RNA–Protein interactions for RNA: ENST00000635970.1

CLN8-209, Transcript of CLN8, transmembrane ER and ERGIC protein, humanhuman

TSL 5

Gene CLN8, Length 1,958 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN8-209ENST00000635970 DHPSP49366 369 aaPredicted RBP15.14■□□□□ 0.01
CLN8-209ENST00000635970 MRPL19P49406 292 aaKnown RBP15.14■□□□□ 0.01
CLN8-209ENST00000635970 TMBIM6P55061 237 aa15.14■□□□□ 0.01
CLN8-209ENST00000635970 PPP2CBP62714 309 aa15.14■□□□□ 0.01
CLN8-209ENST00000635970 PPP2CAP67775 309 aa15.14■□□□□ 0.01
CLN8-209ENST00000635970 PPP1R3AQ16821 1122 aa15.14■□□□□ 0.01
CLN8-209ENST00000635970 SLC36A4Q6YBV0 504 aa15.14■□□□□ 0.01
CLN8-209ENST00000635970 MIER2Q8N344 545 aa15.14■□□□□ 0.01
CLN8-209ENST00000635970 ZC3H10Q96K80 434 aaKnown RBP15.14■□□□□ 0.01
CLN8-209ENST00000635970 COG8Q96MW5 612 aa15.14■□□□□ 0.01
CLN8-209ENST00000635970 TDRD1Q9BXT4 1180 aaKnown RBP15.14■□□□□ 0.01
CLN8-209ENST00000635970 SGK2Q9HBY8 427 aa15.14■□□□□ 0.01
CLN8-209ENST00000635970 INTS10Q9NVR2 710 aaKnown RBP15.14■□□□□ 0.01
CLN8-209ENST00000635970 SMPD3Q9NY59 655 aaPredicted RBP15.14■□□□□ 0.01
CLN8-209ENST00000635970 AURKCQ9UQB9 309 aa15.14■□□□□ 0.01
CLN8-209ENST00000635970 FIS1Q9Y3D6 152 aa15.14■□□□□ 0.01
CLN8-209ENST00000635970 SAC3D1A6NKF1 404 aa15.13■□□□□ 0.01
CLN8-209ENST00000635970 MAGEB3O15480 346 aa15.13■□□□□ 0.01
CLN8-209ENST00000635970 SPINT1O43278 529 aa15.13■□□□□ 0.01
CLN8-209ENST00000635970 INHBBP09529 407 aa15.13■□□□□ 0.01
CLN8-209ENST00000635970 JUNBP17275 347 aaPredicted RBP15.13■□□□□ 0.01
CLN8-209ENST00000635970 NELFEP18615 380 aaKnown RBP15.13■□□□□ 0.01
CLN8-209ENST00000635970 MAPK8P45983 427 aa15.13■□□□□ 0.01
CLN8-209ENST00000635970 HLCSP50747 726 aa15.13■□□□□ 0.01
CLN8-209ENST00000635970 SEMG2Q02383 582 aa15.13■□□□□ 0.01
CLN8-209ENST00000635970 ZNF678Q5SXM1 525 aa15.13■□□□□ 0.01
CLN8-209ENST00000635970 PTRH1Q86Y79 214 aaKnown RBP15.13■□□□□ 0.01
CLN8-209ENST00000635970 EPHX4Q8IUS5 362 aa15.13■□□□□ 0.01
CLN8-209ENST00000635970 SLC15A3Q8IY34 581 aa15.13■□□□□ 0.01
CLN8-209ENST00000635970 ZNF641Q96N77 438 aaPredicted RBP15.13■□□□□ 0.01
CLN8-209ENST00000635970 C1orf50Q9BV19 199 aa15.13■□□□□ 0.01
