RNA–Protein interactions for RNA: ENST00000201963.3

DNMT3B-201, Transcript of DNA methyltransferase 3 beta, humanhuman

TSL 1 (best) BASIC

Gene DNMT3B, Length 4,255 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DNMT3B-201ENST00000201963 PGRP06401 933 aa11.29□□□□□ -0.6
DNMT3B-201ENST00000201963 RFX3P48380 749 aa11.29□□□□□ -0.6
DNMT3B-201ENST00000201963 DGKEP52429 567 aa11.29□□□□□ -0.6
DNMT3B-201ENST00000201963 TIGD5Q53EQ6 642 aa11.29□□□□□ -0.6
DNMT3B-201ENST00000201963 FAM72AQ5TYM5 149 aa11.29□□□□□ -0.6
DNMT3B-201ENST00000201963 FAM72DQ6L9T8 149 aa11.29□□□□□ -0.6
DNMT3B-201ENST00000201963 CARM1Q86X55 608 aa11.29□□□□□ -0.6
DNMT3B-201ENST00000201963 FAM72BQ86X60 149 aa11.29□□□□□ -0.6
DNMT3B-201ENST00000201963 MINDY1Q8N5J2 469 aa11.29□□□□□ -0.6
DNMT3B-201ENST00000201963 TMEM102Q8N9M5 508 aaPredicted RBP11.29□□□□□ -0.6
DNMT3B-201ENST00000201963 ARMC1Q9NVT9 282 aa11.29□□□□□ -0.6
DNMT3B-201ENST00000201963 ZIM2Q9NZV7 527 aa11.29□□□□□ -0.6
DNMT3B-201ENST00000201963 PCDHB8Q9UN66 801 aa11.29□□□□□ -0.6
DNMT3B-201ENST00000201963 ZSCAN5BA6NJL1 495 aa11.29□□□□□ -0.6
DNMT3B-201ENST00000201963 I3L521 148 aa11.29□□□□□ -0.6
DNMT3B-201ENST00000201963 AP1G1O43747 822 aa11.29□□□□□ -0.6
DNMT3B-201ENST00000201963 DYRK3O43781 588 aa11.29□□□□□ -0.6
DNMT3B-201ENST00000201963 PPP5CP53041 499 aa11.29□□□□□ -0.6
DNMT3B-201ENST00000201963 RPS14P62263 151 aaKnown RBP11.29□□□□□ -0.6
DNMT3B-201ENST00000201963 SPANXN4Q5MJ08 99 aa11.29□□□□□ -0.6
DNMT3B-201ENST00000201963 LCN1P1Q5VSP4 162 aa11.29□□□□□ -0.6
DNMT3B-201ENST00000201963 NUDT18Q6ZVK8 323 aa11.29□□□□□ -0.6
DNMT3B-201ENST00000201963 ELMOD2Q8IZ81 293 aa11.29□□□□□ -0.6
DNMT3B-201ENST00000201963 OR8H3Q8N146 312 aa11.29□□□□□ -0.6
DNMT3B-201ENST00000201963 DNAJC5GQ8N7S2 189 aa11.29□□□□□ -0.6
DNMT3B-201ENST00000201963 KREMEN2Q8NCW0 462 aa11.29□□□□□ -0.6
DNMT3B-201ENST00000201963 ATL1Q8WXF7 558 aa11.29□□□□□ -0.6
DNMT3B-201ENST00000201963 TMEM159Q96B96 161 aa11.29□□□□□ -0.6
DNMT3B-201ENST00000201963 HMCESQ96FZ2 354 aa11.29□□□□□ -0.6
DNMT3B-201ENST00000201963 POLR2J2Q9GZM3 115 aaKnown RBP11.29□□□□□ -0.6
DNMT3B-201ENST00000201963 FAM118AQ9NWS6 357 aa11.29□□□□□ -0.6
DNMT3B-201ENST00000201963 CLEC4AQ9UMR7 237 aa11.29□□□□□ -0.6
