RNA–Protein interactions for RNA: ENST00000308127.8

SSH3-201, Transcript of slingshot protein phosphatase 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SSH3, Length 2,871 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSH3-201ENST00000308127 A0A096LPI6 279 aa16.17■□□□□ 0.18
SSH3-201ENST00000308127 IFRD1O00458 451 aaPredicted RBP16.17■□□□□ 0.18
SSH3-201ENST00000308127 COCHO43405 550 aa16.17■□□□□ 0.18
SSH3-201ENST00000308127 SCELO95171 688 aa16.17■□□□□ 0.18
SSH3-201ENST00000308127 SEC24AO95486 1093 aa16.17■□□□□ 0.18
SSH3-201ENST00000308127 NUDT7P0C024 238 aa16.17■□□□□ 0.18
SSH3-201ENST00000308127 ITPKAP23677 461 aa16.17■□□□□ 0.18
SSH3-201ENST00000308127 C21orf33P30042 268 aaPredicted RBP16.17■□□□□ 0.18
SSH3-201ENST00000308127 MRPL19P49406 292 aaKnown RBP16.17■□□□□ 0.18
SSH3-201ENST00000308127 RPS14P62263 151 aaKnown RBP16.17■□□□□ 0.18
SSH3-201ENST00000308127 DSC1Q08554 894 aa16.17■□□□□ 0.18
SSH3-201ENST00000308127 CYP27C1Q4G0S4 372 aa16.17■□□□□ 0.18
SSH3-201ENST00000308127 USP39Q53GS9 565 aaKnown RBP16.17■□□□□ 0.18
SSH3-201ENST00000308127 ALG1LQ6GMV1 187 aa16.17■□□□□ 0.18
SSH3-201ENST00000308127 PDE12Q6L8Q7 609 aaKnown RBP16.17■□□□□ 0.18
SSH3-201ENST00000308127 TSPAN33Q86UF1 283 aa16.17■□□□□ 0.18
SSH3-201ENST00000308127 CD244Q9BZW8 370 aa16.17■□□□□ 0.18
SSH3-201ENST00000308127 RNF38Q9H0F5 515 aa16.17■□□□□ 0.18
SSH3-201ENST00000308127 TNKS2Q9H2K2 1166 aa16.17■□□□□ 0.18
SSH3-201ENST00000308127 OLA1Q9NTK5 396 aaKnown RBP16.17■□□□□ 0.18
SSH3-201ENST00000308127 KIF17Q9P2E2 1029 aa16.17■□□□□ 0.18
SSH3-201ENST00000308127 TSC22D4Q9Y3Q8 395 aa16.17■□□□□ 0.18
SSH3-201ENST00000308127 C2orf78A6NCI8 922 aa16.16■□□□□ 0.18
SSH3-201ENST00000308127 SLC38A8A6NNN8 435 aa16.16■□□□□ 0.18
SSH3-201ENST00000308127 COQ9O75208 318 aa16.16■□□□□ 0.18
SSH3-201ENST00000308127 GSTT2P0CG29 244 aa16.16■□□□□ 0.18
SSH3-201ENST00000308127 GSTT2BP0CG30 244 aa16.16■□□□□ 0.18
SSH3-201ENST00000308127 KRT20P35900 424 aa16.16■□□□□ 0.18
SSH3-201ENST00000308127 SLC11A2P49281 568 aa16.16■□□□□ 0.18
SSH3-201ENST00000308127 BTG3Q14201 252 aaPredicted RBP16.16■□□□□ 0.18
SSH3-201ENST00000308127 ZXDCQ2QGD7 858 aaPredicted RBP16.16■□□□□ 0.18
SSH3-201ENST00000308127 TMEM53Q6P2H8 277 aa16.16■□□□□ 0.18
SSH3-201ENST00000308127 TTC29Q8NA56 475 aaPredicted RBP16.16■□□□□ 0.18
SSH3-201ENST00000308127 PROX1Q92786 737 aa16.16■□□□□ 0.18
SSH3-201ENST00000308127 CPPED1Q9BRF8 314 aaPredicted RBP16.16■□□□□ 0.18
SSH3-201ENST00000308127 C6orf62Q9GZU0 229 aaPredicted RBP16.16■□□□□ 0.18
SSH3-201ENST00000308127 ERVK-11Q9UQG0 969 aa16.16■□□□□ 0.18
SSH3-201ENST00000308127 VPS9D1Q9Y2B5 631 aa16.16■□□□□ 0.18
SSH3-201ENST00000308127 PLXNA4Q9HCM2 1894 aa16.16■□□□□ 0.18
SSH3-201ENST00000308127 CDH23Q9H251 3354 aa16.16■□□□□ 0.18
SSH3-201ENST00000308127 GAPDHSO14556 408 aaPredicted RBP16.16■□□□□ 0.18
SSH3-201ENST00000308127 GABARAPO95166 117 aa16.16■□□□□ 0.18
SSH3-201ENST00000308127 DBTP11182 482 aaKnown RBP16.16■□□□□ 0.18
SSH3-201ENST00000308127 EPB42P16452 691 aa16.16■□□□□ 0.18
SSH3-201ENST00000308127 CD36P16671 472 aa16.16■□□□□ 0.18
SSH3-201ENST00000308127 HOXD12P35452 270 aa16.16■□□□□ 0.18
SSH3-201ENST00000308127 CDH4P55283 916 aa16.16■□□□□ 0.18
SSH3-201ENST00000308127 CREMQ03060 361 aa16.16■□□□□ 0.18
