RNA–Protein interactions for RNA: ENST00000315249.11

RFFL-201, Transcript of ring finger and FYVE like domain containing E3 ubiquitin protein ligase, humanhuman

APPRIS P1 TSL 2 BASIC

Gene RFFL, Length 7,293 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFFL-201ENST00000315249 TGDSO95455 350 aa13.18□□□□□ -0.3
RFFL-201ENST00000315249 GDF5P43026 501 aa13.18□□□□□ -0.3
RFFL-201ENST00000315249 OGDHQ02218 1023 aa13.18□□□□□ -0.3
RFFL-201ENST00000315249 RALGPS1Q5JS13 557 aa13.18□□□□□ -0.3
RFFL-201ENST00000315249 HIPK1Q86Z02 1210 aa13.18□□□□□ -0.3
RFFL-201ENST00000315249 GRHL3Q8TE85 626 aa13.18□□□□□ -0.3
RFFL-201ENST00000315249 PLEKHA1Q9HB21 404 aa13.18□□□□□ -0.3
RFFL-201ENST00000315249 CNTN6Q9UQ52 1028 aa13.18□□□□□ -0.3
RFFL-201ENST00000315249 COL2A1P02458 1487 aaPredicted RBP13.18□□□□□ -0.3
RFFL-201ENST00000315249 BBIP1A8MTZ0 92 aa13.18□□□□□ -0.3
RFFL-201ENST00000315249 CHRNGP07510 517 aa13.18□□□□□ -0.3
RFFL-201ENST00000315249 GLDCP23378 1020 aa13.18□□□□□ -0.3
RFFL-201ENST00000315249 CCR10P46092 362 aa13.18□□□□□ -0.3
RFFL-201ENST00000315249 TRAF3Q13114 568 aa13.18□□□□□ -0.3
RFFL-201ENST00000315249 ENPP2Q13822 863 aa13.18□□□□□ -0.3
RFFL-201ENST00000315249 TRIM25Q14258 630 aaKnown RBP13.18□□□□□ -0.3
RFFL-201ENST00000315249 MED22Q15528 200 aa13.18□□□□□ -0.3
RFFL-201ENST00000315249 CLNKQ7Z7G1 428 aa13.18□□□□□ -0.3
RFFL-201ENST00000315249 DCUN1D3Q8IWE4 304 aa13.18□□□□□ -0.3
RFFL-201ENST00000315249 OR10A6Q8NH74 314 aa13.18□□□□□ -0.3
RFFL-201ENST00000315249 OR5AK3PQ8NH89 298 aa13.18□□□□□ -0.3
RFFL-201ENST00000315249 LENG8Q96PV6 779 aaPredicted RBP13.18□□□□□ -0.3
RFFL-201ENST00000315249 PDP2Q9P2J9 529 aa13.18□□□□□ -0.3
RFFL-201ENST00000315249 SNX7Q9UNH6 387 aa13.18□□□□□ -0.3
RFFL-201ENST00000315249 SRPRAP08240 638 aaKnown RBP13.18□□□□□ -0.3
RFFL-201ENST00000315249 PRPS2P11908 318 aa13.18□□□□□ -0.3
RFFL-201ENST00000315249 MYCLP1P12525 358 aaPredicted RBP13.18□□□□□ -0.3
RFFL-201ENST00000315249 DRD1P21728 446 aa13.18□□□□□ -0.3
RFFL-201ENST00000315249 CCNIQ14094 377 aa13.18□□□□□ -0.3
RFFL-201ENST00000315249 PAFAH1B3Q15102 231 aaKnown RBP13.18□□□□□ -0.3
RFFL-201ENST00000315249 TFB2MQ9H5Q4 396 aaKnown RBP13.18□□□□□ -0.3
RFFL-201ENST00000315249 MAGEL2Q9UJ55 1249 aa13.18□□□□□ -0.3
RFFL-201ENST00000315249 ZNF180Q9UJW8 692 aa13.18□□□□□ -0.3
RFFL-201ENST00000315249 ZNF860A6NHJ4 632 aa13.18□□□□□ -0.3
RFFL-201ENST00000315249 ENO4A6NNW6 628 aa13.18□□□□□ -0.3
RFFL-201ENST00000315249 CSNK2A2P19784 350 aaPredicted RBP13.18□□□□□ -0.3
RFFL-201ENST00000315249 CTSKP43235 329 aa13.18□□□□□ -0.3
RFFL-201ENST00000315249 SEMA3AQ14563 771 aa13.18□□□□□ -0.3
RFFL-201ENST00000315249 MED31Q9Y3C7 131 aa13.18□□□□□ -0.3
RFFL-201ENST00000315249 K7ERQ8 282 aa13.18□□□□□ -0.3
RFFL-201ENST00000315249 TULP3O75386 442 aa13.18□□□□□ -0.3
RFFL-201ENST00000315249 IFNW1P05000 195 aa13.18□□□□□ -0.3
RFFL-201ENST00000315249 ALPPP05187 535 aa13.18□□□□□ -0.3
RFFL-201ENST00000315249 ZNF761Q86XN6 746 aaPredicted RBP13.18□□□□□ -0.3
RFFL-201ENST00000315249 HM13Q8TCT9 377 aa13.18□□□□□ -0.3
RFFL-201ENST00000315249 EFHD2Q96C19 240 aaPredicted RBP13.18□□□□□ -0.3
RFFL-201ENST00000315249 PRR11Q96HE9 360 aaPredicted RBP13.18□□□□□ -0.3
RFFL-201ENST00000315249 C1orf74Q96LT6 269 aa13.18□□□□□ -0.3
