RNA–Protein interactions for RNA: ENST00000625299.1

PNKP-218, Transcript of polynucleotide kinase 3'-phosphatase, humanhuman

TSL 5

Gene PNKP, Length 428 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PNKP-218ENST00000625299 IGLV3-16A0A075B6K0 115 aa14.08□□□□□ -0.16
PNKP-218ENST00000625299 DYTNA2CJ06 578 aa14.08□□□□□ -0.16
PNKP-218ENST00000625299 H7C0C1 242 aa14.08□□□□□ -0.16
PNKP-218ENST00000625299 DSCR3O14972 297 aa14.08□□□□□ -0.16
PNKP-218ENST00000625299 UNC5CO95185 931 aa14.08□□□□□ -0.16
PNKP-218ENST00000625299 F10P00742 488 aa14.08□□□□□ -0.16
PNKP-218ENST00000625299 ALBP02768 609 aa14.08□□□□□ -0.16
PNKP-218ENST00000625299 TPBGLP0DKB5 382 aa14.08□□□□□ -0.16
PNKP-218ENST00000625299 PSMB4P28070 264 aa14.08□□□□□ -0.16
PNKP-218ENST00000625299 RBL1P28749 1068 aa14.08□□□□□ -0.16
PNKP-218ENST00000625299 SLC1A1P43005 524 aa14.08□□□□□ -0.16
PNKP-218ENST00000625299 OR1D4P47884 311 aa14.08□□□□□ -0.16
PNKP-218ENST00000625299 ATP5OP48047 213 aa14.08□□□□□ -0.16
PNKP-218ENST00000625299 TDGF1P3P51864 188 aa14.08□□□□□ -0.16
PNKP-218ENST00000625299 IQCB1Q15051 598 aa14.08□□□□□ -0.16
PNKP-218ENST00000625299 GPR33Q49SQ1 333 aa14.08□□□□□ -0.16
PNKP-218ENST00000625299 RPUSD3Q6P087 351 aaKnown RBP14.08□□□□□ -0.16
PNKP-218ENST00000625299 RANBP10Q6VN20 620 aa14.08□□□□□ -0.16
PNKP-218ENST00000625299 BNC2Q6ZN30 1099 aaPredicted RBP14.08□□□□□ -0.16
PNKP-218ENST00000625299 TAX1BP1Q86VP1 789 aa14.08□□□□□ -0.16
PNKP-218ENST00000625299 MCATQ8IVS2 390 aaKnown RBP14.08□□□□□ -0.16
PNKP-218ENST00000625299 PRSS58Q8IYP2 241 aa14.08□□□□□ -0.16
PNKP-218ENST00000625299 TBC1D21Q8IYX1 336 aa14.08□□□□□ -0.16
PNKP-218ENST00000625299 C2orf73Q8N5S3 287 aaPredicted RBP14.08□□□□□ -0.16
PNKP-218ENST00000625299 CCDC110Q8TBZ0 833 aa14.08□□□□□ -0.16
PNKP-218ENST00000625299 DENND1AQ8TEH3 1009 aa14.08□□□□□ -0.16
PNKP-218ENST00000625299 NR4A3Q92570 626 aa14.08□□□□□ -0.16
PNKP-218ENST00000625299 DNAJC1Q96KC8 554 aaKnown RBP14.08□□□□□ -0.16
PNKP-218ENST00000625299 TAAR6Q96RI8 345 aa14.08□□□□□ -0.16
PNKP-218ENST00000625299 CRB3Q9BUF7 120 aa14.08□□□□□ -0.16
PNKP-218ENST00000625299 CHST11Q9NPF2 352 aa14.08□□□□□ -0.16
PNKP-218ENST00000625299 SEMA3GQ9NS98 782 aa14.08□□□□□ -0.16
PNKP-218ENST00000625299 SMARCAL1Q9NZC9 954 aa14.08□□□□□ -0.16
PNKP-218ENST00000625299 CAMSAP3Q9P1Y5 1249 aaPredicted RBP14.08□□□□□ -0.16
PNKP-218ENST00000625299 PTGFRNQ9P2B2 879 aa14.08□□□□□ -0.16
PNKP-218ENST00000625299 NXT1Q9UKK6 140 aaKnown RBP14.08□□□□□ -0.16
PNKP-218ENST00000625299 MAU2Q9Y6X3 613 aa14.08□□□□□ -0.16
PNKP-218ENST00000625299 MED13LQ71F56 2210 aa14.08□□□□□ -0.16
PNKP-218ENST00000625299 DCHS2Q6V1P9 2916 aa14.08□□□□□ -0.16
PNKP-218ENST00000625299 HACD1B0YJ81 288 aa14.07□□□□□ -0.16
PNKP-218ENST00000625299 MAP2K7O14733 419 aa14.07□□□□□ -0.16
PNKP-218ENST00000625299 LIN7AO14910 233 aaPredicted RBP14.07□□□□□ -0.16
PNKP-218ENST00000625299 ACPPP15309 386 aa14.07□□□□□ -0.16
PNKP-218ENST00000625299 ADRA1AP35348 466 aa14.07□□□□□ -0.16
PNKP-218ENST00000625299 GRIA3P42263 894 aa14.07□□□□□ -0.16
PNKP-218ENST00000625299 GCGRP47871 477 aa14.07□□□□□ -0.16
PNKP-218ENST00000625299 CSE1LP55060 971 aaKnown RBP14.07□□□□□ -0.16
PNKP-218ENST00000625299 SPARCL1Q14515 664 aa14.07□□□□□ -0.16
PNKP-218ENST00000625299 PRPSAP1Q14558 356 aa14.07□□□□□ -0.16
