RNA–Protein interactions for RNA: ENST00000296051.6

HPS3-201, Transcript of HPS3, biogenesis of lysosomal organelles complex 2 subunit 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HPS3, Length 4,665 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HPS3-201ENST00000296051 MTMR11A4FU01 709 aa13.14□□□□□ -0.31
HPS3-201ENST00000296051 PLOD2O00469 737 aa13.14□□□□□ -0.31
HPS3-201ENST00000296051 NME4O00746 187 aa13.14□□□□□ -0.31
HPS3-201ENST00000296051 HLA-EP13747 358 aa13.14□□□□□ -0.31
HPS3-201ENST00000296051 HPCAL1P37235 193 aa13.14□□□□□ -0.31
HPS3-201ENST00000296051 MAPKAPK2P49137 400 aa13.14□□□□□ -0.31
HPS3-201ENST00000296051 ZNF789Q5FWF6 425 aa13.14□□□□□ -0.31
HPS3-201ENST00000296051 TMEM220Q6QAJ8 160 aa13.14□□□□□ -0.31
HPS3-201ENST00000296051 PACRGLQ8N7B6 248 aa13.14□□□□□ -0.31
HPS3-201ENST00000296051 DIRAS2Q96HU8 199 aa13.14□□□□□ -0.31
HPS3-201ENST00000296051 TMLHEQ9NVH6 421 aa13.14□□□□□ -0.31
HPS3-201ENST00000296051 PTBP2Q9UKA9 531 aaKnown RBP13.14□□□□□ -0.31
HPS3-201ENST00000296051 ARID1BQ8NFD5 2236 aaPredicted RBP13.14□□□□□ -0.31
HPS3-201ENST00000296051 TAF1P21675 1872 aa13.14□□□□□ -0.31
HPS3-201ENST00000296051 LOC100130705A0A1B0GUX0 176 aa13.14□□□□□ -0.31
HPS3-201ENST00000296051 A8MU76 341 aa13.14□□□□□ -0.31
HPS3-201ENST00000296051 CCRL2O00421 344 aa13.14□□□□□ -0.31
HPS3-201ENST00000296051 IRAK2O43187 625 aa13.14□□□□□ -0.31
HPS3-201ENST00000296051 ERVK-8P63133 956 aa13.14□□□□□ -0.31
HPS3-201ENST00000296051 NFATC3Q12968 1075 aa13.14□□□□□ -0.31
HPS3-201ENST00000296051 HNRNPDQ14103 355 aaKnown RBP13.14□□□□□ -0.31
HPS3-201ENST00000296051 NIPAL1Q6NVV3 410 aa13.14□□□□□ -0.31
HPS3-201ENST00000296051 LIN28BQ6ZN17 250 aaKnown RBP eCLIP13.14□□□□□ -0.31
HPS3-201ENST00000296051 NPY6RQ99463 290 aa13.14□□□□□ -0.31
HPS3-201ENST00000296051 PTPN18Q99952 460 aa13.14□□□□□ -0.31
HPS3-201ENST00000296051 CNPPD1Q9BV87 410 aa13.14□□□□□ -0.31
HPS3-201ENST00000296051 SERHL2Q9H4I8 314 aa13.14□□□□□ -0.31
HPS3-201ENST00000296051 SERHLQ9NQF3 203 aa13.14□□□□□ -0.31
HPS3-201ENST00000296051 C8orf4Q9NR00 106 aa13.14□□□□□ -0.31
HPS3-201ENST00000296051 SAMD4AQ9UPU9 718 aaKnown RBP13.14□□□□□ -0.31
HPS3-201ENST00000296051 ABCB7O75027 752 aa13.14□□□□□ -0.31
HPS3-201ENST00000296051 ATE1O95260 518 aa13.14□□□□□ -0.31
HPS3-201ENST00000296051 RHOP08100 348 aa13.14□□□□□ -0.31
HPS3-201ENST00000296051 PORP16435 677 aaPredicted RBP13.14□□□□□ -0.31
HPS3-201ENST00000296051 CDH12P55289 794 aa13.14□□□□□ -0.31
HPS3-201ENST00000296051 STX4Q12846 297 aa13.14□□□□□ -0.31
HPS3-201ENST00000296051 FBXL22Q6P050 247 aa13.14□□□□□ -0.31
HPS3-201ENST00000296051 PGM2L1Q6PCE3 622 aa13.14□□□□□ -0.31
HPS3-201ENST00000296051 TMPRSS11BQ86T26 416 aa13.14□□□□□ -0.31
HPS3-201ENST00000296051 RAB43Q86YS6 212 aa13.14□□□□□ -0.31
HPS3-201ENST00000296051 WFIKKN2Q8TEU8 576 aa13.14□□□□□ -0.31
HPS3-201ENST00000296051 PTCD2Q8WV60 388 aaKnown RBP13.14□□□□□ -0.31
HPS3-201ENST00000296051 PIH1D2Q8WWB5 315 aa13.14□□□□□ -0.31
HPS3-201ENST00000296051 METTL21AQ8WXB1 218 aa13.14□□□□□ -0.31
HPS3-201ENST00000296051 CLP1Q92989 425 aaKnown RBP13.14□□□□□ -0.31
HPS3-201ENST00000296051 ACDQ96AP0 544 aa13.14□□□□□ -0.31
HPS3-201ENST00000296051 KLF15Q9UIH9 416 aa13.14□□□□□ -0.31
HPS3-201ENST00000296051 PCDHGA7Q9Y5G6 932 aa13.14□□□□□ -0.31
