RNA–Protein interactions for RNA: ENST00000316052.5

EXOSC4-201, Transcript of exosome component 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene EXOSC4, Length 887 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EXOSC4-201ENST00000316052 C1orf54Q8WWF1 131 aa16.75■□□□□ 0.27
EXOSC4-201ENST00000316052 BARD1Q99728 777 aaKnown RBP16.75■□□□□ 0.27
EXOSC4-201ENST00000316052 FBXL4Q9UKA2 621 aa16.75■□□□□ 0.27
EXOSC4-201ENST00000316052 CSAG2Q9Y5P2 127 aa16.75■□□□□ 0.27
EXOSC4-201ENST00000316052 CAPN6Q9Y6Q1 641 aa16.75■□□□□ 0.27
EXOSC4-201ENST00000316052 A0A1B0GX78 115 aa16.74■□□□□ 0.27
EXOSC4-201ENST00000316052 F8W8V4 182 aa16.74■□□□□ 0.27
EXOSC4-201ENST00000316052 MMP11P24347 488 aa16.74■□□□□ 0.27
EXOSC4-201ENST00000316052 COL8A1P27658 744 aa16.74■□□□□ 0.27
EXOSC4-201ENST00000316052 SF1Q15637 639 aaKnown RBP16.74■□□□□ 0.27
EXOSC4-201ENST00000316052 NKG7Q16617 165 aa16.74■□□□□ 0.27
EXOSC4-201ENST00000316052 UNC5DQ6UXZ4 953 aa16.74■□□□□ 0.27
EXOSC4-201ENST00000316052 Q6ZS92 163 aa16.74■□□□□ 0.27
EXOSC4-201ENST00000316052 DCUN1D3Q8IWE4 304 aa16.74■□□□□ 0.27
EXOSC4-201ENST00000316052 ZADH2Q8N4Q0 377 aa16.74■□□□□ 0.27
EXOSC4-201ENST00000316052 DTWD1Q8N5C7 304 aa16.74■□□□□ 0.27
EXOSC4-201ENST00000316052 DLG3Q92796 817 aa16.74■□□□□ 0.27
EXOSC4-201ENST00000316052 ILKAPQ9H0C8 392 aaPredicted RBP16.74■□□□□ 0.27
EXOSC4-201ENST00000316052 SLC6A20Q9NP91 592 aa16.74■□□□□ 0.27
EXOSC4-201ENST00000316052 CHRAC1Q9NRG0 131 aa16.74■□□□□ 0.27
EXOSC4-201ENST00000316052 RAB6BQ9NRW1 208 aa16.74■□□□□ 0.27
EXOSC4-201ENST00000316052 CAMSAP3Q9P1Y5 1249 aaPredicted RBP16.74■□□□□ 0.27
EXOSC4-201ENST00000316052 ZNF148Q9UQR1 794 aa16.74■□□□□ 0.27
EXOSC4-201ENST00000316052 COPG1Q9Y678 874 aaKnown RBP16.74■□□□□ 0.27
EXOSC4-201ENST00000316052 KRT87PA6NCN2 255 aa16.73■□□□□ 0.27
EXOSC4-201ENST00000316052 E7EVH7 732 aa16.73■□□□□ 0.27
EXOSC4-201ENST00000316052 SOCS6O14544 535 aa16.73■□□□□ 0.27
EXOSC4-201ENST00000316052 RASGRF2O14827 1237 aa16.73■□□□□ 0.27
EXOSC4-201ENST00000316052 IPO13O94829 963 aaKnown RBP16.73■□□□□ 0.27
EXOSC4-201ENST00000316052 CLDN1O95832 211 aa16.73■□□□□ 0.27
EXOSC4-201ENST00000316052 S1PR4O95977 384 aa16.73■□□□□ 0.27
EXOSC4-201ENST00000316052 LDLRP01130 860 aa16.73■□□□□ 0.27