DNMT3B-201ENST00000201963 DERAQ9Y315 318 aa11.29□□□□□ -0.6
DNMT3B-201ENST00000201963 PCDHGC4Q9Y5F7 938 aa11.29□□□□□ -0.6
DNMT3B-201ENST00000201963 PCDHGA4Q9Y5G9 962 aa11.29□□□□□ -0.6
DNMT3B-201ENST00000201963 SLC1A7O00341 560 aa11.28□□□□□ -0.6
DNMT3B-201ENST00000201963 COQ9O75208 318 aa11.28□□□□□ -0.6
DNMT3B-201ENST00000201963 CREG1O75629 220 aa11.28□□□□□ -0.6
DNMT3B-201ENST00000201963 TRBC1P01850 177 aa11.28□□□□□ -0.6
DNMT3B-201ENST00000201963 OR56A5P0C7T3 313 aa11.28□□□□□ -0.6
DNMT3B-201ENST00000201963 ITPKAP23677 461 aa11.28□□□□□ -0.6
DNMT3B-201ENST00000201963 GSTM2P28161 218 aa11.28□□□□□ -0.6
DNMT3B-201ENST00000201963 RPL9P32969 192 aaKnown RBP11.28□□□□□ -0.6
DNMT3B-201ENST00000201963 PTGS2P35354 604 aa11.28□□□□□ -0.6
DNMT3B-201ENST00000201963 CAMK2GQ13555 558 aaPredicted RBP11.28□□□□□ -0.6
DNMT3B-201ENST00000201963 PTPRCAPQ14761 206 aa11.28□□□□□ -0.6
DNMT3B-201ENST00000201963 BICRALQ6AI39 1079 aa11.28□□□□□ -0.6
DNMT3B-201ENST00000201963 LCN8Q6JVE9 175 aa11.28□□□□□ -0.6
DNMT3B-201ENST00000201963 NTAN1Q96AB6 310 aa11.28□□□□□ -0.6
DNMT3B-201ENST00000201963 ACDQ96AP0 544 aa11.28□□□□□ -0.6
DNMT3B-201ENST00000201963 IL4I1Q96RQ9 567 aa11.28□□□□□ -0.6
DNMT3B-201ENST00000201963 PAAF1Q9BRP4 392 aa11.28□□□□□ -0.6
DNMT3B-201ENST00000201963 MED28Q9H204 178 aa11.28□□□□□ -0.6
DNMT3B-201ENST00000201963 DIABLOQ9NR28 239 aa11.28□□□□□ -0.6
DNMT3B-201ENST00000201963 MKLN1Q9UL63 735 aa11.28□□□□□ -0.6
DNMT3B-201ENST00000201963 BRWD1Q9NSI6 2320 aa11.28□□□□□ -0.6
DNMT3B-201ENST00000201963 TIAM2Q8IVF5 1701 aa11.28□□□□□ -0.6
DNMT3B-201ENST00000201963 ZCWPW2A0A1B0GU75 182 aa11.28□□□□□ -0.6
DNMT3B-201ENST00000201963 SLC25A14O95258 325 aaPredicted RBP11.28□□□□□ -0.6
DNMT3B-201ENST00000201963 PRKAG1P54619 331 aa11.28□□□□□ -0.6
DNMT3B-201ENST00000201963 UGT2B15P54855 530 aa11.28□□□□□ -0.6
DNMT3B-201ENST00000201963 CASP9P55211 416 aa11.28□□□□□ -0.6
DNMT3B-201ENST00000201963 ST8SIA6P61647 398 aa11.28□□□□□ -0.6
DNMT3B-201ENST00000201963 WDR5P61964 334 aaKnown RBP11.28□□□□□ -0.6
DNMT3B-201ENST00000201963 BCL2L1Q07817 233 aa11.28□□□□□ -0.6
DNMT3B-201ENST00000201963 LGALS3BPQ08380 585 aa11.28□□□□□ -0.6
DNMT3B-201ENST00000201963 USP39Q53GS9 565 aaKnown RBP11.28□□□□□ -0.6
