RNA–Protein interactions for RNA: ENSMUST00000044166.8

Cdc40-201, Transcript of Pre-mRNA-processing factor 17, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Cdc40, Length 3,534 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Cdc40-201ENSMUST00000044166 Vopp1Q8R1C3 172 aa8.11□□□□□ -1.11
Cdc40-201ENSMUST00000044166 Rbm4bQ8VE92 357 aaKnown RBP8.11□□□□□ -1.11
Cdc40-201ENSMUST00000044166 Olfr677Q8VF06 312 aa8.11□□□□□ -1.11
Cdc40-201ENSMUST00000044166 Asb6Q91ZU1 418 aa8.11□□□□□ -1.11
Cdc40-201ENSMUST00000044166 Rpl17Q9CPR4 184 aaKnown RBP8.11□□□□□ -1.11
Cdc40-201ENSMUST00000044166 Them5Q9CQJ0 248 aa8.11□□□□□ -1.11
Cdc40-201ENSMUST00000044166 Ilf2Q9CXY6 390 aaKnown RBP8.11□□□□□ -1.11
Cdc40-201ENSMUST00000044166 Dimt1Q9D0D4 313 aaKnown RBP8.11□□□□□ -1.11
Cdc40-201ENSMUST00000044166 Ttyh1Q9D3A9 450 aa8.11□□□□□ -1.11
Cdc40-201ENSMUST00000044166 Q9D5Y0 588 aa8.11□□□□□ -1.11
Cdc40-201ENSMUST00000044166 Cyp2c55Q9D816 490 aa8.11□□□□□ -1.11
Cdc40-201ENSMUST00000044166 Fam122aQ9DB52 284 aa8.11□□□□□ -1.11
Cdc40-201ENSMUST00000044166 Ttll8A4Q9F1 832 aa8.1□□□□□ -1.11
Cdc40-201ENSMUST00000044166 Ptchd4B9EKX1 904 aa8.1□□□□□ -1.11
Cdc40-201ENSMUST00000044166 Gm5152L7N200 190 aa8.1□□□□□ -1.11
Cdc40-201ENSMUST00000044166 Ikzf3O08900 507 aa8.1□□□□□ -1.11
Cdc40-201ENSMUST00000044166 Ncam2O35136 837 aa8.1□□□□□ -1.11
Cdc40-201ENSMUST00000044166 Znf143O70230 638 aa8.1□□□□□ -1.11
Cdc40-201ENSMUST00000044166 Fth1P09528 182 aa8.1□□□□□ -1.11
Cdc40-201ENSMUST00000044166 Zfp59P16373 634 aa8.1□□□□□ -1.11
Cdc40-201ENSMUST00000044166 Hmx3P42581 356 aa8.1□□□□□ -1.11
Cdc40-201ENSMUST00000044166 TubP50586 505 aa8.1□□□□□ -1.11
Cdc40-201ENSMUST00000044166 Nudt2P56380 147 aa8.1□□□□□ -1.11
Cdc40-201ENSMUST00000044166 MtpnP62774 118 aa8.1□□□□□ -1.11
Cdc40-201ENSMUST00000044166 Hrh2P97292 397 aa8.1□□□□□ -1.11
Cdc40-201ENSMUST00000044166 PamP97467 979 aa8.1□□□□□ -1.11
Cdc40-201ENSMUST00000044166 Sdr16c6Q05A13 316 aa8.1□□□□□ -1.11
Cdc40-201ENSMUST00000044166 Cyb5r4Q3TDX8 528 aa8.1□□□□□ -1.11
Cdc40-201ENSMUST00000044166 Fam131bQ3TY60 332 aa8.1□□□□□ -1.11
Cdc40-201ENSMUST00000044166 Gdi2Q61598 445 aaKnown RBP8.1□□□□□ -1.11
Cdc40-201ENSMUST00000044166 Tas2r125Q7M710 311 aa8.1□□□□□ -1.11