CLN8-209ENST00000635970 PAIP1Q9H074 479 aaKnown RBP15.13■□□□□ 0.01
CLN8-209ENST00000635970 ARNT2Q9HBZ2 717 aa15.13■□□□□ 0.01
CLN8-209ENST00000635970 MAGEE1Q9HCI5 957 aa15.13■□□□□ 0.01
CLN8-209ENST00000635970 TMEM45AQ9NWC5 275 aa15.13■□□□□ 0.01
CLN8-209ENST00000635970 FADS3Q9Y5Q0 445 aa15.13■□□□□ 0.01
CLN8-209ENST00000635970 RALGAPA1Q6GYQ0 2036 aa15.13■□□□□ 0.01
CLN8-209ENST00000635970 TBC1D3DA0A087WVF3 549 aa15.13■□□□□ 0.01
CLN8-209ENST00000635970 TBC1D3IA0A087WXS9 549 aa15.13■□□□□ 0.01
CLN8-209ENST00000635970 TBC1D3EA0A087X179 549 aa15.13■□□□□ 0.01
CLN8-209ENST00000635970 TBC1D3KA0A087X1G2 549 aa15.13■□□□□ 0.01
CLN8-209ENST00000635970 TBC1D3FA6NER0 549 aaPredicted RBP15.13■□□□□ 0.01
CLN8-209ENST00000635970 NEMP2A6NFY4 417 aa15.13■□□□□ 0.01
CLN8-209ENST00000635970 TBC1D3LB9A6J9 549 aa15.13■□□□□ 0.01
CLN8-209ENST00000635970 NME4O00746 187 aa15.13■□□□□ 0.01
CLN8-209ENST00000635970 TBC1D3HP0C7X1 549 aa15.13■□□□□ 0.01
CLN8-209ENST00000635970 NAA20P61599 178 aa15.13■□□□□ 0.01
CLN8-209ENST00000635970 RAB39AQ14964 217 aa15.13■□□□□ 0.01
CLN8-209ENST00000635970 KIF19Q2TAC6 998 aa15.13■□□□□ 0.01
CLN8-209ENST00000635970 CCNYL2Q5T2Q4 361 aa15.13■□□□□ 0.01
CLN8-209ENST00000635970 TBC1D3GQ6DHY5 549 aa15.13■□□□□ 0.01
CLN8-209ENST00000635970 TBC1D3CQ6IPX1 549 aa15.13■□□□□ 0.01
CLN8-209ENST00000635970 LAYNQ6UX15 382 aa15.13■□□□□ 0.01
CLN8-209ENST00000635970 RANBP10Q6VN20 620 aa15.13■□□□□ 0.01
CLN8-209ENST00000635970 C11orf74Q86VG3 221 aa15.13■□□□□ 0.01
CLN8-209ENST00000635970 ADGRG5Q8IZF4 528 aa15.13■□□□□ 0.01
CLN8-209ENST00000635970 TBC1D3Q8IZP1 549 aaPredicted RBP15.13■□□□□ 0.01
CLN8-209ENST00000635970 SPATA6LQ8N4H0 392 aa15.13■□□□□ 0.01
CLN8-209ENST00000635970 PAF1Q8N7H5 531 aa15.13■□□□□ 0.01
CLN8-209ENST00000635970 IPMKQ8NFU5 416 aa15.13■□□□□ 0.01
CLN8-209ENST00000635970 SPATA22Q8NHS9 363 aa15.13■□□□□ 0.01
CLN8-209ENST00000635970 TBC1D15Q8TC07 691 aa15.13■□□□□ 0.01
CLN8-209ENST00000635970 SNRNP27Q8WVK2 155 aaKnown RBP15.13■□□□□ 0.01
CLN8-209ENST00000635970 TRUB1Q8WWH5 349 aaKnown RBP15.13■□□□□ 0.01
CLN8-209ENST00000635970 ECHDC3Q96DC8 303 aa15.13■□□□□ 0.01
CLN8-209ENST00000635970 NRBF2Q96F24 287 aa15.13■□□□□ 0.01
