene ATPAF1, Length 1,241 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATPAF1-201ENST00000329231 CBSLP0DN79 551 aa26.59■■□□□ 1.85
ATPAF1-201ENST00000329231 PTPN4P29074 926 aa26.59■■□□□ 1.85
ATPAF1-201ENST00000329231 CBSP35520 551 aa26.59■■□□□ 1.85
ATPAF1-201ENST00000329231 ERV3-1Q14264 604 aa26.59■■□□□ 1.85
ATPAF1-201ENST00000329231 CYP2A13Q16696 494 aa26.59■■□□□ 1.85
ATPAF1-201ENST00000329231 HP1BP3Q5SSJ5 553 aaPredicted RBP26.59■■□□□ 1.85
ATPAF1-201ENST00000329231 BBOF1Q8ND07 529 aa26.59■■□□□ 1.85
ATPAF1-201ENST00000329231 OR9A1PQ8NGU1 263 aa26.59■■□□□ 1.85
ATPAF1-201ENST00000329231 DENND1AQ8TEH3 1009 aa26.59■■□□□ 1.85
ATPAF1-201ENST00000329231 CFAP36Q96G28 342 aa26.59■■□□□ 1.85
ATPAF1-201ENST00000329231 PWWP2AQ96N64 755 aa26.59■■□□□ 1.85
ATPAF1-201ENST00000329231 CHST8Q9H2A9 424 aa26.59■■□□□ 1.85
ATPAF1-201ENST00000329231 ACTL8Q9H568 366 aa26.59■■□□□ 1.85
ATPAF1-201ENST00000329231 PPANQ9NQ55 473 aaKnown RBP26.59■■□□□ 1.85
ATPAF1-201ENST00000329231 PCMTD2Q9NV79 361 aa26.59■■□□□ 1.85
ATPAF1-201ENST00000329231 CHMP2BQ9UQN3 213 aa26.59■■□□□ 1.85
ATPAF1-201ENST00000329231 ATRXP46100 2492 aa26.58■■□□□ 1.85
ATPAF1-201ENST00000329231 KRT87PA6NCN2 255 aa26.58■■□□□ 1.85
ATPAF1-201ENST00000329231 PRICKLE3O43900 615 aaPredicted RBP26.58■■□□□ 1.85
ATPAF1-201ENST00000329231 MPC1LP0DKB6 136 aa26.58■■□□□ 1.85
ATPAF1-201ENST00000329231 CUL1Q13616 776 aa26.58■■□□□ 1.85
ATPAF1-201ENST00000329231 DEFB109BQ30KR1 87 aa26.58■■□□□ 1.85
ATPAF1-201ENST00000329231 ATP1A1-AS1Q5TC04 95 aa26.58■■□□□ 1.85
ATPAF1-201ENST00000329231 UGT3A1Q6NUS8 523 aa26.58■■□□□ 1.85
ATPAF1-201ENST00000329231 SYTL1Q8IYJ3 562 aa26.58■■□□□ 1.85
ATPAF1-201ENST00000329231 CD200R1Q8TD46 325 aa26.58■■□□□ 1.85
ATPAF1-201ENST00000329231 DPH2Q9BQC3 489 aaPredicted RBP26.58■■□□□ 1.85
ATPAF1-201ENST00000329231 ADNPQ9H2P0 1102 aa26.58■■□□□ 1.85
ATPAF1-201ENST00000329231 IRAK4Q9NWZ3 460 aa26.58■■□□□ 1.85
ATPAF1-201ENST00000329231 GEMIN8Q9NWZ8 242 aaKnown RBP26.58■■□□□ 1.85
ATPAF1-201ENST00000329231 FARSAQ9Y285 508 aaKnown RBP26.58■■□□□ 1.85
ATPAF1-201ENST00000329231 KLHL20Q9Y2M5 609 aa26.58■■□□□ 1.85
ATPAF1-201ENST00000329231 TEX264Q9Y6I9 313 aa26.58■■□□□ 1.85