Cdc40-201ENSMUST00000044166 Fbxo9Q8BK06 437 aa8.1□□□□□ -1.11
Cdc40-201ENSMUST00000044166 Galnt6Q8C7U7 622 aa8.1□□□□□ -1.11
Cdc40-201ENSMUST00000044166 Q8CCC3 530 aa8.1□□□□□ -1.11
Cdc40-201ENSMUST00000044166 Celf3Q8CIN6 465 aa8.1□□□□□ -1.11
Cdc40-201ENSMUST00000044166 Zfp940Q8R2Q3 566 aa8.1□□□□□ -1.11
Cdc40-201ENSMUST00000044166 Lsm1Q8VC85 133 aa8.1□□□□□ -1.11
Cdc40-201ENSMUST00000044166 Idh3bQ91VA7 384 aa8.1□□□□□ -1.11
Cdc40-201ENSMUST00000044166 Dusp7Q91Z46 422 aa8.1□□□□□ -1.11
Cdc40-201ENSMUST00000044166 MrgpreQ91ZB7 310 aa8.1□□□□□ -1.11
Cdc40-201ENSMUST00000044166 Atoh8Q99NA2 322 aa8.1□□□□□ -1.11
Cdc40-201ENSMUST00000044166 Metap1dQ9CPW9 335 aa8.1□□□□□ -1.11
Cdc40-201ENSMUST00000044166 Adgrf4Q9D2L6 698 aa8.1□□□□□ -1.11
Cdc40-201ENSMUST00000044166 Tchhl1Q9D3P1 638 aa8.1□□□□□ -1.11
Cdc40-201ENSMUST00000044166 Phf10Q9D8M7 497 aa8.1□□□□□ -1.11
Cdc40-201ENSMUST00000044166 Aldh6a1Q9EQ20 535 aaKnown RBP8.1□□□□□ -1.11
Cdc40-201ENSMUST00000044166 Sae1Q9R1T2 350 aa8.1□□□□□ -1.11
Cdc40-201ENSMUST00000044166 Celf5D3Z4T1 395 aaKnown RBP8.1□□□□□ -1.11
Cdc40-201ENSMUST00000044166 Gm20828J3KMI7 228 aa8.1□□□□□ -1.11
Cdc40-201ENSMUST00000044166 Hps1O08983 704 aa8.1□□□□□ -1.11
Cdc40-201ENSMUST00000044166 Klrk1O54709 232 aa8.1□□□□□ -1.11
Cdc40-201ENSMUST00000044166 Teddm2Q208S0 260 aa8.1□□□□□ -1.11
Cdc40-201ENSMUST00000044166 Rhox4fQ2MDF8 205 aa8.1□□□□□ -1.11
Cdc40-201ENSMUST00000044166 Rhox4cQ2MDG1 205 aa8.1□□□□□ -1.11
Cdc40-201ENSMUST00000044166 Lpcat1Q3TFD2 534 aa8.1□□□□□ -1.11
Cdc40-201ENSMUST00000044166 Q3UJP5 209 aa8.1□□□□□ -1.11
Cdc40-201ENSMUST00000044166 Fam189a2Q4FZH1 290 aa8.1□□□□□ -1.11
Cdc40-201ENSMUST00000044166 Zfp943Q6NZP4 507 aa8.1□□□□□ -1.11
Cdc40-201ENSMUST00000044166 Ckmt2Q6P8J7 419 aa8.1□□□□□ -1.11
Cdc40-201ENSMUST00000044166 Cdc14bQ6PFY9 485 aa8.1□□□□□ -1.11
Cdc40-201ENSMUST00000044166 Ckap4Q8BMK4 575 aaKnown RBP8.1□□□□□ -1.11
Cdc40-201ENSMUST00000044166 Pik3cbQ8BTI9 1064 aa8.1□□□□□ -1.11
Cdc40-201ENSMUST00000044166 Tgm4Q8BZH1 670 aa8.1□□□□□ -1.11
Cdc40-201ENSMUST00000044166 PdgfcQ8CI19 345 aa8.1□□□□□ -1.11
Cdc40-201ENSMUST00000044166 Syn3Q8JZP2 579 aa8.1□□□□□ -1.11
Cdc40-201ENSMUST00000044166 Olfr215Q8VF82 310 aa8.1□□□□□ -1.11
Cdc40-201ENSMUST00000044166 Fig4Q91WF7 907 aa8.1□□□□□ -1.11
