RNA–Protein interactions for RNA: ENSMUST00000041643.3

Pcif1-201, Transcript of Phosphorylated CTD-interacting factor 1, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Pcif1, Length 5,772 nt, Biotype protein coding, Subcellular localisation Cytoplasm .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Pcif1-201ENSMUST00000041643 Mtnd4P03911 459 aa11.62□□□□□ -0.55
Pcif1-201ENSMUST00000041643 Paqr9Q6TCG2 375 aa11.62□□□□□ -0.55
Pcif1-201ENSMUST00000041643 Nat14Q8BVG8 206 aa11.62□□□□□ -0.55
Pcif1-201ENSMUST00000041643 Slc9a8Q8R4D1 576 aa11.62□□□□□ -0.55
Pcif1-201ENSMUST00000041643 Olfr700Q8VFM5 316 aa11.62□□□□□ -0.55
Pcif1-201ENSMUST00000041643 Pex6Q99LC9 981 aa11.62□□□□□ -0.55
Pcif1-201ENSMUST00000041643 Gm26657Q9CVR1 127 aa11.62□□□□□ -0.55
Pcif1-201ENSMUST00000041643 Aar2Q9D2V5 384 aa11.62□□□□□ -0.55
Pcif1-201ENSMUST00000041643 Tysnd1Q9DBA6 568 aa11.62□□□□□ -0.55
Pcif1-201ENSMUST00000041643 Kctd17E0CYQ0 296 aa11.62□□□□□ -0.55
Pcif1-201ENSMUST00000041643 Il13ra1O09030 424 aa11.62□□□□□ -0.55
Pcif1-201ENSMUST00000041643 Stc1O55183 247 aa11.62□□□□□ -0.55
Pcif1-201ENSMUST00000041643 Itgb1P09055 798 aaKnown RBP11.62□□□□□ -0.55
Pcif1-201ENSMUST00000041643 Aqp4P55088 323 aa11.62□□□□□ -0.55
Pcif1-201ENSMUST00000041643 Cntnap5bQ0V8T8 1292 aa11.62□□□□□ -0.55
Pcif1-201ENSMUST00000041643 Cd163Q2VLH6 1121 aa11.62□□□□□ -0.55
Pcif1-201ENSMUST00000041643 Olfml2bQ3V1G4 746 aa11.62□□□□□ -0.55
Pcif1-201ENSMUST00000041643 Rnf215Q5SPX3 379 aa11.62□□□□□ -0.55
Pcif1-201ENSMUST00000041643 PhgdhQ61753 533 aaKnown RBP11.62□□□□□ -0.55
Pcif1-201ENSMUST00000041643 RgnQ64374 299 aa11.62□□□□□ -0.55
Pcif1-201ENSMUST00000041643 Pi4k2bQ8CBQ5 469 aa11.62□□□□□ -0.55
Pcif1-201ENSMUST00000041643 Sgsm3Q8VCZ6 750 aa11.62□□□□□ -0.55
Pcif1-201ENSMUST00000041643 Diras1Q91Z61 198 aa11.62□□□□□ -0.55
Pcif1-201ENSMUST00000041643 Isl2Q9CXV0 359 aa11.62□□□□□ -0.55
Pcif1-201ENSMUST00000041643 Cmtm8Q9CZR4 173 aa11.62□□□□□ -0.55
Pcif1-201ENSMUST00000041643 Olfr2Q9QWU6 327 aa11.62□□□□□ -0.55
Pcif1-201ENSMUST00000041643 Dctn3Q9Z0Y1 186 aa11.62□□□□□ -0.55
Pcif1-201ENSMUST00000041643 Sult2a7A0A1B0GRF0 313 aa11.62□□□□□ -0.55
Pcif1-201ENSMUST00000041643 CtcflA2APF3 636 aa11.62□□□□□ -0.55
Pcif1-201ENSMUST00000041643 GhrP16882 650 aa11.62□□□□□ -0.55
Pcif1-201ENSMUST00000041643 Gria2P23819 883 aa11.62□□□□□ -0.55
