RNA–Protein interactions for RNA: ENST00000263694.8

SNRNP40-201, Transcript of small nuclear ribonucleoprotein U5 subunit 40, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SNRNP40, Length 1,597 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRNP40-201ENST00000263694 ARHGAP33O14559 1287 aa9.43□□□□□ -0.9
SNRNP40-201ENST00000263694 OR7A17O14581 309 aa9.43□□□□□ -0.9
SNRNP40-201ENST00000263694 PPM1DO15297 605 aa9.43□□□□□ -0.9
SNRNP40-201ENST00000263694 NOBOXO60393 691 aa9.43□□□□□ -0.9
SNRNP40-201ENST00000263694 PRAMEF4O60810 478 aa9.43□□□□□ -0.9
SNRNP40-201ENST00000263694 EDF1O60869 148 aaKnown RBP9.43□□□□□ -0.9
SNRNP40-201ENST00000263694 H2AFYO75367 372 aaKnown RBP9.43□□□□□ -0.9
SNRNP40-201ENST00000263694 KATNA1O75449 491 aa9.43□□□□□ -0.9
SNRNP40-201ENST00000263694 VIPP01282 170 aa9.43□□□□□ -0.9
SNRNP40-201ENST00000263694 RPN2P04844 631 aa9.43□□□□□ -0.9
SNRNP40-201ENST00000263694 EPORP19235 508 aa9.43□□□□□ -0.9
SNRNP40-201ENST00000263694 PSMB5P28074 263 aa9.43□□□□□ -0.9
SNRNP40-201ENST00000263694 SERPINB3P29508 390 aa9.43□□□□□ -0.9
SNRNP40-201ENST00000263694 RXRGP48443 463 aa9.43□□□□□ -0.9
SNRNP40-201ENST00000263694 ARRB1P49407 418 aaPredicted RBP9.43□□□□□ -0.9
SNRNP40-201ENST00000263694 HNMTP50135 292 aa9.43□□□□□ -0.9
SNRNP40-201ENST00000263694 TBPL1P62380 186 aa9.43□□□□□ -0.9
SNRNP40-201ENST00000263694 UBE2IP63279 158 aaKnown RBP9.43□□□□□ -0.9
SNRNP40-201ENST00000263694 SH3BP2P78314 561 aa9.43□□□□□ -0.9
SNRNP40-201ENST00000263694 GPR18Q14330 331 aa9.43□□□□□ -0.9
SNRNP40-201ENST00000263694 CDKL4Q5MAI5 379 aa9.43□□□□□ -0.9
SNRNP40-201ENST00000263694 PRAMEF9Q5VWM5 478 aa9.43□□□□□ -0.9
SNRNP40-201ENST00000263694 SLC23A3Q6PIS1 610 aa9.43□□□□□ -0.9
SNRNP40-201ENST00000263694 KANSL1Q7Z3B3 1105 aa9.43□□□□□ -0.9
SNRNP40-201ENST00000263694 SYVN1Q86TM6 617 aa9.43□□□□□ -0.9
SNRNP40-201ENST00000263694 THOC6Q86W42 341 aaKnown RBP9.43□□□□□ -0.9
SNRNP40-201ENST00000263694 FAM20CQ8IXL6 584 aa9.43□□□□□ -0.9
SNRNP40-201ENST00000263694 ARL14Q8N4G2 192 aa9.43□□□□□ -0.9
SNRNP40-201ENST00000263694 OR56A3Q8NH54 315 aa9.43□□□□□ -0.9
SNRNP40-201ENST00000263694 CEP76Q8TAP6 659 aa9.43□□□□□ -0.9
SNRNP40-201ENST00000263694 RAB3IL1Q8TBN0 382 aa9.43□□□□□ -0.9