PNKP-218ENST00000625299 KIR2DS3Q14952 304 aa14.07□□□□□ -0.16
PNKP-218ENST00000625299 TAZQ16635 292 aa14.07□□□□□ -0.16
PNKP-218ENST00000625299 ZNF630Q2M218 657 aaPredicted RBP14.07□□□□□ -0.16
PNKP-218ENST00000625299 TFDP3Q5H9I0 405 aa14.07□□□□□ -0.16
PNKP-218ENST00000625299 ZNF324BQ6AW86 544 aaPredicted RBP14.07□□□□□ -0.16
PNKP-218ENST00000625299 TMEM207Q6UWW9 146 aa14.07□□□□□ -0.16
PNKP-218ENST00000625299 RHOT2Q8IXI1 618 aa14.07□□□□□ -0.16
PNKP-218ENST00000625299 ZNF808Q8N4W9 903 aaPredicted RBP14.07□□□□□ -0.16
PNKP-218ENST00000625299 DTWD1Q8N5C7 304 aa14.07□□□□□ -0.16
PNKP-218ENST00000625299 LMNTD1Q8N9Z9 388 aa14.07□□□□□ -0.16
PNKP-218ENST00000625299 TTC29Q8NA56 475 aaPredicted RBP14.07□□□□□ -0.16
PNKP-218ENST00000625299 OR5K2Q8NHB8 316 aa14.07□□□□□ -0.16
PNKP-218ENST00000625299 C8orf44Q96CB5 159 aa14.07□□□□□ -0.16
PNKP-218ENST00000625299 LMF1Q96S06 567 aa14.07□□□□□ -0.16
PNKP-218ENST00000625299 SLC26A1Q9H2B4 701 aa14.07□□□□□ -0.16
PNKP-218ENST00000625299 SPTLC3Q9NUV7 552 aa14.07□□□□□ -0.16
PNKP-218ENST00000625299 CIDEBQ9UHD4 219 aa14.07□□□□□ -0.16
PNKP-218ENST00000625299 AAR2Q9Y312 384 aaKnown RBP14.07□□□□□ -0.16
PNKP-218ENST00000625299 PRSS21Q9Y6M0 314 aa14.07□□□□□ -0.16
PNKP-218ENST00000625299 TACC2O95359 2948 aa14.07□□□□□ -0.16
PNKP-218ENST00000625299 ITPR3Q14573 2671 aa14.06□□□□□ -0.16
PNKP-218ENST00000625299 PCNX1Q96RV3 2341 aa14.06□□□□□ -0.16
PNKP-218ENST00000625299 hCG_1818297A0A087WSY0 165 aa14.06□□□□□ -0.16
PNKP-218ENST00000625299 TRAV17A0A0B4J275 112 aa14.06□□□□□ -0.16
PNKP-218ENST00000625299 MACROD2A1Z1Q3 448 aa14.06□□□□□ -0.16
PNKP-218ENST00000625299 KDM1AO60341 852 aa14.06□□□□□ -0.16
PNKP-218ENST00000625299 HPP00738 406 aa14.06□□□□□ -0.16
PNKP-218ENST00000625299 GSTM1P09488 218 aa14.06□□□□□ -0.16
PNKP-218ENST00000625299 ACADLP28330 430 aa14.06□□□□□ -0.16
PNKP-218ENST00000625299 GSTM4Q03013 218 aa14.06□□□□□ -0.16
PNKP-218ENST00000625299 GRM7Q14831 915 aa14.06□□□□□ -0.16
PNKP-218ENST00000625299 DBN1Q16643 649 aa14.06□□□□□ -0.16
PNKP-218ENST00000625299 CCDC181Q5TID7 509 aa14.06□□□□□ -0.16
PNKP-218ENST00000625299 ARHGEF18Q6ZSZ5 1173 aa14.06□□□□□ -0.16
PNKP-218ENST00000625299 LUZP1Q86V48 1076 aa14.06□□□□□ -0.16
PNKP-218ENST00000625299 SIRT6Q8N6T7 355 aa14.06□□□□□ -0.16
PNKP-218ENST00000625299 TBL1YQ9BQ87 522 aa14.06□□□□□ -0.16
PNKP-218ENST00000625299 TRIM56Q9BRZ2 755 aaKnown RBP14.06□□□□□ -0.16
PNKP-218ENST00000625299 HEMGNQ9BXL5 484 aa14.06□□□□□ -0.16
PNKP-218ENST00000625299 TRIM8Q9BZR9 551 aa14.06□□□□□ -0.16
PNKP-218ENST00000625299 CSTF2TQ9H0L4 616 aaKnown RBP eCLIP14.06□□□□□ -0.16
PNKP-218ENST00000625299 TRBV5-4A0A0C4DH59 114 aa14.05□□□□□ -0.16
PNKP-218ENST00000625299 PSTPIP1O43586 416 aa14.05□□□□□ -0.16
PNKP-218ENST00000625299 AP2A2O94973 939 aa14.05□□□□□ -0.16
PNKP-218ENST00000625299 AP2A1O95782 977 aa14.05□□□□□ -0.16
PNKP-218ENST00000625299 FTH1P02794 183 aa14.05□□□□□ -0.16
PNKP-218ENST00000625299 PKLRP30613 574 aa14.05□□□□□ -0.16
PNKP-218ENST00000625299 TNFSF10P50591 281 aa14.05□□□□□ -0.16
PNKP-218ENST00000625299 KLC1Q07866 573 aa14.05□□□□□ -0.16
PNKP-218ENST00000625299 MSLNQ13421 630 aaPredicted RBP14.05□□□□□ -0.16
PNKP-218ENST00000625299 INAQ16352 499 aa14.05□□□□□ -0.16
Retrieved 100 of 20,778 RNA–protein pairs in 25.5 ms