Pcif1-201ENSMUST00000041643 Nr5a2P45448 560 aa11.62□□□□□ -0.55
Pcif1-201ENSMUST00000041643 Kcnj9P48543 393 aa11.62□□□□□ -0.55
Pcif1-201ENSMUST00000041643 Olfr325Q5NCD2 326 aa11.62□□□□□ -0.55
Pcif1-201ENSMUST00000041643 Nt5eQ61503 576 aa11.62□□□□□ -0.55
Pcif1-201ENSMUST00000041643 Sec24dQ6NXL1 1032 aa11.62□□□□□ -0.55
Pcif1-201ENSMUST00000041643 Serpina3aQ6P4P1 422 aa11.62□□□□□ -0.55
Pcif1-201ENSMUST00000041643 Fbxl19Q6PB97 674 aa11.62□□□□□ -0.55
Pcif1-201ENSMUST00000041643 Fam45aQ9D8N2 357 aa11.62□□□□□ -0.55
Pcif1-201ENSMUST00000041643 Armc8Q9DBR3 673 aa11.62□□□□□ -0.55
Pcif1-201ENSMUST00000041643 Rbbp6P97868 1790 aaKnown RBP11.62□□□□□ -0.55
Pcif1-201ENSMUST00000041643 Rad21l1A2AU37 552 aa11.61□□□□□ -0.55
Pcif1-201ENSMUST00000041643 Pxmp2P42925 194 aa11.61□□□□□ -0.55
Pcif1-201ENSMUST00000041643 Ppp3cbP48453 525 aa11.61□□□□□ -0.55
Pcif1-201ENSMUST00000041643 Grm5Q3UVX5 1203 aa11.61□□□□□ -0.55
Pcif1-201ENSMUST00000041643 Cep44Q5HZK1 386 aa11.61□□□□□ -0.55
Pcif1-201ENSMUST00000041643 Trim24Q64127 1051 aaKnown RBP11.61□□□□□ -0.55
Pcif1-201ENSMUST00000041643 Olfr297Q7TS07 310 aa11.61□□□□□ -0.55
Pcif1-201ENSMUST00000041643 Lpcat2Q8BYI6 544 aa11.61□□□□□ -0.55
Pcif1-201ENSMUST00000041643 Tfb1mQ8JZM0 345 aaKnown RBP11.61□□□□□ -0.55
Pcif1-201ENSMUST00000041643 Ccdc80Q8R2G6 949 aa11.61□□□□□ -0.55
Pcif1-201ENSMUST00000041643 Abtb1Q99LJ2 478 aa11.61□□□□□ -0.55
Pcif1-201ENSMUST00000041643 Fam174aQ9D3L0 190 aa11.61□□□□□ -0.55
Pcif1-201ENSMUST00000041643 Cib4Q9D9N5 185 aa11.61□□□□□ -0.55
Pcif1-201ENSMUST00000041643 Lman2Q9DBH5 358 aaKnown RBP11.61□□□□□ -0.55
Pcif1-201ENSMUST00000041643 Olfr705Q9EPF7 316 aa11.61□□□□□ -0.55
Pcif1-201ENSMUST00000041643 Clec1bQ9JL99 229 aa11.61□□□□□ -0.55
Pcif1-201ENSMUST00000041643 St6galnac1Q9QZ39 526 aa11.61□□□□□ -0.55
Pcif1-201ENSMUST00000041643 Gm10718D3Z1I7 227 aa11.61□□□□□ -0.55
Pcif1-201ENSMUST00000041643 Gm20509G3UZF1 325 aa11.61□□□□□ -0.55
Pcif1-201ENSMUST00000041643 Fv4P11370 679 aa11.61□□□□□ -0.55
Pcif1-201ENSMUST00000041643 Chrm1P12657 460 aa11.61□□□□□ -0.55
Pcif1-201ENSMUST00000041643 Dppa5bP85965 119 aa11.61□□□□□ -0.55
Pcif1-201ENSMUST00000041643 Defb48Q3UW22 87 aa11.61□□□□□ -0.55
Pcif1-201ENSMUST00000041643 Cpped1Q8BFS6 312 aa11.61□□□□□ -0.55
