RNA–Protein interactions for RNA: ENST00000303450.4

HOXC9-201, Transcript of homeobox C9, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HOXC9, Length 1,516 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HOXC9-201ENST00000303450 CD180Q99467 661 aa23.67■■□□□ 1.38
HOXC9-201ENST00000303450 PDP2Q9P2J9 529 aa23.67■■□□□ 1.38
HOXC9-201ENST00000303450 POMT2Q9UKY4 750 aa23.67■■□□□ 1.38
HOXC9-201ENST00000303450 NCF1BA6NI72 391 aaPredicted RBP23.66■■□□□ 1.38
HOXC9-201ENST00000303450 A8MU76 341 aa23.66■■□□□ 1.38
HOXC9-201ENST00000303450 NCF1CA8MVU1 366 aaPredicted RBP23.66■■□□□ 1.38
HOXC9-201ENST00000303450 E7ENX8 843 aa23.66■■□□□ 1.38
HOXC9-201ENST00000303450 TMX2-CTNND1H3BSU7 103 aa23.66■■□□□ 1.38
HOXC9-201ENST00000303450 RGS16O15492 202 aaPredicted RBP23.66■■□□□ 1.38
HOXC9-201ENST00000303450 KERAO60938 352 aa23.66■■□□□ 1.38
HOXC9-201ENST00000303450 THRAP10827 490 aa23.66■■□□□ 1.38
HOXC9-201ENST00000303450 NCF1P14598 390 aaPredicted RBP23.66■■□□□ 1.38
HOXC9-201ENST00000303450 KPNA2P52292 529 aaKnown RBP23.66■■□□□ 1.38
HOXC9-201ENST00000303450 TAP2Q03519 686 aa23.66■■□□□ 1.38
HOXC9-201ENST00000303450 ZFP36L1Q07352 338 aaKnown RBP23.66■■□□□ 1.38
HOXC9-201ENST00000303450 ISXQ2M1V0 245 aa23.66■■□□□ 1.38
HOXC9-201ENST00000303450 LCA5Q86VQ0 697 aa23.66■■□□□ 1.38
HOXC9-201ENST00000303450 FBXL8Q96CD0 374 aa23.66■■□□□ 1.38
HOXC9-201ENST00000303450 RUFY1Q96T51 708 aa23.66■■□□□ 1.38
HOXC9-201ENST00000303450 CENPHQ9H3R5 247 aa23.66■■□□□ 1.38
HOXC9-201ENST00000303450 COL27A1Q8IZC6 1860 aaPredicted RBP23.66■■□□□ 1.38
HOXC9-201ENST00000303450 SYCE1LA8MT33 242 aa23.65■■□□□ 1.38
HOXC9-201ENST00000303450 KIF1CO43896 1103 aaKnown RBP23.65■■□□□ 1.38
HOXC9-201ENST00000303450 S100BP04271 92 aaPredicted RBP23.65■■□□□ 1.38
HOXC9-201ENST00000303450 RBP1P09455 135 aa23.65■■□□□ 1.38
HOXC9-201ENST00000303450 UGT2B7P16662 529 aa23.65■■□□□ 1.38
HOXC9-201ENST00000303450 PEBP1P30086 187 aaKnown RBP23.65■■□□□ 1.38
HOXC9-201ENST00000303450 KCNC1P48547 511 aa23.65■■□□□ 1.38
HOXC9-201ENST00000303450 FOXC1Q12948 553 aa23.65■■□□□ 1.38
HOXC9-201ENST00000303450 TRA2AQ13595 282 aaKnown RBP eCLIP23.65■■□□□ 1.38
HOXC9-201ENST00000303450 CACHD1Q5VU97 1274 aa23.65■■□□□ 1.38