RFFL-201ENST00000315249 DUSP26Q9BV47 211 aa13.18□□□□□ -0.3
RFFL-201ENST00000315249 USP29Q9HBJ7 922 aa13.18□□□□□ -0.3
RFFL-201ENST00000315249 PDE7BQ9NP56 450 aa13.18□□□□□ -0.3
RFFL-201ENST00000315249 C4AP0C0L4 1744 aa13.18□□□□□ -0.3
RFFL-201ENST00000315249 RIIAD1A6NNX1 92 aa13.18□□□□□ -0.3
RFFL-201ENST00000315249 MT-ND1P03886 318 aa13.18□□□□□ -0.3
RFFL-201ENST00000315249 MYL9P24844 172 aa13.18□□□□□ -0.3
RFFL-201ENST00000315249 CXCR1P25024 350 aa13.18□□□□□ -0.3
RFFL-201ENST00000315249 PTX3P26022 381 aaPredicted RBP13.18□□□□□ -0.3
RFFL-201ENST00000315249 RSBN1Q5VWQ0 802 aaPredicted RBP13.18□□□□□ -0.3
RFFL-201ENST00000315249 RNF43Q68DV7 783 aa13.18□□□□□ -0.3
RFFL-201ENST00000315249 ERICH5Q6P6B1 374 aa13.18□□□□□ -0.3
RFFL-201ENST00000315249 FRRS1Q6ZNA5 592 aa13.18□□□□□ -0.3
RFFL-201ENST00000315249 FAM92BQ6ZTR7 304 aa13.18□□□□□ -0.3
RFFL-201ENST00000315249 TAS1R1Q7RTX1 841 aa13.18□□□□□ -0.3
RFFL-201ENST00000315249 EPB41L1Q9H4G0 881 aa13.18□□□□□ -0.3
RFFL-201ENST00000315249 IFT80Q9P2H3 777 aaPredicted RBP13.18□□□□□ -0.3
RFFL-201ENST00000315249 STYXL1Q9Y6J8 313 aa13.18□□□□□ -0.3
RFFL-201ENST00000315249 ELOA3DA6NLF2 546 aaPredicted RBP13.17□□□□□ -0.3
RFFL-201ENST00000315249 RBMXL2O75526 392 aaKnown RBP13.17□□□□□ -0.3
RFFL-201ENST00000315249 CDH1P12830 882 aa13.17□□□□□ -0.3
RFFL-201ENST00000315249 C5AR1P21730 350 aa13.17□□□□□ -0.3
RFFL-201ENST00000315249 OMPP47874 163 aa13.17□□□□□ -0.3
RFFL-201ENST00000315249 CXCL12P48061 93 aa13.17□□□□□ -0.3
RFFL-201ENST00000315249 SMU1Q2TAY7 513 aa13.17□□□□□ -0.3
RFFL-201ENST00000315249 ELOA3BQ3SY89 546 aa13.17□□□□□ -0.3
RFFL-201ENST00000315249 NXPE1Q8N323 547 aa13.17□□□□□ -0.3
RFFL-201ENST00000315249 ELOA3Q8NG57 546 aa13.17□□□□□ -0.3
RFFL-201ENST00000315249 FGF13Q92913 245 aa13.17□□□□□ -0.3
RFFL-201ENST00000315249 PEBP4Q96S96 227 aa13.17□□□□□ -0.3
RFFL-201ENST00000315249 DCUN1D5Q9BTE7 237 aa13.17□□□□□ -0.3
RFFL-201ENST00000315249 NUAK2Q9H093 628 aa13.17□□□□□ -0.3
RFFL-201ENST00000315249 XYLT2Q9H1B5 865 aa13.17□□□□□ -0.3
RFFL-201ENST00000315249 PDP1Q9P0J1 537 aaPredicted RBP13.17□□□□□ -0.3
RFFL-201ENST00000315249 THEGLP0DJG4 465 aa13.17□□□□□ -0.3
RFFL-201ENST00000315249 CBSLP0DN79 551 aa13.17□□□□□ -0.3
RFFL-201ENST00000315249 ZNF823P16415 610 aa13.17□□□□□ -0.3
RFFL-201ENST00000315249 CBSP35520 551 aa13.17□□□□□ -0.3
RFFL-201ENST00000315249 GALNT2Q10471 571 aa13.17□□□□□ -0.3
RFFL-201ENST00000315249 DDX59Q5T1V6 619 aaKnown RBP eCLIP13.17□□□□□ -0.3
RFFL-201ENST00000315249 OR4C6Q8NH72 309 aa13.17□□□□□ -0.3
RFFL-201ENST00000315249 DDX60Q8IY21 1712 aaKnown RBP13.17□□□□□ -0.3
RFFL-201ENST00000315249 GLOD5A6NK44 160 aa13.17□□□□□ -0.3
RFFL-201ENST00000315249 TSC22D2O75157 780 aa13.17□□□□□ -0.3
RFFL-201ENST00000315249 CAMK1Q14012 370 aa13.17□□□□□ -0.3
RFFL-201ENST00000315249 FAR1Q8WVX9 515 aa13.17□□□□□ -0.3
RFFL-201ENST00000315249 EFCAB11Q9BUY7 163 aa13.17□□□□□ -0.3
RFFL-201ENST00000315249 ZDHHC7Q9NXF8 308 aa13.17□□□□□ -0.3
RFFL-201ENST00000315249 MYH14Q7Z406 1995 aaKnown RBP13.17□□□□□ -0.3
RFFL-201ENST00000315249 CLEC3AO75596 197 aa13.17□□□□□ -0.3
RFFL-201ENST00000315249 ALOX12P18054 663 aa13.17□□□□□ -0.3
RFFL-201ENST00000315249 CDKN1CP49918 316 aaPredicted RBP13.17□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 21.6 ms