Pcif1-201ENSMUST00000041643 Lin7aQ8JZS0 233 aa11.61□□□□□ -0.55
Pcif1-201ENSMUST00000041643 Lyrm1Q9CQB7 122 aa11.61□□□□□ -0.55
Pcif1-201ENSMUST00000041643 Q9D112 206 aa11.61□□□□□ -0.55
Pcif1-201ENSMUST00000041643 Ebna1bp2Q9D903 306 aaKnown RBP11.61□□□□□ -0.55
Pcif1-201ENSMUST00000041643 CtsmQ9JL96 333 aa11.61□□□□□ -0.55
Pcif1-201ENSMUST00000041643 Vps29Q9QZ88 182 aa11.61□□□□□ -0.55
Pcif1-201ENSMUST00000041643 Olfr1188A2AV10 312 aa11.61□□□□□ -0.55
Pcif1-201ENSMUST00000041643 Gm20671F6TVX7 576 aa11.61□□□□□ -0.55
Pcif1-201ENSMUST00000041643 Nfkbil1O88995 381 aa11.61□□□□□ -0.55
Pcif1-201ENSMUST00000041643 C4bpaP08607 469 aa11.61□□□□□ -0.55
Pcif1-201ENSMUST00000041643 Id2P41136 134 aa11.61□□□□□ -0.55
Pcif1-201ENSMUST00000041643 MtpnP62774 118 aa11.61□□□□□ -0.55
Pcif1-201ENSMUST00000041643 B020004J07RikQ3UTC0 476 aa11.61□□□□□ -0.55
Pcif1-201ENSMUST00000041643 Clec4a4Q5YIR8 236 aa11.61□□□□□ -0.55
Pcif1-201ENSMUST00000041643 MogQ61885 246 aa11.61□□□□□ -0.55
Pcif1-201ENSMUST00000041643 Zfp606Q7TSV0 794 aa11.61□□□□□ -0.55
Pcif1-201ENSMUST00000041643 Cxcr1Q810W6 351 aa11.61□□□□□ -0.55
Pcif1-201ENSMUST00000041643 Fam149aQ8CFV2 787 aa11.61□□□□□ -0.55
Pcif1-201ENSMUST00000041643 Rnf144aQ925F3 292 aa11.61□□□□□ -0.55
Pcif1-201ENSMUST00000041643 Cyp4f15Q99N18 534 aa11.61□□□□□ -0.55
Pcif1-201ENSMUST00000041643 Ergic3Q9CQE7 383 aa11.61□□□□□ -0.55
Pcif1-201ENSMUST00000041643 Tbc1d21Q9D9D3 336 aa11.61□□□□□ -0.55
Pcif1-201ENSMUST00000041643 Nacc2Q9DCM7 586 aa11.61□□□□□ -0.55
Pcif1-201ENSMUST00000041643 PyglQ9ET01 850 aa11.61□□□□□ -0.55
Pcif1-201ENSMUST00000041643 Rnf11Q9QYK7 154 aa11.61□□□□□ -0.55
Pcif1-201ENSMUST00000041643 Olfr625-ps1A0A140T8L4 321 aa11.61□□□□□ -0.55
Pcif1-201ENSMUST00000041643 CerklA2AQH1 525 aa11.61□□□□□ -0.55
Pcif1-201ENSMUST00000041643 Fam71f2B2RXB0 297 aa11.61□□□□□ -0.55
Pcif1-201ENSMUST00000041643 Vmn1r176G3UW31 304 aa11.61□□□□□ -0.55
Pcif1-201ENSMUST00000041643 Slc2a7P0C6A1 513 aa11.61□□□□□ -0.55
Pcif1-201ENSMUST00000041643 RxrbP28704 520 aa11.61□□□□□ -0.55
Pcif1-201ENSMUST00000041643 LvrnQ2KHK3 559 aa11.61□□□□□ -0.55
Pcif1-201ENSMUST00000041643 Pik3r3Q64143 461 aa11.61□□□□□ -0.55
Pcif1-201ENSMUST00000041643 Zbtb6Q8K088 423 aa11.61□□□□□ -0.55
Pcif1-201ENSMUST00000041643 Q8VDP2 222 aa11.61□□□□□ -0.55
Retrieved 100 of 22,080 RNA–protein pairs in 33.4 ms