RNA–Protein interactions for RNA: ENST00000301019.8

CDT1-201, Transcript of chromatin licensing and DNA replication factor 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CDT1, Length 3,240 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDT1-201ENST00000301019 PDZK1Q5T2W1 519 aa14.08□□□□□ -0.16
CDT1-201ENST00000301019 SYVN1Q86TM6 617 aa14.08□□□□□ -0.16
CDT1-201ENST00000301019 RAET1EQ8TD07 263 aa14.08□□□□□ -0.16
CDT1-201ENST00000301019 PCDHB5Q9Y5E4 795 aa14.08□□□□□ -0.16
CDT1-201ENST00000301019 DOCK5Q9H7D0 1870 aa14.08□□□□□ -0.16
CDT1-201ENST00000301019 A0A1B0GVC2 190 aa14.08□□□□□ -0.16
CDT1-201ENST00000301019 A6NIN4 97 aa14.08□□□□□ -0.16
CDT1-201ENST00000301019 B4GALT4O60513 344 aa14.08□□□□□ -0.16
CDT1-201ENST00000301019 GJB3O75712 270 aa14.08□□□□□ -0.16
CDT1-201ENST00000301019 LRATO95237 230 aa14.08□□□□□ -0.16
CDT1-201ENST00000301019 UGT2B15P54855 530 aa14.08□□□□□ -0.16
CDT1-201ENST00000301019 EMX2Q04743 252 aa14.08□□□□□ -0.16
CDT1-201ENST00000301019 FAM122CQ6P4D5 195 aa14.08□□□□□ -0.16
CDT1-201ENST00000301019 RAB44Q7Z6P3 723 aaPredicted RBP14.08□□□□□ -0.16
CDT1-201ENST00000301019 VSIG10LQ86VR7 867 aa14.08□□□□□ -0.16
CDT1-201ENST00000301019 PTRH1Q86Y79 214 aaKnown RBP14.08□□□□□ -0.16
CDT1-201ENST00000301019 TESCQ96BS2 214 aa14.08□□□□□ -0.16
CDT1-201ENST00000301019 DIRAS2Q96HU8 199 aa14.08□□□□□ -0.16
CDT1-201ENST00000301019 RIPOR3Q96MK2 946 aa14.08□□□□□ -0.16
CDT1-201ENST00000301019 BEX1Q9HBH7 125 aa14.08□□□□□ -0.16
CDT1-201ENST00000301019 SIRT5Q9NXA8 310 aa14.08□□□□□ -0.16
CDT1-201ENST00000301019 POM121CA8CG34 1229 aa14.07□□□□□ -0.16
CDT1-201ENST00000301019 HACD1B0YJ81 288 aa14.07□□□□□ -0.16
CDT1-201ENST00000301019 B4DXG7 233 aa14.07□□□□□ -0.16
CDT1-201ENST00000301019 CDC7O00311 574 aa14.07□□□□□ -0.16
CDT1-201ENST00000301019 WBP4O75554 376 aaKnown RBP14.07□□□□□ -0.16
CDT1-201ENST00000301019 GGT1P19440 569 aa14.07□□□□□ -0.16
CDT1-201ENST00000301019 ITGALP20701 1170 aa14.07□□□□□ -0.16
CDT1-201ENST00000301019 KIR2DL3P43628 341 aa14.07□□□□□ -0.16
CDT1-201ENST00000301019 PPP3CCP48454 512 aa14.07□□□□□ -0.16
CDT1-201ENST00000301019 EEFSECP57772 596 aaKnown RBP14.07□□□□□ -0.16
CDT1-201ENST00000301019 KRR1Q13601 381 aaKnown RBP14.07□□□□□ -0.16
CDT1-201ENST00000301019 DOC2BQ14184 412 aa14.07□□□□□ -0.16
CDT1-201ENST00000301019 MAD2L1BPQ15013 274 aaPredicted RBP14.07□□□□□ -0.16
CDT1-201ENST00000301019 MPZL3Q6UWV2 235 aa14.07□□□□□ -0.16
CDT1-201ENST00000301019 COMMD7Q86VX2 200 aa14.07□□□□□ -0.16
CDT1-201ENST00000301019 SLC35F5Q8WV83 523 aa14.07□□□□□ -0.16
CDT1-201ENST00000301019 C18orf25Q96B23 403 aaPredicted RBP14.07□□□□□ -0.16
CDT1-201ENST00000301019 RADILQ96JH8 1075 aa14.07□□□□□ -0.16
CDT1-201ENST00000301019 ASB2Q96Q27 587 aa14.07□□□□□ -0.16
CDT1-201ENST00000301019 CYP2S1Q96SQ9 504 aa14.07□□□□□ -0.16
CDT1-201ENST00000301019 FAM83DQ9H4H8 585 aa14.07□□□□□ -0.16
CDT1-201ENST00000301019 DDIT4Q9NX09 232 aa14.07□□□□□ -0.16
CDT1-201ENST00000301019 ZNF222Q9UK12 451 aa14.07□□□□□ -0.16
CDT1-201ENST00000301019 IKZF3Q9UKT9 509 aa14.07□□□□□ -0.16
CDT1-201ENST00000301019 RIMKLBQ9ULI2 386 aa14.07□□□□□ -0.16
CDT1-201ENST00000301019 ALG5Q9Y673 324 aa14.07□□□□□ -0.16
CDT1-201ENST00000301019 TP53BP1Q12888 1972 aaPredicted RBP14.07□□□□□ -0.16
CDT1-201ENST00000301019 A0A087X1B8 175 aa14.07□□□□□ -0.16