HOXC9-201ENST00000303450 SPESP1Q6UW49 350 aa23.65■■□□□ 1.38
HOXC9-201ENST00000303450 SUSD1Q6UWL2 747 aa23.65■■□□□ 1.38
HOXC9-201ENST00000303450 TMPRSS7Q7RTY8 843 aa23.65■■□□□ 1.38
HOXC9-201ENST00000303450 CACTIN-AS1Q8N1I8 211 aa23.65■■□□□ 1.38
HOXC9-201ENST00000303450 ZBTB9Q96C00 473 aa23.65■■□□□ 1.38
HOXC9-201ENST00000303450 OR2A14Q96R47 310 aa23.65■■□□□ 1.38
HOXC9-201ENST00000303450 ATOH8Q96SQ7 321 aa23.65■■□□□ 1.38
HOXC9-201ENST00000303450 MAP3K3Q99759 626 aa23.65■■□□□ 1.38
HOXC9-201ENST00000303450 STRADBQ9C0K7 418 aa23.65■■□□□ 1.38
HOXC9-201ENST00000303450 TWSG1Q9GZX9 223 aa23.65■■□□□ 1.38
HOXC9-201ENST00000303450 ATG10Q9H0Y0 220 aa23.65■■□□□ 1.38
HOXC9-201ENST00000303450 CD274Q9NZQ7 290 aa23.65■■□□□ 1.38
HOXC9-201ENST00000303450 PCM1Q15154 2024 aa23.65■■□□□ 1.38
HOXC9-201ENST00000303450 PTPRBP23467 1997 aa23.65■■□□□ 1.38
HOXC9-201ENST00000303450 FAM149AA5PLN7 773 aa23.64■■□□□ 1.38
HOXC9-201ENST00000303450 TLCD2A6NGC4 264 aa23.64■■□□□ 1.38
HOXC9-201ENST00000303450 KRT4P19013 534 aa23.64■■□□□ 1.38
HOXC9-201ENST00000303450 CDH3P22223 829 aa23.64■■□□□ 1.38
HOXC9-201ENST00000303450 OAS2P29728 719 aaKnown RBP23.64■■□□□ 1.38
HOXC9-201ENST00000303450 CCKBRP32239 447 aa23.64■■□□□ 1.38
HOXC9-201ENST00000303450 RPA3P35244 121 aaPredicted RBP23.64■■□□□ 1.38
HOXC9-201ENST00000303450 HNMTP50135 292 aa23.64■■□□□ 1.38
HOXC9-201ENST00000303450 TRABD2AQ86V40 505 aa23.64■■□□□ 1.38
HOXC9-201ENST00000303450 RCBTB1Q8NDN9 531 aa23.64■■□□□ 1.38
HOXC9-201ENST00000303450 MED8Q96G25 268 aa23.64■■□□□ 1.38
HOXC9-201ENST00000303450 ABCF3Q9NUQ8 709 aa23.64■■□□□ 1.38
HOXC9-201ENST00000303450 DCDC2Q9UHG0 476 aa23.64■■□□□ 1.38
HOXC9-201ENST00000303450 SUPT3HB4E1H0 165 aa23.64■■□□□ 1.37
HOXC9-201ENST00000303450 TOX3O15405 576 aaPredicted RBP23.64■■□□□ 1.37
HOXC9-201ENST00000303450 SUPT3HO75486 399 aa23.64■■□□□ 1.37
HOXC9-201ENST00000303450 GSTA1P08263 222 aa23.64■■□□□ 1.37
HOXC9-201ENST00000303450 TARDBPQ13148 414 aaKnown RBP eCLIP23.64■■□□□ 1.37
HOXC9-201ENST00000303450 NAE1Q13564 534 aa23.64■■□□□ 1.37
HOXC9-201ENST00000303450 SF1Q15637 639 aaKnown RBP23.64■■□□□ 1.37
HOXC9-201ENST00000303450 TECRLQ5HYJ1 363 aa23.64■■□□□ 1.37