ATPAF1-201ENST00000329231 SPTBP11277 2137 aa26.57■■□□□ 1.84
ATPAF1-201ENST00000329231 FAM187AA6NFU0 413 aa26.57■■□□□ 1.84
ATPAF1-201ENST00000329231 MYO1CO00159 1063 aa26.57■■□□□ 1.84
ATPAF1-201ENST00000329231 EIF3FO00303 357 aaPredicted RBP26.57■■□□□ 1.84
ATPAF1-201ENST00000329231 HCRTR1O43613 425 aa26.57■■□□□ 1.84
ATPAF1-201ENST00000329231 TUBB4AP04350 444 aa26.57■■□□□ 1.84
ATPAF1-201ENST00000329231 HSD17B2P37059 387 aa26.57■■□□□ 1.84
ATPAF1-201ENST00000329231 RPL21P46778 160 aaKnown RBP26.57■■□□□ 1.84
ATPAF1-201ENST00000329231 CARSP49589 748 aaKnown RBP26.57■■□□□ 1.84
ATPAF1-201ENST00000329231 EEF1AKMT2Q5JPI9 291 aaKnown RBP26.57■■□□□ 1.84
ATPAF1-201ENST00000329231 TLDC1Q6P9B6 456 aa26.57■■□□□ 1.84
ATPAF1-201ENST00000329231 FIGLAQ6QHK4 219 aa26.57■■□□□ 1.84
ATPAF1-201ENST00000329231 MAATS1Q7Z4T9 603 aa26.57■■□□□ 1.84
ATPAF1-201ENST00000329231 GALNT7Q86SF2 657 aa26.57■■□□□ 1.84
ATPAF1-201ENST00000329231 APOBEC4Q8WW27 367 aaKnown RBP26.57■■□□□ 1.84
ATPAF1-201ENST00000329231 ZUFSPQ96AP4 578 aa26.57■■□□□ 1.84
ATPAF1-201ENST00000329231 SPRTNQ9H040 489 aaPredicted RBP26.57■■□□□ 1.84
ATPAF1-201ENST00000329231 EURLQ9NYK6 297 aa26.57■■□□□ 1.84
ATPAF1-201ENST00000329231 TRMT6Q9UJA5 497 aaKnown RBP26.57■■□□□ 1.84
ATPAF1-201ENST00000329231 SNX24Q9Y343 169 aa26.57■■□□□ 1.84
ATPAF1-201ENST00000329231 H3BMH7 237 aa26.56■■□□□ 1.84
ATPAF1-201ENST00000329231 ZSCAN9O15535 394 aaPredicted RBP26.56■■□□□ 1.84
ATPAF1-201ENST00000329231 RAB40ALP0C0E4 278 aa26.56■■□□□ 1.84
ATPAF1-201ENST00000329231 ERGP11308 486 aa26.56■■□□□ 1.84
ATPAF1-201ENST00000329231 AGXTP21549 392 aa26.56■■□□□ 1.84
ATPAF1-201ENST00000329231 SKIV2L2P42285 1042 aaKnown RBP26.56■■□□□ 1.84
ATPAF1-201ENST00000329231 POLE2P56282 527 aa26.56■■□□□ 1.84
ATPAF1-201ENST00000329231 COL9A2Q14055 689 aaPredicted RBP26.56■■□□□ 1.84
ATPAF1-201ENST00000329231 ARHGAP19Q14CB8 494 aa26.56■■□□□ 1.84
ATPAF1-201ENST00000329231 ZC3H12BQ5HYM0 836 aaKnown RBP26.56■■□□□ 1.84
ATPAF1-201ENST00000329231 STEAP4Q687X5 459 aa26.56■■□□□ 1.84
ATPAF1-201ENST00000329231 SYVN1Q86TM6 617 aa26.56■■□□□ 1.84
ATPAF1-201ENST00000329231 MCATQ8IVS2 390 aaKnown RBP26.56■■□□□ 1.84
