RNA–Protein interactions for RNA: ENST00000257181.9

PRPF38A-201, Transcript of pre-mRNA processing factor 38A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PRPF38A, Length 5,274 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF38A-201ENST00000257181 THOC6Q86W42 341 aaKnown RBP13.1□□□□□ -0.31
PRPF38A-201ENST00000257181 SLC5A8Q8N695 610 aa13.1□□□□□ -0.31
PRPF38A-201ENST00000257181 ACVR1CQ8NER5 493 aa13.1□□□□□ -0.31
PRPF38A-201ENST00000257181 TMEM109Q9BVC6 243 aa13.1□□□□□ -0.31
PRPF38A-201ENST00000257181 NDUFA13Q9P0J0 144 aa13.1□□□□□ -0.31
PRPF38A-201ENST00000257181 AP4S1Q9Y587 144 aa13.1□□□□□ -0.31
PRPF38A-201ENST00000257181 BMP6P22004 513 aa13.1□□□□□ -0.31
PRPF38A-201ENST00000257181 STC1P52823 247 aa13.1□□□□□ -0.31
PRPF38A-201ENST00000257181 RAB15P59190 212 aa13.1□□□□□ -0.31
PRPF38A-201ENST00000257181 ADCK1Q86TW2 530 aa13.1□□□□□ -0.31
PRPF38A-201ENST00000257181 EXOC3L1Q86VI1 746 aa13.1□□□□□ -0.31
PRPF38A-201ENST00000257181 ZDHHC13Q8IUH4 622 aa13.1□□□□□ -0.31
PRPF38A-201ENST00000257181 OR4E2Q8NGC2 313 aa13.1□□□□□ -0.31
PRPF38A-201ENST00000257181 SLC35B2Q8TB61 432 aa13.1□□□□□ -0.31
PRPF38A-201ENST00000257181 ZFPM2Q8WW38 1151 aa13.1□□□□□ -0.31
PRPF38A-201ENST00000257181 NOL11Q9H8H0 719 aaKnown RBP13.1□□□□□ -0.31
PRPF38A-201ENST00000257181 KLRF1Q9NZS2 232 aa13.1□□□□□ -0.31
PRPF38A-201ENST00000257181 PCDHGB7Q9Y5F8 929 aa13.1□□□□□ -0.31
PRPF38A-201ENST00000257181 RGPD3A6NKT7 1758 aaPredicted RBP13.1□□□□□ -0.31
PRPF38A-201ENST00000257181 RGPD4Q7Z3J3 1758 aa13.1□□□□□ -0.31
PRPF38A-201ENST00000257181 CACNG3O60359 315 aa13.1□□□□□ -0.31
PRPF38A-201ENST00000257181 ZNF311Q5JNZ3 666 aa13.1□□□□□ -0.31
PRPF38A-201ENST00000257181 AENQ8WTP8 325 aaKnown RBP13.1□□□□□ -0.31
PRPF38A-201ENST00000257181 KBTBD7Q8WVZ9 684 aa13.1□□□□□ -0.31
PRPF38A-201ENST00000257181 FATE1Q969F0 183 aa13.1□□□□□ -0.31
PRPF38A-201ENST00000257181 SCRN2Q96FV2 425 aa13.1□□□□□ -0.31
PRPF38A-201ENST00000257181 FUT8Q9BYC5 575 aa13.1□□□□□ -0.31
PRPF38A-201ENST00000257181 THAP10Q9P2Z0 257 aaPredicted RBP13.1□□□□□ -0.31
PRPF38A-201ENST00000257181 LCHNA4D1U4 455 aa13.1□□□□□ -0.31
PRPF38A-201ENST00000257181 PCDH17O14917 1159 aa13.1□□□□□ -0.31
PRPF38A-201ENST00000257181 SLC35G1Q2M3R5 365 aa13.1□□□□□ -0.31