HPS3-201ENST00000296051 SETD1AO15047 1707 aaKnown RBP13.14□□□□□ -0.31
HPS3-201ENST00000296051 GVINP1Q7Z2Y8 2422 aa13.13□□□□□ -0.31
HPS3-201ENST00000296051 FAM240BA0A1B0GVZ2 78 aa13.13□□□□□ -0.31
HPS3-201ENST00000296051 PPP6CO00743 305 aa13.13□□□□□ -0.31
HPS3-201ENST00000296051 OPN1SWP03999 348 aa13.13□□□□□ -0.31
HPS3-201ENST00000296051 TYRP14679 529 aa13.13□□□□□ -0.31
HPS3-201ENST00000296051 EN2P19622 333 aaPredicted RBP13.13□□□□□ -0.31
HPS3-201ENST00000296051 GLDCP23378 1020 aa13.13□□□□□ -0.31
HPS3-201ENST00000296051 RXRGP48443 463 aa13.13□□□□□ -0.31
HPS3-201ENST00000296051 ARRB1P49407 418 aaPredicted RBP13.13□□□□□ -0.31
HPS3-201ENST00000296051 OR4D2P58180 307 aa13.13□□□□□ -0.31
HPS3-201ENST00000296051 PHC1P78364 1004 aa13.13□□□□□ -0.31
HPS3-201ENST00000296051 COX10Q12887 443 aa13.13□□□□□ -0.31
HPS3-201ENST00000296051 GTF2H2Q13888 395 aa13.13□□□□□ -0.31
HPS3-201ENST00000296051 THOC7Q6I9Y2 204 aaKnown RBP13.13□□□□□ -0.31
HPS3-201ENST00000296051 GTF2H2CQ6P1K8 395 aa13.13□□□□□ -0.31
HPS3-201ENST00000296051 METTL25Q8N6Q8 603 aa13.13□□□□□ -0.31
HPS3-201ENST00000296051 MZB1Q8WU39 189 aa13.13□□□□□ -0.31
HPS3-201ENST00000296051 NELL1Q92832 810 aa13.13□□□□□ -0.31
HPS3-201ENST00000296051 HAPLN3Q96S86 360 aa13.13□□□□□ -0.31
HPS3-201ENST00000296051 OLFM1Q99784 485 aa13.13□□□□□ -0.31
HPS3-201ENST00000296051 ZDHHC4Q9NPG8 344 aa13.13□□□□□ -0.31
HPS3-201ENST00000296051 KRCC1Q9NPI7 259 aaPredicted RBP13.13□□□□□ -0.31
HPS3-201ENST00000296051 SNTG1Q9NSN8 517 aa13.13□□□□□ -0.31
HPS3-201ENST00000296051 SLC28A1O00337 649 aa13.13□□□□□ -0.31
HPS3-201ENST00000296051 CDH1P12830 882 aa13.13□□□□□ -0.31
HPS3-201ENST00000296051 ITPRIPL2Q3MIP1 535 aa13.13□□□□□ -0.31
HPS3-201ENST00000296051 SULT1C3Q6IMI6 304 aa13.13□□□□□ -0.31
HPS3-201ENST00000296051 CAPN13Q6MZZ7 669 aaPredicted RBP13.13□□□□□ -0.31
HPS3-201ENST00000296051 TRNP1Q6NT89 227 aa13.13□□□□□ -0.31
HPS3-201ENST00000296051 MAMDC4Q6UXC1 1216 aa13.13□□□□□ -0.31
HPS3-201ENST00000296051 AGMOQ6ZNB7 445 aa13.13□□□□□ -0.31
HPS3-201ENST00000296051 NPWQ8N729 165 aa13.13□□□□□ -0.31
HPS3-201ENST00000296051 VANGL1Q8TAA9 524 aaPredicted RBP13.13□□□□□ -0.31
HPS3-201ENST00000296051 ART5Q96L15 291 aa13.13□□□□□ -0.31
HPS3-201ENST00000296051 RIMS3Q9UJD0 308 aa13.13□□□□□ -0.31
HPS3-201ENST00000296051 ZNF222Q9UK12 451 aa13.13□□□□□ -0.31
HPS3-201ENST00000296051 COLEC10Q9Y6Z7 277 aa13.13□□□□□ -0.31
HPS3-201ENST00000296051 H3BMQ9 156 aa13.13□□□□□ -0.31
HPS3-201ENST00000296051 ITPKBP27987 946 aa13.13□□□□□ -0.31
HPS3-201ENST00000296051 PAFAH1B3Q15102 231 aaKnown RBP13.13□□□□□ -0.31
HPS3-201ENST00000296051 NEK10Q6ZWH5 1172 aa13.13□□□□□ -0.31
HPS3-201ENST00000296051 MAVSQ7Z434 540 aa13.13□□□□□ -0.31
HPS3-201ENST00000296051 CLDN19Q8N6F1 224 aa13.13□□□□□ -0.31
HPS3-201ENST00000296051 COG8Q96MW5 612 aa13.13□□□□□ -0.31
HPS3-201ENST00000296051 KCNC2Q96PR1 638 aa13.13□□□□□ -0.31
HPS3-201ENST00000296051 TMEM209Q96SK2 561 aa13.13□□□□□ -0.31
HPS3-201ENST00000296051 RNF38Q9H0F5 515 aa13.13□□□□□ -0.31
HPS3-201ENST00000296051 AASSQ9UDR5 926 aa13.13□□□□□ -0.31
HPS3-201ENST00000296051 PCDHB3Q9Y5E6 796 aa13.13□□□□□ -0.31
HPS3-201ENST00000296051 CHD4Q14839 1912 aa13.13□□□□□ -0.31
HPS3-201ENST00000296051 ZNF142P52746 1687 aaPredicted RBP13.13□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 43.6 ms