DNMT3B-201ENST00000201963 XKR6Q5GH73 641 aa11.28□□□□□ -0.6
DNMT3B-201ENST00000201963 DDX59Q5T1V6 619 aaKnown RBP eCLIP11.28□□□□□ -0.6
DNMT3B-201ENST00000201963 RETSATQ6NUM9 610 aa11.28□□□□□ -0.6
DNMT3B-201ENST00000201963 ERICH5Q6P6B1 374 aa11.28□□□□□ -0.6
DNMT3B-201ENST00000201963 DEF8Q6ZN54 512 aa11.28□□□□□ -0.6
DNMT3B-201ENST00000201963 CIR1Q86X95 450 aaPredicted RBP11.28□□□□□ -0.6
DNMT3B-201ENST00000201963 SLC22A4Q9H015 551 aa11.28□□□□□ -0.6
DNMT3B-201ENST00000201963 MEAF6Q9HAF1 191 aa11.28□□□□□ -0.6
DNMT3B-201ENST00000201963 CMTM6Q9NX76 183 aa11.28□□□□□ -0.6
DNMT3B-201ENST00000201963 AGO1Q9UL18 857 aaKnown RBP11.28□□□□□ -0.6
DNMT3B-201ENST00000201963 RWDD3Q9Y3V2 267 aa11.28□□□□□ -0.6
DNMT3B-201ENST00000201963 DNAJC15Q9Y5T4 150 aa11.28□□□□□ -0.6
DNMT3B-201ENST00000201963 MAGED1Q9Y5V3 778 aaPredicted RBP11.28□□□□□ -0.6
DNMT3B-201ENST00000201963 SCN4AP35499 1836 aa11.28□□□□□ -0.6
DNMT3B-201ENST00000201963 SLC10A7Q0GE19 358 aa11.28□□□□□ -0.6
DNMT3B-201ENST00000201963 INCA1Q0VD86 236 aa11.28□□□□□ -0.6
DNMT3B-201ENST00000201963 MTA1Q13330 715 aa11.28□□□□□ -0.6
DNMT3B-201ENST00000201963 SNAPC1Q16533 368 aa11.28□□□□□ -0.6
DNMT3B-201ENST00000201963 CLEC20AQ6ZU45 233 aa11.28□□□□□ -0.6
DNMT3B-201ENST00000201963 DPP10Q8N608 796 aa11.28□□□□□ -0.6
DNMT3B-201ENST00000201963 ACVR1CQ8NER5 493 aa11.28□□□□□ -0.6
DNMT3B-201ENST00000201963 OR6K2Q8NGY2 324 aa11.28□□□□□ -0.6
DNMT3B-201ENST00000201963 TMEM203Q969S6 136 aa11.28□□□□□ -0.6
DNMT3B-201ENST00000201963 C11orf24Q96F05 449 aaPredicted RBP11.28□□□□□ -0.6
DNMT3B-201ENST00000201963 ZNF641Q96N77 438 aaPredicted RBP11.28□□□□□ -0.6
DNMT3B-201ENST00000201963 SLC30A2Q9BRI3 323 aa11.28□□□□□ -0.6
DNMT3B-201ENST00000201963 EBPLQ9BY08 206 aa11.28□□□□□ -0.6
DNMT3B-201ENST00000201963 DSN1Q9H410 356 aa11.28□□□□□ -0.6
DNMT3B-201ENST00000201963 TLR9Q9NR96 1032 aa11.28□□□□□ -0.6
DNMT3B-201ENST00000201963 MTPAPQ9NVV4 582 aaKnown RBP eCLIP11.28□□□□□ -0.6
DNMT3B-201ENST00000201963 SMIM30A4D0T7 59 aa11.27□□□□□ -0.6
DNMT3B-201ENST00000201963 ISPDA4D126 451 aa11.27□□□□□ -0.6
DNMT3B-201ENST00000201963 DFNA5O60443 496 aa11.27□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 27.4 ms