EXOSC4-201ENST00000316052 APOA4P06727 396 aa16.73■□□□□ 0.27
EXOSC4-201ENST00000316052 ZSCAN5DPP0CG00 497 aa16.73■□□□□ 0.27
EXOSC4-201ENST00000316052 ITGA3P26006 1051 aa16.73■□□□□ 0.27
EXOSC4-201ENST00000316052 GLRBP48167 497 aa16.73■□□□□ 0.27
EXOSC4-201ENST00000316052 ARSFP54793 590 aa16.73■□□□□ 0.27
EXOSC4-201ENST00000316052 PRAMEP78395 509 aa16.73■□□□□ 0.27
EXOSC4-201ENST00000316052 AIMP2Q13155 320 aaKnown RBP16.73■□□□□ 0.27
EXOSC4-201ENST00000316052 SNX1Q13596 522 aa16.73■□□□□ 0.27
EXOSC4-201ENST00000316052 HIF1AQ16665 826 aa16.73■□□□□ 0.27
EXOSC4-201ENST00000316052 CCSMST1Q4G0I0 132 aa16.73■□□□□ 0.27
EXOSC4-201ENST00000316052 KIRREL2Q6UWL6 708 aa16.73■□□□□ 0.27
EXOSC4-201ENST00000316052 SHISA6Q6ZSJ9 500 aa16.73■□□□□ 0.27
EXOSC4-201ENST00000316052 NLRP9Q7RTR0 991 aa16.73■□□□□ 0.27
EXOSC4-201ENST00000316052 SLC13A5Q86YT5 568 aaPredicted RBP16.73■□□□□ 0.27
EXOSC4-201ENST00000316052 FKBP10Q96AY3 582 aa16.73■□□□□ 0.27
EXOSC4-201ENST00000316052 NACC2Q96BF6 587 aa16.73■□□□□ 0.27
EXOSC4-201ENST00000316052 SLC22A18Q96BI1 424 aa16.73■□□□□ 0.27
EXOSC4-201ENST00000316052 ZNF285Q96NJ3 590 aa16.73■□□□□ 0.27
EXOSC4-201ENST00000316052 SPSB2Q99619 263 aa16.73■□□□□ 0.27
EXOSC4-201ENST00000316052 SLC26A1Q9H2B4 701 aa16.73■□□□□ 0.27
EXOSC4-201ENST00000316052 WDR54Q9H977 334 aa16.73■□□□□ 0.27
EXOSC4-201ENST00000316052 ENAMQ9NRM1 1142 aa16.73■□□□□ 0.27
EXOSC4-201ENST00000316052 CUTCQ9NTM9 273 aa16.73■□□□□ 0.27
EXOSC4-201ENST00000316052 CDC23Q9UJX2 597 aa16.73■□□□□ 0.27
EXOSC4-201ENST00000316052 PCDHGA10Q9Y5H3 936 aa16.73■□□□□ 0.27
EXOSC4-201ENST00000316052 HS3ST3B1Q9Y662 390 aa16.73■□□□□ 0.27
EXOSC4-201ENST00000316052 HEATR5BQ9P2D3 2071 aa16.73■□□□□ 0.27
EXOSC4-201ENST00000316052 ANKUB1A6NFN9 424 aa16.72■□□□□ 0.27
EXOSC4-201ENST00000316052 PRMT5O14744 637 aaPredicted RBP16.72■□□□□ 0.27
EXOSC4-201ENST00000316052 DSCR3O14972 297 aa16.72■□□□□ 0.27
EXOSC4-201ENST00000316052 CD3EAPO15446 510 aaKnown RBP16.72■□□□□ 0.27
EXOSC4-201ENST00000316052 KLHL41O60662 606 aa16.72■□□□□ 0.27
EXOSC4-201ENST00000316052 CTSVO60911 334 aa16.72■□□□□ 0.27
EXOSC4-201ENST00000316052 MED26O95402 600 aa16.72■□□□□ 0.27
EXOSC4-201ENST00000316052 ALBP02768 609 aa16.72■□□□□ 0.27