PRPF38A-201ENST00000257181 ALKAL1Q6UXT8 129 aa13.1□□□□□ -0.31
PRPF38A-201ENST00000257181 SPATA22Q8NHS9 363 aa13.1□□□□□ -0.31
PRPF38A-201ENST00000257181 THRSPQ92748 146 aa13.1□□□□□ -0.31
PRPF38A-201ENST00000257181 ZBTB9Q96C00 473 aa13.1□□□□□ -0.31
PRPF38A-201ENST00000257181 OLFM1Q99784 485 aa13.1□□□□□ -0.31
PRPF38A-201ENST00000257181 IL37Q9NZH6 218 aa13.1□□□□□ -0.31
PRPF38A-201ENST00000257181 VPS29Q9UBQ0 182 aa13.1□□□□□ -0.31
PRPF38A-201ENST00000257181 MMP17Q9ULZ9 603 aa13.1□□□□□ -0.31
PRPF38A-201ENST00000257181 POLR3HQ9Y535 204 aaPredicted RBP13.1□□□□□ -0.31
PRPF38A-201ENST00000257181 TTC34A8MYJ7 566 aa13.09□□□□□ -0.31
PRPF38A-201ENST00000257181 CDC7O00311 574 aa13.09□□□□□ -0.31
PRPF38A-201ENST00000257181 EPHB6O15197 1021 aa13.09□□□□□ -0.31
PRPF38A-201ENST00000257181 PEX11AO75192 247 aa13.09□□□□□ -0.31
PRPF38A-201ENST00000257181 SCELO95171 688 aa13.09□□□□□ -0.31
PRPF38A-201ENST00000257181 POU1F1P28069 291 aa13.09□□□□□ -0.31
PRPF38A-201ENST00000257181 CLK1P49759 484 aaKnown RBP13.09□□□□□ -0.31
PRPF38A-201ENST00000257181 INHBCP55103 352 aa13.09□□□□□ -0.31
PRPF38A-201ENST00000257181 ZBTB6Q15916 424 aa13.09□□□□□ -0.31
PRPF38A-201ENST00000257181 TICAM1Q8IUC6 712 aa13.09□□□□□ -0.31
PRPF38A-201ENST00000257181 PIGXQ8TBF5 258 aa13.09□□□□□ -0.31
PRPF38A-201ENST00000257181 APOLD1Q96LR9 279 aa13.09□□□□□ -0.31
PRPF38A-201ENST00000257181 AGAP2Q99490 1192 aa13.09□□□□□ -0.31
PRPF38A-201ENST00000257181 STRA6Q9BX79 667 aa13.09□□□□□ -0.31
PRPF38A-201ENST00000257181 TMEM59LQ9UK28 342 aa13.09□□□□□ -0.31
PRPF38A-201ENST00000257181 KCNK6Q9Y257 313 aa13.09□□□□□ -0.31
PRPF38A-201ENST00000257181 REM1O75628 298 aa13.09□□□□□ -0.31
PRPF38A-201ENST00000257181 TOP3BO95985 862 aaKnown RBP13.09□□□□□ -0.31
PRPF38A-201ENST00000257181 NR2F6P10588 404 aa13.09□□□□□ -0.31
PRPF38A-201ENST00000257181 ACADSP16219 412 aa13.09□□□□□ -0.31
PRPF38A-201ENST00000257181 RGS8P57771 180 aaPredicted RBP13.09□□□□□ -0.31
PRPF38A-201ENST00000257181 EPHX4Q8IUS5 362 aa13.09□□□□□ -0.31
PRPF38A-201ENST00000257181 HHIPQ96QV1 700 aa13.09□□□□□ -0.31
PRPF38A-201ENST00000257181 PPIEQ9UNP9 301 aaKnown RBP13.09□□□□□ -0.31
PRPF38A-201ENST00000257181 ADAMTS7Q9UKP4 1686 aa13.09□□□□□ -0.31
PRPF38A-201ENST00000257181 KCNC1P48547 511 aa13.09□□□□□ -0.31
