RNA–Protein interactions for RNA: ENST00000303758.7

HMGN1P35-201, Transcript of high mobility group nucleosome binding domain 1 pseudogene 35, humanhuman

BASIC

Gene HMGN1P35, Length 594 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN1P35-201ENST00000303758 DENND1AQ8TEH3 1009 aa10.46□□□□□ -0.73
HMGN1P35-201ENST00000303758 BIRC8Q96P09 236 aa10.46□□□□□ -0.73
HMGN1P35-201ENST00000303758 TRIM56Q9BRZ2 755 aaKnown RBP10.46□□□□□ -0.73
HMGN1P35-201ENST00000303758 DHRS4Q9BTZ2 278 aa10.46□□□□□ -0.73
HMGN1P35-201ENST00000303758 SPRTNQ9H040 489 aaPredicted RBP10.46□□□□□ -0.73
HMGN1P35-201ENST00000303758 ING2Q9H160 280 aa10.46□□□□□ -0.73
HMGN1P35-201ENST00000303758 EPN3Q9H201 632 aa10.46□□□□□ -0.73
HMGN1P35-201ENST00000303758 FAM114A2Q9NRY5 505 aa10.46□□□□□ -0.73
HMGN1P35-201ENST00000303758 C20orf96Q9NUD7 363 aaPredicted RBP10.46□□□□□ -0.73
HMGN1P35-201ENST00000303758 SPATA7Q9P0W8 599 aa10.46□□□□□ -0.73
HMGN1P35-201ENST00000303758 IFT80Q9P2H3 777 aaPredicted RBP10.46□□□□□ -0.73
HMGN1P35-201ENST00000303758 DHCR7Q9UBM7 475 aaKnown RBP10.46□□□□□ -0.73
HMGN1P35-201ENST00000303758 ASIC3Q9UHC3 531 aa10.46□□□□□ -0.73
HMGN1P35-201ENST00000303758 SNX12Q9UMY4 172 aa10.46□□□□□ -0.73
HMGN1P35-201ENST00000303758 KLHL20Q9Y2M5 609 aa10.46□□□□□ -0.73
HMGN1P35-201ENST00000303758 FAM169AQ9Y6X4 670 aa10.46□□□□□ -0.73
HMGN1P35-201ENST00000303758 TNRC6AQ8NDV7 1962 aaKnown RBP10.46□□□□□ -0.74
HMGN1P35-201ENST00000303758 SPTBP11277 2137 aa10.46□□□□□ -0.74
HMGN1P35-201ENST00000303758 FER1L5A0AVI2 2057 aa10.45□□□□□ -0.74
HMGN1P35-201ENST00000303758 NUP210LQ5VU65 1888 aa10.45□□□□□ -0.74
HMGN1P35-201ENST00000303758 CES2O00748 559 aa10.45□□□□□ -0.74
HMGN1P35-201ENST00000303758 HCRTR1O43613 425 aa10.45□□□□□ -0.74
HMGN1P35-201ENST00000303758 USP1O94782 785 aa10.45□□□□□ -0.74
HMGN1P35-201ENST00000303758 FKBP9O95302 570 aa10.45□□□□□ -0.74
HMGN1P35-201ENST00000303758 CATP04040 527 aaKnown RBP10.45□□□□□ -0.74
HMGN1P35-201ENST00000303758 CD63P08962 238 aa10.45□□□□□ -0.74
HMGN1P35-201ENST00000303758 CBSLP0DN79 551 aa10.45□□□□□ -0.74
HMGN1P35-201ENST00000303758 ALAS2P22557 587 aa10.45□□□□□ -0.74
HMGN1P35-201ENST00000303758 ATP5DP30049 168 aa10.45□□□□□ -0.74
HMGN1P35-201ENST00000303758 OTX2P32243 289 aa10.45□□□□□ -0.74
HMGN1P35-201ENST00000303758 CBSP35520 551 aa10.45□□□□□ -0.74