ATPAF1-201ENST00000329231 FBXO15Q8NCQ5 510 aaPredicted RBP26.56■■□□□ 1.84
ATPAF1-201ENST00000329231 ASB11Q8WXH4 323 aa26.56■■□□□ 1.84
ATPAF1-201ENST00000329231 RUFY1Q96T51 708 aa26.56■■□□□ 1.84
ATPAF1-201ENST00000329231 PLAC1Q9HBJ0 212 aa26.56■■□□□ 1.84
ATPAF1-201ENST00000329231 TAS2R13Q9NYV9 303 aa26.56■■□□□ 1.84
ATPAF1-201ENST00000329231 SRPK3Q9UPE1 567 aa26.56■■□□□ 1.84
ATPAF1-201ENST00000329231 POLHQ9Y253 713 aa26.56■■□□□ 1.84
ATPAF1-201ENST00000329231 CDC14CA4D256 554 aa26.55■■□□□ 1.84
ATPAF1-201ENST00000329231 ZNF839A8K0R7 811 aa26.55■■□□□ 1.84
ATPAF1-201ENST00000329231 TARM1B6A8C7 271 aa26.55■■□□□ 1.84
ATPAF1-201ENST00000329231 TP73O15350 636 aa26.55■■□□□ 1.84
ATPAF1-201ENST00000329231 AHSGP02765 367 aa26.55■■□□□ 1.84
ATPAF1-201ENST00000329231 GABRB3P28472 473 aa26.55■■□□□ 1.84
ATPAF1-201ENST00000329231 PDIA2Q13087 525 aaKnown RBP26.55■■□□□ 1.84
ATPAF1-201ENST00000329231 TEDDM1Q5T9Z0 273 aa26.55■■□□□ 1.84
ATPAF1-201ENST00000329231 FCRL6Q6DN72 434 aa26.55■■□□□ 1.84
ATPAF1-201ENST00000329231 LCN10Q6JVE6 187 aa26.55■■□□□ 1.84
ATPAF1-201ENST00000329231 LRRC8EQ6NSJ5 796 aa26.55■■□□□ 1.84
ATPAF1-201ENST00000329231 RHBDD2Q6NTF9 364 aa26.55■■□□□ 1.84
ATPAF1-201ENST00000329231 CPNE9Q8IYJ1 553 aa26.55■■□□□ 1.84
ATPAF1-201ENST00000329231 OR2L3Q8NG85 312 aa26.55■■□□□ 1.84
ATPAF1-201ENST00000329231 SMPDL3AQ92484 453 aa26.55■■□□□ 1.84
ATPAF1-201ENST00000329231 NDNQ99608 321 aa26.55■■□□□ 1.84
ATPAF1-201ENST00000329231 WDR83Q9BRX9 315 aaKnown RBP26.55■■□□□ 1.84
ATPAF1-201ENST00000329231 ERP44Q9BS26 406 aa26.55■■□□□ 1.84
ATPAF1-201ENST00000329231 NLNQ9BYT8 704 aa26.55■■□□□ 1.84
ATPAF1-201ENST00000329231 TUBD1Q9UJT1 453 aa26.55■■□□□ 1.84
ATPAF1-201ENST00000329231 CDC23Q9UJX2 597 aa26.55■■□□□ 1.84
ATPAF1-201ENST00000329231 KIF2AO00139 706 aaPredicted RBP26.54■■□□□ 1.84
ATPAF1-201ENST00000329231 ZBTB14O43829 449 aa26.54■■□□□ 1.84
ATPAF1-201ENST00000329231 PSMB5P28074 263 aa26.54■■□□□ 1.84
ATPAF1-201ENST00000329231 GRIA3P42263 894 aa26.54■■□□□ 1.84
ATPAF1-201ENST00000329231 CKAP4Q07065 602 aaKnown RBP26.54■■□□□ 1.84
ATPAF1-201ENST00000329231 C2orf54Q08AI8 447 aa26.54■■□□□ 1.84
Retrieved 100 of 20,778 RNA–protein pairs in 22.3 ms