SNRNP40-201ENST00000263694 MAGEC3Q8TD91 643 aa9.43□□□□□ -0.9
SNRNP40-201ENST00000263694 KCNA7Q96RP8 456 aa9.43□□□□□ -0.9
SNRNP40-201ENST00000263694 EPN3Q9H201 632 aa9.43□□□□□ -0.9
SNRNP40-201ENST00000263694 SLC32A1Q9H598 525 aa9.43□□□□□ -0.9
SNRNP40-201ENST00000263694 IPPKQ9H8X2 491 aa9.43□□□□□ -0.9
SNRNP40-201ENST00000263694 MID1IP1Q9NPA3 183 aa9.43□□□□□ -0.9
SNRNP40-201ENST00000263694 POLG2Q9UHN1 485 aa9.43□□□□□ -0.9
SNRNP40-201ENST00000263694 RAB23Q9ULC3 237 aa9.43□□□□□ -0.9
SNRNP40-201ENST00000263694 ANGPTL3Q9Y5C1 460 aa9.43□□□□□ -0.9
SNRNP40-201ENST00000263694 TNPO3Q9Y5L0 923 aaKnown RBP9.43□□□□□ -0.9
SNRNP40-201ENST00000263694 HEBP2Q9Y5Z4 205 aa9.43□□□□□ -0.9
SNRNP40-201ENST00000263694 COLEC10Q9Y6Z7 277 aa9.43□□□□□ -0.9
SNRNP40-201ENST00000263694 KIR2DS5A0A0G2JLQ3 304 aa9.42□□□□□ -0.9
SNRNP40-201ENST00000263694 A0A0G2JNG1 304 aa9.42□□□□□ -0.9
SNRNP40-201ENST00000263694 KIR2DS3K7RE56 304 aa9.42□□□□□ -0.9
SNRNP40-201ENST00000263694 TRIM38O00635 465 aa9.42□□□□□ -0.9
SNRNP40-201ENST00000263694 OR4F21O95013 312 aa9.42□□□□□ -0.9
SNRNP40-201ENST00000263694 NPPBP16860 134 aa9.42□□□□□ -0.9
SNRNP40-201ENST00000263694 EPHA8P29322 1005 aaPredicted RBP9.42□□□□□ -0.9
SNRNP40-201ENST00000263694 PKLRP30613 574 aa9.42□□□□□ -0.9
SNRNP40-201ENST00000263694 HOXD12P35452 270 aa9.42□□□□□ -0.9
SNRNP40-201ENST00000263694 ARL1P40616 181 aaPredicted RBP9.42□□□□□ -0.9
SNRNP40-201ENST00000263694 PIK3CGP48736 1102 aa9.42□□□□□ -0.9
SNRNP40-201ENST00000263694 FOXA1P55317 472 aa9.42□□□□□ -0.9
SNRNP40-201ENST00000263694 ERVPABLB-1P60509 514 aa9.42□□□□□ -0.9
SNRNP40-201ENST00000263694 HHEXQ03014 270 aa9.42□□□□□ -0.9
SNRNP40-201ENST00000263694 KIR2DS5Q14953 304 aa9.42□□□□□ -0.9
SNRNP40-201ENST00000263694 CYP2A13Q16696 494 aa9.42□□□□□ -0.9
SNRNP40-201ENST00000263694 SH2D4BQ5SQS7 431 aa9.42□□□□□ -0.9
SNRNP40-201ENST00000263694 THEMIS2Q5TEJ8 643 aa9.42□□□□□ -0.9
SNRNP40-201ENST00000263694 CLEC6AQ6EIG7 209 aa9.42□□□□□ -0.9
SNRNP40-201ENST00000263694 CUZD1Q86UP6 607 aa9.42□□□□□ -0.9
SNRNP40-201ENST00000263694 TCAIMQ8N3R3 496 aa9.42□□□□□ -0.9
SNRNP40-201ENST00000263694 KYQ8NBH2 561 aa9.42□□□□□ -0.9
SNRNP40-201ENST00000263694 SUMF1Q8NBK3 374 aa9.42□□□□□ -0.9