HMGN1P35-201ENST00000303758 CASRP41180 1078 aa10.45□□□□□ -0.74
HMGN1P35-201ENST00000303758 FOLR3P41439 243 aa10.45□□□□□ -0.74
HMGN1P35-201ENST00000303758 GABRA4P48169 554 aa10.45□□□□□ -0.74
HMGN1P35-201ENST00000303758 CCL11P51671 97 aa10.45□□□□□ -0.74
HMGN1P35-201ENST00000303758 PGDP52209 483 aa10.45□□□□□ -0.74
HMGN1P35-201ENST00000303758 RRADP55042 308 aa10.45□□□□□ -0.74
HMGN1P35-201ENST00000303758 ADARP55265 1226 aaKnown RBP10.45□□□□□ -0.74
HMGN1P35-201ENST00000303758 DCDP81605 110 aaKnown RBP10.45□□□□□ -0.74
HMGN1P35-201ENST00000303758 TSTA3Q13630 321 aaPredicted RBP10.45□□□□□ -0.74
HMGN1P35-201ENST00000303758 GRB7Q14451 532 aa10.45□□□□□ -0.74
HMGN1P35-201ENST00000303758 NAA25Q14CX7 972 aa10.45□□□□□ -0.74
HMGN1P35-201ENST00000303758 LONRF1Q17RB8 773 aa10.45□□□□□ -0.74
HMGN1P35-201ENST00000303758 CCSMST1Q4G0I0 132 aa10.45□□□□□ -0.74
HMGN1P35-201ENST00000303758 FAM69BQ5VUD6 431 aa10.45□□□□□ -0.74
HMGN1P35-201ENST00000303758 TCTN3Q6NUS6 607 aa10.45□□□□□ -0.74
HMGN1P35-201ENST00000303758 FIGLAQ6QHK4 219 aa10.45□□□□□ -0.74
HMGN1P35-201ENST00000303758 CENPUQ71F23 418 aa10.45□□□□□ -0.74
HMGN1P35-201ENST00000303758 MCATQ8IVS2 390 aaKnown RBP10.45□□□□□ -0.74
HMGN1P35-201ENST00000303758 LMNTD2Q8IXW0 634 aa10.45□□□□□ -0.74
HMGN1P35-201ENST00000303758 DNAJC22Q8N4W6 341 aa10.45□□□□□ -0.74
HMGN1P35-201ENST00000303758 GABPB2Q8TAK5 448 aaPredicted RBP10.45□□□□□ -0.74
HMGN1P35-201ENST00000303758 CALML6Q8TD86 181 aa10.45□□□□□ -0.74
HMGN1P35-201ENST00000303758 MIPEPQ99797 713 aa10.45□□□□□ -0.74
HMGN1P35-201ENST00000303758 SELENOSQ9BQE4 189 aa10.45□□□□□ -0.74
HMGN1P35-201ENST00000303758 MENTQ9BUN1 341 aa10.45□□□□□ -0.74
HMGN1P35-201ENST00000303758 SLC25A23Q9BV35 468 aa10.45□□□□□ -0.74
HMGN1P35-201ENST00000303758 TRIM55Q9BYV6 548 aa10.45□□□□□ -0.74
HMGN1P35-201ENST00000303758 FBXO6Q9NRD1 293 aaPredicted RBP10.45□□□□□ -0.74
HMGN1P35-201ENST00000303758 EURLQ9NYK6 297 aa10.45□□□□□ -0.74
HMGN1P35-201ENST00000303758 PTRH2Q9Y3E5 179 aaKnown RBP10.45□□□□□ -0.74
HMGN1P35-201ENST00000303758 UBR5O95071 2799 aaPredicted RBP10.45□□□□□ -0.74
HMGN1P35-201ENST00000303758 KRT87PA6NCN2 255 aa10.44□□□□□ -0.74
HMGN1P35-201ENST00000303758 ZNF839A8K0R7 811 aa10.44□□□□□ -0.74
HMGN1P35-201ENST00000303758 ZNF185O15231 689 aa10.44□□□□□ -0.74
HMGN1P35-201ENST00000303758 CAPN1P07384 714 aa10.44□□□□□ -0.74