Cdc40-201ENSMUST00000044166 Tmed11Q9D2R4 215 aa8.1□□□□□ -1.11
Cdc40-201ENSMUST00000044166 Rhox4aQ9D3I8 205 aa8.1□□□□□ -1.11
Cdc40-201ENSMUST00000044166 GabarapQ9DCD6 117 aa8.1□□□□□ -1.11
Cdc40-201ENSMUST00000044166 Tmod3Q9JHJ0 352 aa8.1□□□□□ -1.11
Cdc40-201ENSMUST00000044166 RangrfQ9JIB0 185 aa8.1□□□□□ -1.11
Cdc40-201ENSMUST00000044166 DguokQ9QX60 277 aa8.1□□□□□ -1.11
Cdc40-201ENSMUST00000044166 Fbxo8Q9QZN3 319 aa8.1□□□□□ -1.11
Cdc40-201ENSMUST00000044166 Plod2Q9R0B9 737 aa8.1□□□□□ -1.11
Cdc40-201ENSMUST00000044166 Ralgapa2A3KGS3 1872 aa8.1□□□□□ -1.11
Cdc40-201ENSMUST00000044166 Lipo4D3Z608 396 aa8.09□□□□□ -1.11
Cdc40-201ENSMUST00000044166 Zfp384E9Q1A5 584 aaKnown RBP8.09□□□□□ -1.11
Cdc40-201ENSMUST00000044166 Ctnnd2O35927 1247 aa8.09□□□□□ -1.11
Cdc40-201ENSMUST00000044166 Limk2O54785 638 aa8.09□□□□□ -1.11
Cdc40-201ENSMUST00000044166 Serpina3cP29621 417 aa8.09□□□□□ -1.11
Cdc40-201ENSMUST00000044166 Rab8aP55258 207 aa8.09□□□□□ -1.11
Cdc40-201ENSMUST00000044166 Arhgap39P59281 1107 aa8.09□□□□□ -1.11
Cdc40-201ENSMUST00000044166 Csnk2bP67871 215 aaKnown RBP8.09□□□□□ -1.11
Cdc40-201ENSMUST00000044166 Samd12Q0VE29 161 aa8.09□□□□□ -1.11
Cdc40-201ENSMUST00000044166 Krt76Q3UV17 594 aaKnown RBP8.09□□□□□ -1.11
Cdc40-201ENSMUST00000044166 Rbbp7Q60973 425 aaKnown RBP8.09□□□□□ -1.11
Cdc40-201ENSMUST00000044166 Smarcd1Q61466 515 aaKnown RBP8.09□□□□□ -1.11
Cdc40-201ENSMUST00000044166 Fstl1Q62356 306 aa8.09□□□□□ -1.11
Cdc40-201ENSMUST00000044166 Olfr1415Q7TQS4 311 aa8.09□□□□□ -1.11
Cdc40-201ENSMUST00000044166 Mrps7Q80X85 242 aaKnown RBP8.09□□□□□ -1.11
Cdc40-201ENSMUST00000044166 Fam92aQ8BP22 355 aa8.09□□□□□ -1.11
Cdc40-201ENSMUST00000044166 Hus1Q8BQY8 280 aa8.09□□□□□ -1.11
Cdc40-201ENSMUST00000044166 Ldhal6bQ8BVP2 382 aa8.09□□□□□ -1.11
Cdc40-201ENSMUST00000044166 Gpr22Q8BZL4 432 aa8.09□□□□□ -1.11
Cdc40-201ENSMUST00000044166 Slc16a13Q8CE94 428 aa8.09□□□□□ -1.11
Cdc40-201ENSMUST00000044166 Nedd4lQ8CFI0 1004 aa8.09□□□□□ -1.11
Cdc40-201ENSMUST00000044166 Olfr1416Q8VGU4 312 aa8.09□□□□□ -1.11
Cdc40-201ENSMUST00000044166 Pcdhb21Q91V48 774 aa8.09□□□□□ -1.11
Cdc40-201ENSMUST00000044166 Scpep1Q920A5 452 aa8.09□□□□□ -1.11
Retrieved 100 of 22,080 RNA–protein pairs in 26.8 ms