HOXC9-201ENST00000303450 CDKL4Q5MAI5 379 aa23.64■■□□□ 1.37
HOXC9-201ENST00000303450 THEMIS2Q5TEJ8 643 aa23.64■■□□□ 1.37
HOXC9-201ENST00000303450 SH2D5Q6ZV89 423 aa23.64■■□□□ 1.37
HOXC9-201ENST00000303450 HDXQ7Z353 690 aa23.64■■□□□ 1.37
HOXC9-201ENST00000303450 PRSS42Q7Z5A4 293 aa23.64■■□□□ 1.37
HOXC9-201ENST00000303450 SRRM1Q8IYB3 904 aaKnown RBP23.64■■□□□ 1.37
HOXC9-201ENST00000303450 LRRC56Q8IYG6 542 aaPredicted RBP23.64■■□□□ 1.37
HOXC9-201ENST00000303450 C4orf33Q8N1A6 199 aa23.64■■□□□ 1.37
HOXC9-201ENST00000303450 ALKBH8Q96BT7 664 aaKnown RBP23.64■■□□□ 1.37
HOXC9-201ENST00000303450 GRAMD1AQ96CP6 724 aa23.64■■□□□ 1.37
HOXC9-201ENST00000303450 PPM1MQ96MI6 270 aa23.64■■□□□ 1.37
HOXC9-201ENST00000303450 CCDC177Q9NQR7 707 aaPredicted RBP23.64■■□□□ 1.37
HOXC9-201ENST00000303450 C1GALT1Q9NS00 363 aa23.64■■□□□ 1.37
HOXC9-201ENST00000303450 NUDT4Q9NZJ9 180 aa23.64■■□□□ 1.37
HOXC9-201ENST00000303450 PCDHB11Q9Y5F2 797 aa23.64■■□□□ 1.37
HOXC9-201ENST00000303450 A0A1W2PPV9 198 aa23.63■■□□□ 1.37
HOXC9-201ENST00000303450 UBXN8O00124 270 aa23.63■■□□□ 1.37
HOXC9-201ENST00000303450 HYAL3O43820 417 aaPredicted RBP23.63■■□□□ 1.37
HOXC9-201ENST00000303450 PRICKLE3O43900 615 aaPredicted RBP23.63■■□□□ 1.37
HOXC9-201ENST00000303450 CCT5P48643 541 aa23.63■■□□□ 1.37
HOXC9-201ENST00000303450 TBPL1P62380 186 aa23.63■■□□□ 1.37
HOXC9-201ENST00000303450 SLC5A12Q1EHB4 618 aa23.63■■□□□ 1.37
HOXC9-201ENST00000303450 ARHGAP22Q7Z5H3 698 aa23.63■■□□□ 1.37
HOXC9-201ENST00000303450 CARFQ8N187 725 aa23.63■■□□□ 1.37
HOXC9-201ENST00000303450 TCAIMQ8N3R3 496 aa23.63■■□□□ 1.37
HOXC9-201ENST00000303450 FLVCR1-AS1Q8TAF5 88 aa23.63■■□□□ 1.37
HOXC9-201ENST00000303450 RHBDF1Q96CC6 855 aa23.63■■□□□ 1.37
HOXC9-201ENST00000303450 MRPL57Q9BQC6 102 aaKnown RBP23.63■■□□□ 1.37
HOXC9-201ENST00000303450 ACAT2Q9BWD1 397 aa23.63■■□□□ 1.37
HOXC9-201ENST00000303450 XPR1Q9UBH6 696 aa23.63■■□□□ 1.37
HOXC9-201ENST00000303450 COPEO14579 308 aa23.62■■□□□ 1.37
HOXC9-201ENST00000303450 ANKRD34CP0C6C1 535 aa23.62■■□□□ 1.37
HOXC9-201ENST00000303450 CCND1P24385 295 aa23.62■■□□□ 1.37
HOXC9-201ENST00000303450 PSMB5P28074 263 aa23.62■■□□□ 1.37
Retrieved 100 of 20,778 RNA–protein pairs in 46.1 ms