HMGN1P35-201ENST00000303758 CTSBP07858 339 aa10.44□□□□□ -0.74
HMGN1P35-201ENST00000303758 ERVK-10P10266 1014 aa10.44□□□□□ -0.74
HMGN1P35-201ENST00000303758 TCP1P17987 556 aaKnown RBP10.44□□□□□ -0.74
HMGN1P35-201ENST00000303758 PSMB5P28074 263 aa10.44□□□□□ -0.74
HMGN1P35-201ENST00000303758 CMPK1P30085 196 aa10.44□□□□□ -0.74
HMGN1P35-201ENST00000303758 RPA3P35244 121 aaPredicted RBP10.44□□□□□ -0.74
HMGN1P35-201ENST00000303758 GRIA3P42263 894 aa10.44□□□□□ -0.74
HMGN1P35-201ENST00000303758 SLC1A2P43004 574 aa10.44□□□□□ -0.74
HMGN1P35-201ENST00000303758 ARSFP54793 590 aa10.44□□□□□ -0.74
HMGN1P35-201ENST00000303758 CTBP1Q13363 440 aa10.44□□□□□ -0.74
HMGN1P35-201ENST00000303758 CUL1Q13616 776 aa10.44□□□□□ -0.74
HMGN1P35-201ENST00000303758 ATP1A4Q13733 1029 aa10.44□□□□□ -0.74
HMGN1P35-201ENST00000303758 KLHL38Q2WGJ6 581 aa10.44□□□□□ -0.74
HMGN1P35-201ENST00000303758 ACSBG2Q5FVE4 666 aa10.44□□□□□ -0.74
HMGN1P35-201ENST00000303758 TCTE1Q5JU00 501 aa10.44□□□□□ -0.74
HMGN1P35-201ENST00000303758 COLEC12Q5KU26 742 aa10.44□□□□□ -0.74
HMGN1P35-201ENST00000303758 ZNF385CQ66K41 422 aaPredicted RBP10.44□□□□□ -0.74
HMGN1P35-201ENST00000303758 TTLL10Q6ZVT0 673 aa10.44□□□□□ -0.74
HMGN1P35-201ENST00000303758 MED25Q71SY5 747 aa10.44□□□□□ -0.74
HMGN1P35-201ENST00000303758 PCGF5Q86SE9 256 aa10.44□□□□□ -0.74
HMGN1P35-201ENST00000303758 DENND6AQ8IWF6 608 aa10.44□□□□□ -0.74
HMGN1P35-201ENST00000303758 NAT8LQ8N9F0 302 aa10.44□□□□□ -0.74
HMGN1P35-201ENST00000303758 SERBP1Q8NC51 408 aaKnown RBP eCLIP10.44□□□□□ -0.74
HMGN1P35-201ENST00000303758 GBP5Q96PP8 586 aa10.44□□□□□ -0.74
HMGN1P35-201ENST00000303758 FAM167BQ9BTA0 163 aa10.44□□□□□ -0.74
HMGN1P35-201ENST00000303758 DDX47Q9H0S4 455 aaKnown RBP10.44□□□□□ -0.74
HMGN1P35-201ENST00000303758 KCNF1Q9H3M0 494 aa10.44□□□□□ -0.74
HMGN1P35-201ENST00000303758 SPTA1P02549 2419 aa10.44□□□□□ -0.74
HMGN1P35-201ENST00000303758 CCDC88CQ9P219 2028 aa10.43□□□□□ -0.74
HMGN1P35-201ENST00000303758 ZCWPW2A0A1B0GU75 182 aa10.43□□□□□ -0.74
HMGN1P35-201ENST00000303758 A0A1B0GX78 115 aa10.43□□□□□ -0.74
HMGN1P35-201ENST00000303758 ARHGEF33A8MVX0 844 aa10.43□□□□□ -0.74
HMGN1P35-201ENST00000303758 TARM1B6A8C7 271 aa10.43□□□□□ -0.74
HMGN1P35-201ENST00000303758 H3BMH7 237 aa10.43□□□□□ -0.74
Retrieved 100 of 20,778 RNA–protein pairs in 28.1 ms