CDT1-201ENST00000301019 SYN3O14994 580 aa14.07□□□□□ -0.16
CDT1-201ENST00000301019 AREL1O15033 823 aa14.07□□□□□ -0.16
CDT1-201ENST00000301019 KCNJ13O60928 360 aa14.07□□□□□ -0.16
CDT1-201ENST00000301019 TSPAN19P0C672 248 aa14.07□□□□□ -0.16
CDT1-201ENST00000301019 SLC2A4P14672 509 aa14.07□□□□□ -0.16
CDT1-201ENST00000301019 ITGA2P17301 1181 aa14.07□□□□□ -0.16
CDT1-201ENST00000301019 RPS19P39019 145 aaKnown RBP14.07□□□□□ -0.16
CDT1-201ENST00000301019 DNAJB13P59910 316 aa14.07□□□□□ -0.16
CDT1-201ENST00000301019 HMGCS1Q01581 520 aa14.07□□□□□ -0.16
CDT1-201ENST00000301019 TARDBPQ13148 414 aaKnown RBP eCLIP14.07□□□□□ -0.16
CDT1-201ENST00000301019 GALEQ14376 348 aa14.07□□□□□ -0.16
CDT1-201ENST00000301019 QPRTQ15274 297 aa14.07□□□□□ -0.16
CDT1-201ENST00000301019 PLET1Q6UQ28 207 aa14.07□□□□□ -0.16
CDT1-201ENST00000301019 RHBDF1Q96CC6 855 aa14.07□□□□□ -0.16
CDT1-201ENST00000301019 SLC52A3Q9NQ40 469 aa14.07□□□□□ -0.16
CDT1-201ENST00000301019 SMPD4Q9NXE4 827 aa14.07□□□□□ -0.16
CDT1-201ENST00000301019 RNF112Q9ULX5 631 aa14.07□□□□□ -0.16
CDT1-201ENST00000301019 TANC1Q9C0D5 1861 aa14.07□□□□□ -0.16
CDT1-201ENST00000301019 PER2O15055 1255 aa14.07□□□□□ -0.16
CDT1-201ENST00000301019 ANKRD28O15084 1053 aa14.07□□□□□ -0.16
CDT1-201ENST00000301019 MTRF1O75570 445 aaKnown RBP14.07□□□□□ -0.16
CDT1-201ENST00000301019 MOCS2O96007 188 aaPredicted RBP14.07□□□□□ -0.16
CDT1-201ENST00000301019 PLATP00750 562 aa14.07□□□□□ -0.16
CDT1-201ENST00000301019 RPL38P63173 70 aaKnown RBP14.07□□□□□ -0.16
CDT1-201ENST00000301019 GALNT1Q10472 559 aaPredicted RBP14.07□□□□□ -0.16
CDT1-201ENST00000301019 MRPL28Q13084 256 aaKnown RBP14.07□□□□□ -0.16
CDT1-201ENST00000301019 CLVS2Q5SYC1 327 aa14.07□□□□□ -0.16
CDT1-201ENST00000301019 DLEU7Q6UYE1 221 aa14.07□□□□□ -0.16
CDT1-201ENST00000301019 LSM14AQ8ND56 463 aaKnown RBP14.07□□□□□ -0.16
CDT1-201ENST00000301019 OR5K1Q8NHB7 308 aa14.07□□□□□ -0.16
CDT1-201ENST00000301019 ZFAND1Q8TCF1 268 aa14.07□□□□□ -0.16
CDT1-201ENST00000301019 C12orf42Q96LP6 360 aa14.07□□□□□ -0.16
CDT1-201ENST00000301019 APOL4Q9BPW4 351 aa14.07□□□□□ -0.16
CDT1-201ENST00000301019 C12orf10Q9HB07 376 aa14.07□□□□□ -0.16
CDT1-201ENST00000301019 GOLGA2P5Q9HBQ8 144 aa14.07□□□□□ -0.16
CDT1-201ENST00000301019 ATP6V1HQ9UI12 483 aa14.07□□□□□ -0.16
CDT1-201ENST00000301019 LAMA2P24043 3122 aaKnown RBP14.06□□□□□ -0.16
CDT1-201ENST00000301019 ELOVL7A1L3X0 281 aa14.06□□□□□ -0.16
CDT1-201ENST00000301019 TULP3O75386 442 aa14.06□□□□□ -0.16
CDT1-201ENST00000301019 PAMP19021 973 aa14.06□□□□□ -0.16
CDT1-201ENST00000301019 RPA4Q13156 261 aa14.06□□□□□ -0.16
CDT1-201ENST00000301019 TMEM132DQ14C87 1099 aa14.06□□□□□ -0.16
CDT1-201ENST00000301019 RFTN2Q52LD8 501 aaPredicted RBP14.06□□□□□ -0.16
CDT1-201ENST00000301019 RNASE12Q5GAN4 147 aaKnown RBP14.06□□□□□ -0.16
CDT1-201ENST00000301019 KCTD11Q693B1 232 aa14.06□□□□□ -0.16
CDT1-201ENST00000301019 TMCO6Q96DC7 493 aa14.06□□□□□ -0.16
CDT1-201ENST00000301019 MCCC1Q96RQ3 725 aaPredicted RBP14.06□□□□□ -0.16
CDT1-201ENST00000301019 CSTF2TQ9H0L4 616 aaKnown RBP eCLIP14.06□□□□□ -0.16
CDT1-201ENST00000301019 ADARB2Q9NS39 739 aaKnown RBP14.06□□□□□ -0.16
CDT1-201ENST00000301019 EIF2B4Q9UI10 523 aaKnown RBP14.06□□□□□ -0.16
CDT1-201ENST00000301019 TRMT6Q9UJA5 497 aaKnown RBP14.06□□□□□ -0.16
Retrieved 100 of 20,778 RNA–protein pairs in 28.2 ms