SNRNP40-201ENST00000263694 RFWD2Q8NHY2 731 aa9.42□□□□□ -0.9
SNRNP40-201ENST00000263694 SAP25Q8TEE9 199 aa9.42□□□□□ -0.9
SNRNP40-201ENST00000263694 LCN9Q8WX39 176 aa9.42□□□□□ -0.9
SNRNP40-201ENST00000263694 ATL1Q8WXF7 558 aa9.42□□□□□ -0.9
SNRNP40-201ENST00000263694 ATP6V1E2Q96A05 226 aa9.42□□□□□ -0.9
SNRNP40-201ENST00000263694 TBC1D10AQ9BXI6 508 aa9.42□□□□□ -0.9
SNRNP40-201ENST00000263694 KIR3DX1Q9H7L2 352 aa9.42□□□□□ -0.9
SNRNP40-201ENST00000263694 DNAJC11Q9NVH1 559 aa9.42□□□□□ -0.9
SNRNP40-201ENST00000263694 SPHK1Q9NYA1 384 aa9.42□□□□□ -0.9
SNRNP40-201ENST00000263694 LNPEPQ9UIQ6 1025 aa9.42□□□□□ -0.9
SNRNP40-201ENST00000263694 TIMM22Q9Y584 194 aa9.42□□□□□ -0.9
SNRNP40-201ENST00000263694 HEATR5BQ9P2D3 2071 aa9.42□□□□□ -0.9
SNRNP40-201ENST00000263694 RP1P56715 2156 aa9.42□□□□□ -0.9
SNRNP40-201ENST00000263694 MUC6Q6W4X9 2439 aa9.41□□□□□ -0.9
SNRNP40-201ENST00000263694 A0A1W2PPV9 198 aa9.41□□□□□ -0.9
SNRNP40-201ENST00000263694 OR5K4A6NMS3 321 aa9.41□□□□□ -0.9
SNRNP40-201ENST00000263694 BTN3A3O00478 584 aa9.41□□□□□ -0.9
SNRNP40-201ENST00000263694 CASC3O15234 703 aaKnown RBP9.41□□□□□ -0.9
SNRNP40-201ENST00000263694 JUNP05412 331 aaKnown RBP9.41□□□□□ -0.9
SNRNP40-201ENST00000263694 NUDT7P0C024 238 aa9.41□□□□□ -0.9
SNRNP40-201ENST00000263694 ERGP11308 486 aa9.41□□□□□ -0.9
SNRNP40-201ENST00000263694 EPB42P16452 691 aa9.41□□□□□ -0.9
SNRNP40-201ENST00000263694 ENGP17813 658 aa9.41□□□□□ -0.9
SNRNP40-201ENST00000263694 PEBP1P30086 187 aaKnown RBP9.41□□□□□ -0.9
SNRNP40-201ENST00000263694 RAB28P51157 221 aa9.41□□□□□ -0.9
SNRNP40-201ENST00000263694 CCNG1P51959 295 aa9.41□□□□□ -0.9
SNRNP40-201ENST00000263694 TRAF3Q13114 568 aa9.41□□□□□ -0.9
SNRNP40-201ENST00000263694 PLCL1Q15111 1095 aa9.41□□□□□ -0.9
SNRNP40-201ENST00000263694 SF3A2Q15428 464 aaKnown RBP9.41□□□□□ -0.9
SNRNP40-201ENST00000263694 TCHHL1Q5QJ38 904 aaPredicted RBP9.41□□□□□ -0.9
SNRNP40-201ENST00000263694 CAPN13Q6MZZ7 669 aaPredicted RBP9.41□□□□□ -0.9
SNRNP40-201ENST00000263694 LETMD1Q6P1Q0 360 aa9.41□□□□□ -0.9
SNRNP40-201ENST00000263694 OGFOD3Q6PK18 319 aa9.41□□□□□ -0.9
SNRNP40-201ENST00000263694 RABEPKQ7Z6M1 372 aa9.41□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 49.7 ms