EXOSC4-201ENST00000316052 RPN2P04844 631 aa16.72■□□□□ 0.27
EXOSC4-201ENST00000316052 APRTP07741 180 aa16.72■□□□□ 0.27
EXOSC4-201ENST00000316052 PPARGP37231 505 aaPredicted RBP16.72■□□□□ 0.27
EXOSC4-201ENST00000316052 OR1D4P47884 311 aa16.72■□□□□ 0.27
EXOSC4-201ENST00000316052 CRADDP78560 199 aa16.72■□□□□ 0.27
EXOSC4-201ENST00000316052 PRAMEF13Q5VWM6 474 aa16.72■□□□□ 0.27
EXOSC4-201ENST00000316052 METTL27Q8N6F8 245 aaPredicted RBP16.72■□□□□ 0.27
EXOSC4-201ENST00000316052 PEX13Q92968 403 aa16.72■□□□□ 0.27
EXOSC4-201ENST00000316052 SELENOSQ9BQE4 189 aa16.72■□□□□ 0.27
EXOSC4-201ENST00000316052 MESP1Q9BRJ9 268 aa16.72■□□□□ 0.27
EXOSC4-201ENST00000316052 TSSK1BQ9BXA7 367 aa16.72■□□□□ 0.27
EXOSC4-201ENST00000316052 FRMD8P1Q9BZ68 369 aaPredicted RBP16.72■□□□□ 0.27
EXOSC4-201ENST00000316052 P2RY12Q9H244 342 aa16.72■□□□□ 0.27
EXOSC4-201ENST00000316052 SOX17Q9H6I2 414 aaPredicted RBP16.72■□□□□ 0.27
EXOSC4-201ENST00000316052 CATSPERZQ9NTU4 200 aa16.72■□□□□ 0.27
EXOSC4-201ENST00000316052 CTSFQ9UBX1 484 aa16.72■□□□□ 0.27
EXOSC4-201ENST00000316052 SLC39A10Q9ULF5 831 aa16.72■□□□□ 0.27
EXOSC4-201ENST00000316052 NFS1Q9Y697 457 aa16.72■□□□□ 0.27
EXOSC4-201ENST00000316052 FITM1A5D6W6 292 aa16.71■□□□□ 0.27
EXOSC4-201ENST00000316052 NRP2O60462 931 aa16.71■□□□□ 0.27
EXOSC4-201ENST00000316052 PIM1P11309 404 aaPredicted RBP16.71■□□□□ 0.27
EXOSC4-201ENST00000316052 PSMB5P28074 263 aa16.71■□□□□ 0.27
EXOSC4-201ENST00000316052 RPL22P35268 128 aaKnown RBP16.71■□□□□ 0.27
EXOSC4-201ENST00000316052 GRM7Q14831 915 aa16.71■□□□□ 0.27
EXOSC4-201ENST00000316052 ZC3H12BQ5HYM0 836 aaKnown RBP16.71■□□□□ 0.27
EXOSC4-201ENST00000316052 AARS2Q5JTZ9 985 aaKnown RBP16.71■□□□□ 0.27
EXOSC4-201ENST00000316052 ZNF787Q6DD87 383 aa16.71■□□□□ 0.27
EXOSC4-201ENST00000316052 PTRHD1Q6GMV3 140 aaKnown RBP16.71■□□□□ 0.27
EXOSC4-201ENST00000316052 MAMDC2Q7Z304 686 aaPredicted RBP16.71■□□□□ 0.27
EXOSC4-201ENST00000316052 PARP9Q8IXQ6 854 aa16.71■□□□□ 0.27
EXOSC4-201ENST00000316052 PPHLN1Q8NEY8 458 aaKnown RBP16.71■□□□□ 0.27
EXOSC4-201ENST00000316052 DENND1AQ8TEH3 1009 aa16.71■□□□□ 0.27
EXOSC4-201ENST00000316052 TM9SF4Q92544 642 aa16.71■□□□□ 0.27
Retrieved 100 of 20,778 RNA–protein pairs in 45.9 ms