CLN8-209ENST00000635970 PLEKHA8Q96JA3 519 aa15.13■□□□□ 0.01
CLN8-209ENST00000635970 FICDQ9BVA6 458 aa15.13■□□□□ 0.01
CLN8-209ENST00000635970 FSD1LQ9BXM9 530 aa15.13■□□□□ 0.01
CLN8-209ENST00000635970 MAP10Q9P2G4 905 aa15.13■□□□□ 0.01
CLN8-209ENST00000635970 CDC14AQ9UNH5 594 aa15.13■□□□□ 0.01
CLN8-209ENST00000635970 PCDHB9Q9Y5E1 797 aa15.13■□□□□ 0.01
CLN8-209ENST00000635970 RAI2Q9Y5P3 530 aa15.13■□□□□ 0.01
CLN8-209ENST00000635970 TRPM6Q9BX84 2022 aa15.12■□□□□ 0.01
CLN8-209ENST00000635970 GON4LQ3T8J9 2241 aa15.12■□□□□ 0.01
CLN8-209ENST00000635970 TP53BP1Q12888 1972 aaPredicted RBP15.12■□□□□ 0.01
CLN8-209ENST00000635970 LOC107983988A0A1B0GUW6 1196 aaPredicted RBP15.12■□□□□ 0.01
CLN8-209ENST00000635970 TSPAN11A1L157 253 aa15.12■□□□□ 0.01
CLN8-209ENST00000635970 SLC7A4O43246 635 aa15.12■□□□□ 0.01
CLN8-209ENST00000635970 ATE1O95260 518 aa15.12■□□□□ 0.01
CLN8-209ENST00000635970 CPNE6O95741 557 aa15.12■□□□□ 0.01
CLN8-209ENST00000635970 MT-CYBP00156 380 aaPredicted RBP15.12■□□□□ 0.01
CLN8-209ENST00000635970 TIMP2P16035 220 aa15.12■□□□□ 0.01
CLN8-209ENST00000635970 MAOBP27338 520 aa15.12■□□□□ 0.01
CLN8-209ENST00000635970 HERVK_113P63132 956 aa15.12■□□□□ 0.01
CLN8-209ENST00000635970 PMS2P3Q13401 168 aa15.12■□□□□ 0.01
CLN8-209ENST00000635970 UGT3A2Q3SY77 523 aa15.12■□□□□ 0.01
CLN8-209ENST00000635970 USP51Q70EK9 711 aa15.12■□□□□ 0.01
CLN8-209ENST00000635970 SNX19Q92543 992 aa15.12■□□□□ 0.01
CLN8-209ENST00000635970 BIRC7Q96CA5 298 aa15.12■□□□□ 0.01
CLN8-209ENST00000635970 IMP4Q96G21 291 aaKnown RBP15.12■□□□□ 0.01
CLN8-209ENST00000635970 PHF12Q96QT6 1004 aa15.12■□□□□ 0.01
CLN8-209ENST00000635970 ERVK-6Q9BXR3 956 aa15.12■□□□□ 0.01
CLN8-209ENST00000635970 CYP4F12Q9HCS2 524 aa15.12■□□□□ 0.01
CLN8-209ENST00000635970 DKK3Q9UBP4 350 aa15.12■□□□□ 0.01
CLN8-209ENST00000635970 ZNF639Q9UID6 485 aa15.12■□□□□ 0.01
CLN8-209ENST00000635970 RAB23Q9ULC3 237 aa15.12■□□□□ 0.01
CLN8-209ENST00000635970 VWA7Q9Y334 891 aa15.12■□□□□ 0.01
CLN8-209ENST00000635970 PCDHGA4Q9Y5G9 962 aa15.12■□□□□ 0.01
CLN8-209ENST00000635970 SLCO1B1Q9Y6L6 691 aa15.12■□□□□ 0.01
Retrieved 100 of 20,778 RNA–protein pairs in 31.4 ms