SSH3-201ENST00000308127 CACNG1Q06432 222 aa16.16■□□□□ 0.18
SSH3-201ENST00000308127 ZNF621Q6ZSS3 439 aa16.16■□□□□ 0.18
SSH3-201ENST00000308127 CLECL1Q8IZS7 167 aa16.16■□□□□ 0.18
SSH3-201ENST00000308127 MAL2Q969L2 176 aa16.16■□□□□ 0.18
SSH3-201ENST00000308127 BBS2Q9BXC9 721 aa16.16■□□□□ 0.18
SSH3-201ENST00000308127 ATG10Q9H0Y0 220 aa16.16■□□□□ 0.18
SSH3-201ENST00000308127 PALMDQ9NP74 551 aa16.16■□□□□ 0.18
SSH3-201ENST00000308127 ATAD3AQ9NVI7 634 aa16.16■□□□□ 0.18
SSH3-201ENST00000308127 USE1Q9NZ43 259 aa16.16■□□□□ 0.18
SSH3-201ENST00000308127 CRLS1Q9UJA2 301 aa16.16■□□□□ 0.18
SSH3-201ENST00000308127 DNMT3LQ9UJW3 386 aa16.16■□□□□ 0.18
SSH3-201ENST00000308127 RIMKLBQ9ULI2 386 aa16.16■□□□□ 0.18
SSH3-201ENST00000308127 SAMHD1Q9Y3Z3 626 aaKnown RBP16.16■□□□□ 0.18
SSH3-201ENST00000308127 CHD5Q8TDI0 1954 aa16.16■□□□□ 0.18
SSH3-201ENST00000308127 DNAH14Q0VDD8 3507 aa16.16■□□□□ 0.18
SSH3-201ENST00000308127 RFXANKO14593 260 aa16.16■□□□□ 0.18
SSH3-201ENST00000308127 TBX1O43435 398 aa16.16■□□□□ 0.18
SSH3-201ENST00000308127 RECQL5O94762 991 aaPredicted RBP16.16■□□□□ 0.18
SSH3-201ENST00000308127 NTRK1P04629 796 aa16.16■□□□□ 0.18
SSH3-201ENST00000308127 IL6P05231 212 aa16.16■□□□□ 0.18
SSH3-201ENST00000308127 GTF2E2P29084 291 aaKnown RBP16.16■□□□□ 0.18
SSH3-201ENST00000308127 GABARAPL2P60520 117 aa16.16■□□□□ 0.18
SSH3-201ENST00000308127 HSPA14Q0VDF9 509 aa16.16■□□□□ 0.18
SSH3-201ENST00000308127 CHRNA6Q15825 494 aa16.16■□□□□ 0.18
SSH3-201ENST00000308127 ZNF362Q5T0B9 420 aaPredicted RBP16.16■□□□□ 0.18
SSH3-201ENST00000308127 CXorf57Q6NSI4 855 aaKnown RBP16.16■□□□□ 0.18
SSH3-201ENST00000308127 PLD3Q8IV08 490 aa16.16■□□□□ 0.18
SSH3-201ENST00000308127 RAVER1Q8IY67 606 aaKnown RBP16.16■□□□□ 0.18
SSH3-201ENST00000308127 KCNC2Q96PR1 638 aa16.16■□□□□ 0.18
SSH3-201ENST00000308127 TRIT1Q9H3H1 467 aaKnown RBP16.16■□□□□ 0.18
SSH3-201ENST00000308127 MAGEE1Q9HCI5 957 aa16.16■□□□□ 0.18
SSH3-201ENST00000308127 IL26Q9NPH9 171 aa16.16■□□□□ 0.18
SSH3-201ENST00000308127 ARL15Q9NXU5 204 aa16.16■□□□□ 0.18
SSH3-201ENST00000308127 LOC100506127A0A0U1RQW1 187 aa16.15■□□□□ 0.18
SSH3-201ENST00000308127 CNOT3O75175 753 aaKnown RBP16.15■□□□□ 0.18
SSH3-201ENST00000308127 MTX2O75431 263 aa16.15■□□□□ 0.18
SSH3-201ENST00000308127 MYO1DO94832 1006 aa16.15■□□□□ 0.18
SSH3-201ENST00000308127 PGLSO95336 258 aa16.15■□□□□ 0.18
SSH3-201ENST00000308127 CCND3P30281 292 aaPredicted RBP16.15■□□□□ 0.18
SSH3-201ENST00000308127 HUNKP57058 714 aa16.15■□□□□ 0.18
SSH3-201ENST00000308127 SLC35A2P78381 396 aa16.15■□□□□ 0.18
SSH3-201ENST00000308127 RGMBQ6NW40 437 aa16.15■□□□□ 0.18
SSH3-201ENST00000308127 OR52J3Q8NH60 311 aa16.15■□□□□ 0.18
SSH3-201ENST00000308127 SLC35B4Q969S0 331 aa16.15■□□□□ 0.18
SSH3-201ENST00000308127 DACH2Q96NX9 599 aa16.15■□□□□ 0.18
SSH3-201ENST00000308127 BTBD2Q9BX70 525 aa16.15■□□□□ 0.18
SSH3-201ENST00000308127 ZNF232Q9UNY5 417 aa16.15■□□□□ 0.18
SSH3-201ENST00000308127 DYTNA2CJ06 578 aa16.15■□□□□ 0.18
SSH3-201ENST00000308127 HTR3EA5X5Y0 456 aa16.15■□□□□ 0.18
SSH3-201ENST00000308127 UGT2B4P06133 528 aa16.15■□□□□ 0.18
SSH3-201ENST00000308127 ZNF7P17097 686 aaPredicted RBP16.15■□□□□ 0.18
SSH3-201ENST00000308127 CLCN4P51793 760 aa16.15■□□□□ 0.18
Retrieved 100 of 20,778 RNA–protein pairs in 20.2 ms