PRPF38A-201ENST00000257181 OR4D2P58180 307 aa13.09□□□□□ -0.31
PRPF38A-201ENST00000257181 DSG2Q14126 1118 aa13.09□□□□□ -0.31
PRPF38A-201ENST00000257181 RCN1Q15293 331 aa13.09□□□□□ -0.31
PRPF38A-201ENST00000257181 ADGRD1Q6QNK2 874 aa13.09□□□□□ -0.31
PRPF38A-201ENST00000257181 RNF44Q7L0R7 432 aa13.09□□□□□ -0.31
PRPF38A-201ENST00000257181 OR2AJ1Q8NGZ0 328 aa13.09□□□□□ -0.31
PRPF38A-201ENST00000257181 FBXO30Q8TB52 745 aa13.09□□□□□ -0.31
PRPF38A-201ENST00000257181 SLC9A6Q92581 669 aa13.09□□□□□ -0.31
PRPF38A-201ENST00000257181 KCNC2Q96PR1 638 aa13.09□□□□□ -0.31
PRPF38A-201ENST00000257181 ZNF347Q96SE7 839 aa13.09□□□□□ -0.31
PRPF38A-201ENST00000257181 CWH43Q9H720 699 aa13.09□□□□□ -0.31
PRPF38A-201ENST00000257181 ACSS2Q9NR19 701 aa13.09□□□□□ -0.31
PRPF38A-201ENST00000257181 NENFQ9UMX5 172 aa13.09□□□□□ -0.31
PRPF38A-201ENST00000257181 IGLON5A6NGN9 336 aa13.09□□□□□ -0.31
PRPF38A-201ENST00000257181 P04436 131 aa13.09□□□□□ -0.31
PRPF38A-201ENST00000257181 NQO1P15559 274 aaKnown RBP13.09□□□□□ -0.31
PRPF38A-201ENST00000257181 ZNF8P17098 575 aaPredicted RBP13.09□□□□□ -0.31
PRPF38A-201ENST00000257181 SLC25A11Q02978 314 aaKnown RBP13.09□□□□□ -0.31
PRPF38A-201ENST00000257181 PCDHB16Q9NRJ7 776 aa13.09□□□□□ -0.31
PRPF38A-201ENST00000257181 TNFRSF10CO14798 259 aa13.08□□□□□ -0.31
PRPF38A-201ENST00000257181 POLR1CO15160 346 aaPredicted RBP13.08□□□□□ -0.31
PRPF38A-201ENST00000257181 PCDH7O60245 1069 aa13.08□□□□□ -0.31
PRPF38A-201ENST00000257181 BPGMP07738 259 aa13.08□□□□□ -0.31
PRPF38A-201ENST00000257181 SRCP12931 536 aa13.08□□□□□ -0.31
PRPF38A-201ENST00000257181 CXCR1P25024 350 aa13.08□□□□□ -0.31
PRPF38A-201ENST00000257181 NUBP1P53384 320 aa13.08□□□□□ -0.31
PRPF38A-201ENST00000257181 TCEAL6Q6IPX3 200 aa13.08□□□□□ -0.31
PRPF38A-201ENST00000257181 TMIGD1Q6UXZ0 262 aa13.08□□□□□ -0.31
PRPF38A-201ENST00000257181 HFE2Q6ZVN8 426 aa13.08□□□□□ -0.31
PRPF38A-201ENST00000257181 GAREM2Q75VX8 874 aa13.08□□□□□ -0.31
PRPF38A-201ENST00000257181 PEG10Q86TG7 708 aaKnown RBP13.08□□□□□ -0.31
PRPF38A-201ENST00000257181 EXOSC8Q96B26 276 aaKnown RBP13.08□□□□□ -0.31
PRPF38A-201ENST00000257181 ASPNQ9BXN1 380 aa13.08□□□□□ -0.31
PRPF38A-201ENST00000257181 PBX4Q9BYU1 374 aa13.08□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 39.5 ms